RNA–Protein interactions for RNA: ENST00000415782.1

LAMB3-204, Transcript of laminin subunit beta 3, humanhuman

TSL 2

Gene LAMB3, Length 908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMB3-204ENST00000415782 NISCHQ9Y2I1 1504 aa35.5■■■■□ 3.27
LAMB3-204ENST00000415782 CCDC180Q9P1Z9 1646 aa31.78■■■□□ 2.68
LAMB3-204ENST00000415782 ABCC9O60706 1549 aa31.69■■■□□ 2.66
LAMB3-204ENST00000415782 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
LAMB3-204ENST00000415782 NACADO15069 1562 aa29.96■■■□□ 2.39
LAMB3-204ENST00000415782 DCAF8L2P0C7V8 631 aa29.87■■■□□ 2.37
LAMB3-204ENST00000415782 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
LAMB3-204ENST00000415782 DNAJC5BQ9UF47 199 aa29.6■■■□□ 2.33
LAMB3-204ENST00000415782 MYO15BQ96JP2 1530 aa29.55■■■□□ 2.32
LAMB3-204ENST00000415782 PABPN1Q86U42 306 aaKnown RBP eCLIP29.52■■■□□ 2.32
LAMB3-204ENST00000415782 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
LAMB3-204ENST00000415782 BICRAQ9NZM4 1560 aa29.37■■■□□ 2.29
LAMB3-204ENST00000415782 DCAF1Q9Y4B6 1507 aa29.26■■■□□ 2.27
LAMB3-204ENST00000415782 SCRIBQ14160 1630 aa29.07■■■□□ 2.24
LAMB3-204ENST00000415782 SHROOM4Q9ULL8 1493 aa28.78■■■□□ 2.2
LAMB3-204ENST00000415782 CC2D2AQ9P2K1 1620 aa28.63■■■□□ 2.17
LAMB3-204ENST00000415782 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
LAMB3-204ENST00000415782 CECR2Q9BXF3 1484 aa28.47■■■□□ 2.15
LAMB3-204ENST00000415782 SMARCA4P51532 1647 aa27.7■■■□□ 2.02
LAMB3-204ENST00000415782 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
LAMB3-204ENST00000415782 ATAD2BQ9ULI0 1458 aa27.64■■■□□ 2.02
LAMB3-204ENST00000415782 SMARCA2P51531 1590 aa27.52■■■□□ 2
LAMB3-204ENST00000415782 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
LAMB3-204ENST00000415782 HMGXB3Q12766 1538 aa27.49■■□□□ 1.99
LAMB3-204ENST00000415782 MROH2BQ7Z745 1585 aa27.43■■□□□ 1.98
LAMB3-204ENST00000415782 PEG3Q9GZU2 1588 aa27.37■■□□□ 1.97
LAMB3-204ENST00000415782 BAZ1BQ9UIG0 1483 aaKnown RBP27.37■■□□□ 1.97
LAMB3-204ENST00000415782 NESP48681 1621 aa27.3■■□□□ 1.96
LAMB3-204ENST00000415782 ERCC6Q03468 1493 aa27.26■■□□□ 1.95
LAMB3-204ENST00000415782 WIZO95785 1651 aa27.14■■□□□ 1.94
LAMB3-204ENST00000415782 CUX2O14529 1486 aa27.13■■□□□ 1.93
LAMB3-204ENST00000415782 LAMC3Q9Y6N6 1575 aa27.02■■□□□ 1.92
LAMB3-204ENST00000415782 KIF21AQ7Z4S6 1674 aa26.98■■□□□ 1.91
LAMB3-204ENST00000415782 THOC2Q8NI27 1593 aaKnown RBP26.98■■□□□ 1.91
LAMB3-204ENST00000415782 DNAJC5Q9H3Z4 198 aa26.92■■□□□ 1.9
LAMB3-204ENST00000415782 RSF1Q96T23 1441 aaPredicted RBP26.86■■□□□ 1.89
LAMB3-204ENST00000415782 CADPSQ9ULU8 1353 aa26.82■■□□□ 1.88
LAMB3-204ENST00000415782 PDS5BQ9NTI5 1447 aa26.8■■□□□ 1.88
LAMB3-204ENST00000415782 TOP2AP11388 1531 aaKnown RBP26.73■■□□□ 1.87
LAMB3-204ENST00000415782 MRC2Q9UBG0 1479 aa26.64■■□□□ 1.86
LAMB3-204ENST00000415782 WDR62O43379 1518 aa26.6■■□□□ 1.85
LAMB3-204ENST00000415782 CFTRP13569 1480 aa26.57■■□□□ 1.84
LAMB3-204ENST00000415782 FANCD2Q9BXW9 1451 aa26.56■■□□□ 1.84
LAMB3-204ENST00000415782 CEP164Q9UPV0 1460 aa26.56■■□□□ 1.84
LAMB3-204ENST00000415782 CCDC88BA6NC98 1476 aa26.43■■□□□ 1.82
LAMB3-204ENST00000415782 PRDM2Q13029 1718 aa26.42■■□□□ 1.82
LAMB3-204ENST00000415782 URB2Q14146 1524 aaKnown RBP26.39■■□□□ 1.81
LAMB3-204ENST00000415782 TOPBP1Q92547 1522 aa26.1■■□□□ 1.77
LAMB3-204ENST00000415782 ZNF608Q9ULD9 1512 aaPredicted RBP26.05■■□□□ 1.76
LAMB3-204ENST00000415782 DNMBPQ6XZF7 1577 aa26■■□□□ 1.75
LAMB3-204ENST00000415782 IFT140Q96RY7 1462 aa25.99■■□□□ 1.75
LAMB3-204ENST00000415782 ABCC8Q09428 1581 aa25.92■■□□□ 1.74
LAMB3-204ENST00000415782 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
LAMB3-204ENST00000415782 TRIM41Q8WV44 630 aa25.89■■□□□ 1.74
LAMB3-204ENST00000415782 TARBP1Q13395 1621 aaKnown RBP25.88■■□□□ 1.73
LAMB3-204ENST00000415782 OSCARQ8IYS5 282 aa25.87■■□□□ 1.73
LAMB3-204ENST00000415782 POLA1P09884 1462 aaPredicted RBP25.85■■□□□ 1.73
LAMB3-204ENST00000415782 AQRO60306 1485 aaKnown RBP eCLIP25.8■■□□□ 1.72
LAMB3-204ENST00000415782 SUPT5HO00267 1087 aaKnown RBP25.8■■□□□ 1.72
LAMB3-204ENST00000415782 RAD54L2Q9Y4B4 1467 aa25.79■■□□□ 1.72
LAMB3-204ENST00000415782 CUX1P39880 1505 aa25.75■■□□□ 1.71
LAMB3-204ENST00000415782 CHD1O14646 1710 aa25.73■■□□□ 1.71
LAMB3-204ENST00000415782 FGD5Q6ZNL6 1462 aa25.72■■□□□ 1.71
LAMB3-204ENST00000415782 RIMBP3CA6NJZ7 1639 aa25.69■■□□□ 1.7
LAMB3-204ENST00000415782 RIMBP3BA6NNM3 1639 aa25.69■■□□□ 1.7
LAMB3-204ENST00000415782 RIMBP3Q9UFD9 1639 aa25.69■■□□□ 1.7
LAMB3-204ENST00000415782 SOGA1O94964 1423 aa25.68■■□□□ 1.7
LAMB3-204ENST00000415782 TDRD9Q8NDG6 1382 aaKnown RBP25.65■■□□□ 1.7
LAMB3-204ENST00000415782 WDR97A6NE52 1622 aa25.59■■□□□ 1.69
LAMB3-204ENST00000415782 ARHGEF11O15085 1522 aa25.58■■□□□ 1.68
LAMB3-204ENST00000415782 SNAPC4Q5SXM2 1469 aa25.55■■□□□ 1.68
LAMB3-204ENST00000415782 FBLN2P98095 1184 aa25.54■■□□□ 1.68
LAMB3-204ENST00000415782 PBRM1Q86U86 1689 aa25.47■■□□□ 1.67
LAMB3-204ENST00000415782 GRIN2BQ13224 1484 aa25.43■■□□□ 1.66
LAMB3-204ENST00000415782 ABCA5Q8WWZ7 1642 aa25.41■■□□□ 1.66
LAMB3-204ENST00000415782 MAGI1Q96QZ7 1491 aaPredicted RBP25.4■■□□□ 1.66
LAMB3-204ENST00000415782 ABCA10Q8WWZ4 1543 aa25.39■■□□□ 1.66
LAMB3-204ENST00000415782 SYNJ1O43426 1573 aa25.39■■□□□ 1.65
LAMB3-204ENST00000415782 GAPVD1Q14C86 1478 aa25.38■■□□□ 1.65
LAMB3-204ENST00000415782 CLASP1Q7Z460 1538 aa25.37■■□□□ 1.65
LAMB3-204ENST00000415782 ARAP1Q96P48 1450 aa25.37■■□□□ 1.65
LAMB3-204ENST00000415782 BIVM-ERCC5R4GMW8 1640 aa25.37■■□□□ 1.65
LAMB3-204ENST00000415782 SYNJ2O15056 1496 aa25.34■■□□□ 1.65
LAMB3-204ENST00000415782 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
LAMB3-204ENST00000415782 CYB5RLQ6IPT4 315 aa25.33■■□□□ 1.65
LAMB3-204ENST00000415782 CHMP7Q8WUX9 453 aaPredicted RBP25.33■■□□□ 1.65
LAMB3-204ENST00000415782 WRNQ14191 1432 aaPredicted RBP eCLIP25.3■■□□□ 1.64
LAMB3-204ENST00000415782 ADAMTS12P58397 1594 aa25.2■■□□□ 1.62
LAMB3-204ENST00000415782 GRIN2AQ12879 1464 aa25.15■■□□□ 1.62
LAMB3-204ENST00000415782 CEP170Q5SW79 1584 aa25.12■■□□□ 1.61
LAMB3-204ENST00000415782 ERCC6L2Q5T890 1561 aa25.09■■□□□ 1.61
LAMB3-204ENST00000415782 ERICH3Q5RHP9 1530 aa25.06■■□□□ 1.6
LAMB3-204ENST00000415782 FHAD1B1AJZ9 1412 aa25.04■■□□□ 1.6
LAMB3-204ENST00000415782 NUP160Q12769 1436 aa25.04■■□□□ 1.6
LAMB3-204ENST00000415782 TRHP20396 242 aaPredicted RBP24.98■■□□□ 1.59
LAMB3-204ENST00000415782 SHROOM2Q13796 1616 aa24.95■■□□□ 1.58
LAMB3-204ENST00000415782 RUSC2Q8N2Y8 1516 aa24.85■■□□□ 1.57
LAMB3-204ENST00000415782 IGF1RP08069 1367 aa24.79■■□□□ 1.56
LAMB3-204ENST00000415782 PRG4Q92954 1404 aaPredicted RBP24.78■■□□□ 1.56
LAMB3-204ENST00000415782 KIF27Q86VH2 1401 aa24.78■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms