RNA–Protein interactions for RNA: ENST00000415763.5

COL20A1-202, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 5

Gene COL20A1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-202ENST00000415763 NISCHQ9Y2I1 1504 aa48.18■■■■■ 5.3
COL20A1-202ENST00000415763 CCDC180Q9P1Z9 1646 aa42.81■■■■■ 4.44
COL20A1-202ENST00000415763 ABCC9O60706 1549 aa42.41■■■■■ 4.38
COL20A1-202ENST00000415763 RB1CC1Q8TDY2 1594 aa40.5■■■■■ 4.07
COL20A1-202ENST00000415763 DCAF8L2P0C7V8 631 aa40.42■■■■■ 4.06
COL20A1-202ENST00000415763 NACADO15069 1562 aa40.4■■■■■ 4.06
COL20A1-202ENST00000415763 ZCCHC6Q5VYS8 1495 aaKnown RBP40.07■■■■■ 4
COL20A1-202ENST00000415763 MYO15BQ96JP2 1530 aa40.05■■■■■ 4
COL20A1-202ENST00000415763 DCAF1Q9Y4B6 1507 aa39.78■■■■□ 3.96
COL20A1-202ENST00000415763 PABPN1Q86U42 306 aaKnown RBP eCLIP39.66■■■■□ 3.94
COL20A1-202ENST00000415763 UNC13AQ9UPW8 1703 aa39.6■■■■□ 3.93
COL20A1-202ENST00000415763 BICRAQ9NZM4 1560 aa39.45■■■■□ 3.91
COL20A1-202ENST00000415763 DNAJC5BQ9UF47 199 aa39.43■■■■□ 3.9
COL20A1-202ENST00000415763 SCRIBQ14160 1630 aa39.17■■■■□ 3.86
COL20A1-202ENST00000415763 SHROOM4Q9ULL8 1493 aa38.79■■■■□ 3.8
COL20A1-202ENST00000415763 EIF4G1Q04637 1599 aaKnown RBP38.36■■■■□ 3.73
COL20A1-202ENST00000415763 CC2D2AQ9P2K1 1620 aa38.28■■■■□ 3.72
COL20A1-202ENST00000415763 CECR2Q9BXF3 1484 aa38.1■■■■□ 3.69
COL20A1-202ENST00000415763 SMARCA4P51532 1647 aa37.41■■■■□ 3.58
COL20A1-202ENST00000415763 NCAPD3P42695 1498 aa37.37■■■■□ 3.57
COL20A1-202ENST00000415763 ATAD2BQ9ULI0 1458 aa37.37■■■■□ 3.57
COL20A1-202ENST00000415763 BAZ1AQ9NRL2 1556 aaPredicted RBP37.28■■■■□ 3.56
COL20A1-202ENST00000415763 MROH2BQ7Z745 1585 aa37.19■■■■□ 3.54
COL20A1-202ENST00000415763 SMARCA2P51531 1590 aa37.17■■■■□ 3.54
COL20A1-202ENST00000415763 HMGXB3Q12766 1538 aa37.07■■■■□ 3.53
COL20A1-202ENST00000415763 PEG3Q9GZU2 1588 aa37.05■■■■□ 3.52
COL20A1-202ENST00000415763 BAZ1BQ9UIG0 1483 aaKnown RBP36.96■■■■□ 3.51
COL20A1-202ENST00000415763 WIZO95785 1651 aa36.72■■■■□ 3.47
COL20A1-202ENST00000415763 RSF1Q96T23 1441 aaPredicted RBP36.66■■■■□ 3.46
COL20A1-202ENST00000415763 NESP48681 1621 aa36.66■■■■□ 3.46
COL20A1-202ENST00000415763 ERCC6Q03468 1493 aa36.46■■■■□ 3.43
COL20A1-202ENST00000415763 LAMC3Q9Y6N6 1575 aa36.33■■■■□ 3.41
COL20A1-202ENST00000415763 CADPSQ9ULU8 1353 aa36.27■■■■□ 3.4
COL20A1-202ENST00000415763 TOP2AP11388 1531 aaKnown RBP36.26■■■■□ 3.4
COL20A1-202ENST00000415763 CUX2O14529 1486 aa36.2■■■■□ 3.39
COL20A1-202ENST00000415763 PDS5BQ9NTI5 1447 aa36.13■■■■□ 3.37
COL20A1-202ENST00000415763 KIF21AQ7Z4S6 1674 aa36.06■■■■□ 3.36
COL20A1-202ENST00000415763 THOC2Q8NI27 1593 aaKnown RBP36.06■■■■□ 3.36
COL20A1-202ENST00000415763 CFTRP13569 1480 aa35.99■■■■□ 3.35
COL20A1-202ENST00000415763 CCDC88BA6NC98 1476 aa35.92■■■■□ 3.34
COL20A1-202ENST00000415763 FANCD2Q9BXW9 1451 aa35.84■■■■□ 3.33
COL20A1-202ENST00000415763 MRC2Q9UBG0 1479 aa35.8■■■■□ 3.32
COL20A1-202ENST00000415763 CEP164Q9UPV0 1460 aa35.77■■■■□ 3.32
COL20A1-202ENST00000415763 WDR62O43379 1518 aa35.7■■■■□ 3.31
COL20A1-202ENST00000415763 DNAJC5Q9H3Z4 198 aa35.61■■■■□ 3.29
COL20A1-202ENST00000415763 URB2Q14146 1524 aaKnown RBP35.56■■■■□ 3.28
COL20A1-202ENST00000415763 SUPT5HO00267 1087 aaKnown RBP35.48■■■■□ 3.27
COL20A1-202ENST00000415763 PRDM2Q13029 1718 aa35.45■■■■□ 3.27
COL20A1-202ENST00000415763 TOPBP1Q92547 1522 aa35.23■■■■□ 3.23
COL20A1-202ENST00000415763 DNMBPQ6XZF7 1577 aa35.1■■■■□ 3.21
COL20A1-202ENST00000415763 ABCC8Q09428 1581 aa35.08■■■■□ 3.21
COL20A1-202ENST00000415763 IFT140Q96RY7 1462 aa35.04■■■■□ 3.2
COL20A1-202ENST00000415763 ZNF608Q9ULD9 1512 aaPredicted RBP35.04■■■■□ 3.2
COL20A1-202ENST00000415763 POLA1P09884 1462 aaPredicted RBP34.92■■■■□ 3.18
COL20A1-202ENST00000415763 CUX1P39880 1505 aa34.89■■■■□ 3.18
COL20A1-202ENST00000415763 TARBP1Q13395 1621 aaKnown RBP34.87■■■■□ 3.17
COL20A1-202ENST00000415763 RAD54L2Q9Y4B4 1467 aa34.84■■■■□ 3.17
COL20A1-202ENST00000415763 AQRO60306 1485 aaKnown RBP eCLIP34.78■■■■□ 3.16
COL20A1-202ENST00000415763 FGD5Q6ZNL6 1462 aa34.78■■■■□ 3.16
COL20A1-202ENST00000415763 SOGA1O94964 1423 aa34.77■■■■□ 3.16
COL20A1-202ENST00000415763 EIF4G3O43432 1585 aaKnown RBP34.75■■■■□ 3.15
COL20A1-202ENST00000415763 OSCARQ8IYS5 282 aa34.7■■■■□ 3.15
COL20A1-202ENST00000415763 TDRD9Q8NDG6 1382 aaKnown RBP34.68■■■■□ 3.14
COL20A1-202ENST00000415763 WRNQ14191 1432 aaPredicted RBP eCLIP34.48■■■■□ 3.11
COL20A1-202ENST00000415763 SYNJ1O43426 1573 aa34.45■■■■□ 3.11
COL20A1-202ENST00000415763 WDR97A6NE52 1622 aa34.44■■■■□ 3.1
COL20A1-202ENST00000415763 TOP2BQ02880 1626 aa34.41■■■■□ 3.1
COL20A1-202ENST00000415763 ABCA10Q8WWZ4 1543 aa34.4■■■■□ 3.1
COL20A1-202ENST00000415763 SNAPC4Q5SXM2 1469 aa34.4■■■■□ 3.1
COL20A1-202ENST00000415763 BIVM-ERCC5R4GMW8 1640 aa34.38■■■■□ 3.09
COL20A1-202ENST00000415763 FBLN2P98095 1184 aa34.37■■■■□ 3.09
COL20A1-202ENST00000415763 GRIN2BQ13224 1484 aa34.36■■■■□ 3.09
COL20A1-202ENST00000415763 CHD1O14646 1710 aa34.34■■■■□ 3.09
COL20A1-202ENST00000415763 GAPVD1Q14C86 1478 aa34.33■■■■□ 3.09
COL20A1-202ENST00000415763 TRIM41Q8WV44 630 aa34.28■■■■□ 3.08
COL20A1-202ENST00000415763 ABCA5Q8WWZ7 1642 aa34.28■■■■□ 3.08
COL20A1-202ENST00000415763 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
COL20A1-202ENST00000415763 CHMP7Q8WUX9 453 aaPredicted RBP34.2■■■■□ 3.07
COL20A1-202ENST00000415763 PBRM1Q86U86 1689 aa34.19■■■■□ 3.06
COL20A1-202ENST00000415763 RIMBP3CA6NJZ7 1639 aa34.17■■■■□ 3.06
COL20A1-202ENST00000415763 RIMBP3BA6NNM3 1639 aa34.17■■■■□ 3.06
COL20A1-202ENST00000415763 SYNJ2O15056 1496 aa34.17■■■■□ 3.06
COL20A1-202ENST00000415763 RIMBP3Q9UFD9 1639 aa34.17■■■■□ 3.06
COL20A1-202ENST00000415763 ARHGEF11O15085 1522 aa34.14■■■■□ 3.06
COL20A1-202ENST00000415763 CLASP1Q7Z460 1538 aa34.05■■■■□ 3.04
COL20A1-202ENST00000415763 ADAMTS12P58397 1594 aa33.97■■■■□ 3.03
COL20A1-202ENST00000415763 ERICH3Q5RHP9 1530 aa33.94■■■■□ 3.02
COL20A1-202ENST00000415763 GRIN2AQ12879 1464 aa33.94■■■■□ 3.02
COL20A1-202ENST00000415763 FHAD1B1AJZ9 1412 aa33.92■■■■□ 3.02
COL20A1-202ENST00000415763 ARAP1Q96P48 1450 aa33.9■■■■□ 3.02
COL20A1-202ENST00000415763 CYB5RLQ6IPT4 315 aa33.9■■■■□ 3.02
COL20A1-202ENST00000415763 NUP160Q12769 1436 aa33.83■■■■□ 3.01
COL20A1-202ENST00000415763 CEP170Q5SW79 1584 aa33.81■■■■□ 3
COL20A1-202ENST00000415763 IGF1RP08069 1367 aa33.79■■■■□ 3
COL20A1-202ENST00000415763 KIF27Q86VH2 1401 aa33.75■■■□□ 2.99
COL20A1-202ENST00000415763 ERCC6L2Q5T890 1561 aa33.65■■■□□ 2.98
COL20A1-202ENST00000415763 SHROOM2Q13796 1616 aa33.55■■■□□ 2.96
COL20A1-202ENST00000415763 RUSC2Q8N2Y8 1516 aa33.54■■■□□ 2.96
COL20A1-202ENST00000415763 CARMIL1Q5VZK9 1371 aa33.52■■■□□ 2.96
COL20A1-202ENST00000415763 JPH4Q96JJ6 628 aa33.51■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms