RNA–Protein interactions for RNA: ENST00000415700.1

LINC01115-201, Transcript of long intergenic non-protein coding RNA 1115, humanhuman

TSL 1 (best)

Gene LINC01115, Length 536 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01115-201ENST00000415700 NISCHQ9Y2I1 1504 aa17.84■□□□□ 0.45
LINC01115-201ENST00000415700 ABCC9O60706 1549 aa16.24■□□□□ 0.19
LINC01115-201ENST00000415700 CCDC180Q9P1Z9 1646 aa16.01■□□□□ 0.15
LINC01115-201ENST00000415700 DNAJC5BQ9UF47 199 aa15.69■□□□□ 0.1
LINC01115-201ENST00000415700 RB1CC1Q8TDY2 1594 aa15.14■□□□□ 0.01
LINC01115-201ENST00000415700 PABPN1Q86U42 306 aaKnown RBP eCLIP15.05■□□□□ -0
LINC01115-201ENST00000415700 NACADO15069 1562 aa15□□□□□ -0.01
LINC01115-201ENST00000415700 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
LINC01115-201ENST00000415700 UNC13AQ9UPW8 1703 aa14.97□□□□□ -0.01
LINC01115-201ENST00000415700 MYO15BQ96JP2 1530 aa14.91□□□□□ -0.02
LINC01115-201ENST00000415700 DCAF8L2P0C7V8 631 aa14.82□□□□□ -0.04
LINC01115-201ENST00000415700 BICRAQ9NZM4 1560 aa14.81□□□□□ -0.04
LINC01115-201ENST00000415700 DCAF1Q9Y4B6 1507 aa14.79□□□□□ -0.04
LINC01115-201ENST00000415700 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
LINC01115-201ENST00000415700 DNAJC5Q9H3Z4 198 aa14.63□□□□□ -0.07
LINC01115-201ENST00000415700 CECR2Q9BXF3 1484 aa14.62□□□□□ -0.07
LINC01115-201ENST00000415700 SHROOM4Q9ULL8 1493 aa14.51□□□□□ -0.09
LINC01115-201ENST00000415700 SCRIBQ14160 1630 aa14.48□□□□□ -0.09
LINC01115-201ENST00000415700 EIF4G1Q04637 1599 aaKnown RBP14.45□□□□□ -0.1
LINC01115-201ENST00000415700 CUX2O14529 1486 aa14.06□□□□□ -0.16
LINC01115-201ENST00000415700 ERCC6Q03468 1493 aa13.99□□□□□ -0.17
LINC01115-201ENST00000415700 TRIM41Q8WV44 630 aa13.91□□□□□ -0.18
LINC01115-201ENST00000415700 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
LINC01115-201ENST00000415700 NESP48681 1621 aa13.86□□□□□ -0.19
LINC01115-201ENST00000415700 BAZ1AQ9NRL2 1556 aaPredicted RBP13.84□□□□□ -0.19
LINC01115-201ENST00000415700 SUPT5HO00267 1087 aaKnown RBP13.83□□□□□ -0.2
LINC01115-201ENST00000415700 SMARCA2P51531 1590 aa13.82□□□□□ -0.2
LINC01115-201ENST00000415700 RSF1Q96T23 1441 aaPredicted RBP13.79□□□□□ -0.2
LINC01115-201ENST00000415700 HMGXB3Q12766 1538 aa13.79□□□□□ -0.2
LINC01115-201ENST00000415700 NCAPD3P42695 1498 aa13.78□□□□□ -0.2
LINC01115-201ENST00000415700 THOC2Q8NI27 1593 aaKnown RBP13.77□□□□□ -0.21
LINC01115-201ENST00000415700 MROH2BQ7Z745 1585 aa13.76□□□□□ -0.21
LINC01115-201ENST00000415700 PEG3Q9GZU2 1588 aa13.76□□□□□ -0.21
LINC01115-201ENST00000415700 ATAD2BQ9ULI0 1458 aa13.75□□□□□ -0.21
LINC01115-201ENST00000415700 BAZ1BQ9UIG0 1483 aaKnown RBP13.67□□□□□ -0.22
LINC01115-201ENST00000415700 KIF21AQ7Z4S6 1674 aa13.67□□□□□ -0.22
LINC01115-201ENST00000415700 WIZO95785 1651 aa13.66□□□□□ -0.22
LINC01115-201ENST00000415700 TOP2AP11388 1531 aaKnown RBP13.54□□□□□ -0.24
LINC01115-201ENST00000415700 LAMC3Q9Y6N6 1575 aa13.54□□□□□ -0.24
LINC01115-201ENST00000415700 PDS5BQ9NTI5 1447 aa13.42□□□□□ -0.26
LINC01115-201ENST00000415700 MRC2Q9UBG0 1479 aa13.41□□□□□ -0.26
LINC01115-201ENST00000415700 WDR62O43379 1518 aa13.4□□□□□ -0.26
LINC01115-201ENST00000415700 CCDC88BA6NC98 1476 aa13.36□□□□□ -0.27
LINC01115-201ENST00000415700 RIMBP3CA6NJZ7 1639 aa13.36□□□□□ -0.27
LINC01115-201ENST00000415700 RIMBP3BA6NNM3 1639 aa13.36□□□□□ -0.27
LINC01115-201ENST00000415700 RIMBP3Q9UFD9 1639 aa13.36□□□□□ -0.27
LINC01115-201ENST00000415700 CADPSQ9ULU8 1353 aa13.33□□□□□ -0.27
LINC01115-201ENST00000415700 PRDM2Q13029 1718 aa13.33□□□□□ -0.27
LINC01115-201ENST00000415700 OSCARQ8IYS5 282 aa13.33□□□□□ -0.28
LINC01115-201ENST00000415700 CFTRP13569 1480 aa13.28□□□□□ -0.28
LINC01115-201ENST00000415700 CEP164Q9UPV0 1460 aa13.26□□□□□ -0.29
LINC01115-201ENST00000415700 CHIC1Q5VXU3 224 aa13.23□□□□□ -0.29
LINC01115-201ENST00000415700 ARHGEF11O15085 1522 aa13.22□□□□□ -0.29
LINC01115-201ENST00000415700 FANCD2Q9BXW9 1451 aa13.22□□□□□ -0.29
LINC01115-201ENST00000415700 URB2Q14146 1524 aaKnown RBP13.18□□□□□ -0.3
LINC01115-201ENST00000415700 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
LINC01115-201ENST00000415700 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
LINC01115-201ENST00000415700 ZNF608Q9ULD9 1512 aaPredicted RBP13.13□□□□□ -0.31
LINC01115-201ENST00000415700 AEBP2Q6ZN18 517 aaPredicted RBP13.08□□□□□ -0.32
LINC01115-201ENST00000415700 ARAP1Q96P48 1450 aa13.08□□□□□ -0.32
LINC01115-201ENST00000415700 CHD1O14646 1710 aa13.07□□□□□ -0.32
LINC01115-201ENST00000415700 ABCC8Q09428 1581 aa13.05□□□□□ -0.32
LINC01115-201ENST00000415700 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
LINC01115-201ENST00000415700 DNMBPQ6XZF7 1577 aa13.03□□□□□ -0.32
LINC01115-201ENST00000415700 TOPBP1Q92547 1522 aa13□□□□□ -0.33
LINC01115-201ENST00000415700 WRNQ14191 1432 aaPredicted RBP eCLIP12.98□□□□□ -0.33
LINC01115-201ENST00000415700 IFT140Q96RY7 1462 aa12.97□□□□□ -0.33
LINC01115-201ENST00000415700 SYNJ1O43426 1573 aa12.94□□□□□ -0.34
LINC01115-201ENST00000415700 BIVM-ERCC5R4GMW8 1640 aa12.92□□□□□ -0.34
LINC01115-201ENST00000415700 FBLN2P98095 1184 aa12.92□□□□□ -0.34
LINC01115-201ENST00000415700 TOP2BQ02880 1626 aa12.91□□□□□ -0.34
LINC01115-201ENST00000415700 AQRO60306 1485 aaKnown RBP eCLIP12.91□□□□□ -0.34
LINC01115-201ENST00000415700 WDR97A6NE52 1622 aa12.9□□□□□ -0.34
LINC01115-201ENST00000415700 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
LINC01115-201ENST00000415700 CUX1P39880 1505 aa12.88□□□□□ -0.35
LINC01115-201ENST00000415700 POLA1P09884 1462 aaPredicted RBP12.88□□□□□ -0.35
LINC01115-201ENST00000415700 FGD5Q6ZNL6 1462 aa12.83□□□□□ -0.36
LINC01115-201ENST00000415700 CLASP1Q7Z460 1538 aa12.82□□□□□ -0.36
LINC01115-201ENST00000415700 EEA1Q15075 1411 aa12.79□□□□□ -0.36
LINC01115-201ENST00000415700 SOGA1O94964 1423 aa12.78□□□□□ -0.36
LINC01115-201ENST00000415700 RAD54L2Q9Y4B4 1467 aa12.78□□□□□ -0.36
LINC01115-201ENST00000415700 SNAPC4Q5SXM2 1469 aa12.77□□□□□ -0.37
LINC01115-201ENST00000415700 FAM9AQ8IZU1 332 aaPredicted RBP12.76□□□□□ -0.37
LINC01115-201ENST00000415700 TDRD9Q8NDG6 1382 aaKnown RBP12.76□□□□□ -0.37
LINC01115-201ENST00000415700 PBRM1Q86U86 1689 aa12.75□□□□□ -0.37
LINC01115-201ENST00000415700 ABCA5Q8WWZ7 1642 aa12.73□□□□□ -0.37
LINC01115-201ENST00000415700 RUSC2Q8N2Y8 1516 aa12.72□□□□□ -0.37
LINC01115-201ENST00000415700 MAGI1Q96QZ7 1491 aaPredicted RBP12.72□□□□□ -0.37
LINC01115-201ENST00000415700 ABCA10Q8WWZ4 1543 aa12.72□□□□□ -0.37
LINC01115-201ENST00000415700 GRIN2BQ13224 1484 aa12.7□□□□□ -0.38
LINC01115-201ENST00000415700 GAPVD1Q14C86 1478 aa12.7□□□□□ -0.38
LINC01115-201ENST00000415700 ERCC6L2Q5T890 1561 aa12.69□□□□□ -0.38
LINC01115-201ENST00000415700 LOC105371045A0A1W2PR82 267 aa12.69□□□□□ -0.38
LINC01115-201ENST00000415700 CSRNP3Q8WYN3 585 aa12.68□□□□□ -0.38
LINC01115-201ENST00000415700 KIF27Q86VH2 1401 aa12.68□□□□□ -0.38
LINC01115-201ENST00000415700 CHMP7Q8WUX9 453 aaPredicted RBP12.67□□□□□ -0.38
LINC01115-201ENST00000415700 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
LINC01115-201ENST00000415700 SYNJ2O15056 1496 aa12.65□□□□□ -0.38
LINC01115-201ENST00000415700 KIF13AQ9H1H9 1805 aa12.65□□□□□ -0.39
LINC01115-201ENST00000415700 KIF21BO75037 1637 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms