RNA–Protein interactions for RNA: ENST00000415670.1

CDC42EP1-202, Transcript of CDC42 effector protein 1, humanhuman

APPRIS ALT2 TSL 3

Gene CDC42EP1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-202ENST00000415670 NISCHQ9Y2I1 1504 aa41.53■■■■■ 4.24
CDC42EP1-202ENST00000415670 ABCC9O60706 1549 aa38.16■■■■□ 3.7
CDC42EP1-202ENST00000415670 CCDC180Q9P1Z9 1646 aa37.32■■■■□ 3.56
CDC42EP1-202ENST00000415670 DNAJC5BQ9UF47 199 aa36.49■■■■□ 3.43
CDC42EP1-202ENST00000415670 RB1CC1Q8TDY2 1594 aa35.84■■■■□ 3.33
CDC42EP1-202ENST00000415670 PABPN1Q86U42 306 aaKnown RBP eCLIP35.57■■■■□ 3.28
CDC42EP1-202ENST00000415670 DCAF8L2P0C7V8 631 aa35.53■■■■□ 3.28
CDC42EP1-202ENST00000415670 NACADO15069 1562 aa35.44■■■■□ 3.26
CDC42EP1-202ENST00000415670 UNC13AQ9UPW8 1703 aa35.22■■■■□ 3.23
CDC42EP1-202ENST00000415670 BICRAQ9NZM4 1560 aa35■■■■□ 3.19
CDC42EP1-202ENST00000415670 MYO15BQ96JP2 1530 aa34.67■■■■□ 3.14
CDC42EP1-202ENST00000415670 CC2D2AQ9P2K1 1620 aa34.36■■■■□ 3.09
CDC42EP1-202ENST00000415670 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
CDC42EP1-202ENST00000415670 ZCCHC6Q5VYS8 1495 aaKnown RBP34.26■■■■□ 3.07
CDC42EP1-202ENST00000415670 SCRIBQ14160 1630 aa34.22■■■■□ 3.07
CDC42EP1-202ENST00000415670 EIF4G1Q04637 1599 aaKnown RBP34.1■■■■□ 3.05
CDC42EP1-202ENST00000415670 DCAF1Q9Y4B6 1507 aa34.09■■■■□ 3.05
CDC42EP1-202ENST00000415670 SHROOM4Q9ULL8 1493 aa34.07■■■■□ 3.05
CDC42EP1-202ENST00000415670 DNAJC5Q9H3Z4 198 aa33.66■■■□□ 2.98
CDC42EP1-202ENST00000415670 CUX2O14529 1486 aa32.85■■■□□ 2.85
CDC42EP1-202ENST00000415670 ERCC6Q03468 1493 aa32.83■■■□□ 2.85
CDC42EP1-202ENST00000415670 NCAPD3P42695 1498 aa32.8■■■□□ 2.84
CDC42EP1-202ENST00000415670 ATAD2BQ9ULI0 1458 aa32.69■■■□□ 2.82
CDC42EP1-202ENST00000415670 NESP48681 1621 aa32.69■■■□□ 2.82
CDC42EP1-202ENST00000415670 SMARCA4P51532 1647 aa32.49■■■□□ 2.79
CDC42EP1-202ENST00000415670 HMGXB3Q12766 1538 aa32.42■■■□□ 2.78
CDC42EP1-202ENST00000415670 SMARCA2P51531 1590 aa32.42■■■□□ 2.78
CDC42EP1-202ENST00000415670 BAZ1BQ9UIG0 1483 aaKnown RBP32.29■■■□□ 2.76
CDC42EP1-202ENST00000415670 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
CDC42EP1-202ENST00000415670 BAZ1AQ9NRL2 1556 aaPredicted RBP32.16■■■□□ 2.74
CDC42EP1-202ENST00000415670 KIF21AQ7Z4S6 1674 aa32.13■■■□□ 2.73
CDC42EP1-202ENST00000415670 MROH2BQ7Z745 1585 aa32.11■■■□□ 2.73
CDC42EP1-202ENST00000415670 PEG3Q9GZU2 1588 aa32.08■■■□□ 2.73
CDC42EP1-202ENST00000415670 TRIM41Q8WV44 630 aa32.08■■■□□ 2.73
CDC42EP1-202ENST00000415670 LAMC3Q9Y6N6 1575 aa32.07■■■□□ 2.72
CDC42EP1-202ENST00000415670 PDS5BQ9NTI5 1447 aa31.93■■■□□ 2.7
CDC42EP1-202ENST00000415670 CADPSQ9ULU8 1353 aa31.81■■■□□ 2.68
CDC42EP1-202ENST00000415670 MRC2Q9UBG0 1479 aa31.74■■■□□ 2.67
CDC42EP1-202ENST00000415670 WIZO95785 1651 aa31.71■■■□□ 2.67
CDC42EP1-202ENST00000415670 WDR62O43379 1518 aa31.66■■■□□ 2.66
CDC42EP1-202ENST00000415670 CEP164Q9UPV0 1460 aa31.49■■■□□ 2.63
CDC42EP1-202ENST00000415670 FANCD2Q9BXW9 1451 aa31.48■■■□□ 2.63
CDC42EP1-202ENST00000415670 OSCARQ8IYS5 282 aa31.41■■■□□ 2.62
CDC42EP1-202ENST00000415670 URB2Q14146 1524 aaKnown RBP31.33■■■□□ 2.61
CDC42EP1-202ENST00000415670 CFTRP13569 1480 aa31.33■■■□□ 2.61
CDC42EP1-202ENST00000415670 RSF1Q96T23 1441 aaPredicted RBP31.22■■■□□ 2.59
CDC42EP1-202ENST00000415670 TOP2AP11388 1531 aaKnown RBP31.1■■■□□ 2.57
CDC42EP1-202ENST00000415670 RIMBP3CA6NJZ7 1639 aa31.09■■■□□ 2.57
CDC42EP1-202ENST00000415670 RIMBP3BA6NNM3 1639 aa31.09■■■□□ 2.57
CDC42EP1-202ENST00000415670 RIMBP3Q9UFD9 1639 aa31.09■■■□□ 2.57
CDC42EP1-202ENST00000415670 ZNF608Q9ULD9 1512 aaPredicted RBP31.08■■■□□ 2.57
CDC42EP1-202ENST00000415670 ARHGEF11O15085 1522 aa30.9■■■□□ 2.54
CDC42EP1-202ENST00000415670 CCDC88BA6NC98 1476 aa30.89■■■□□ 2.54
CDC42EP1-202ENST00000415670 PRDM2Q13029 1718 aa30.87■■■□□ 2.53
CDC42EP1-202ENST00000415670 IFT140Q96RY7 1462 aa30.87■■■□□ 2.53
CDC42EP1-202ENST00000415670 CYB5RLQ6IPT4 315 aa30.84■■■□□ 2.53
CDC42EP1-202ENST00000415670 TOPBP1Q92547 1522 aa30.83■■■□□ 2.53
CDC42EP1-202ENST00000415670 EIF4G3O43432 1585 aaKnown RBP30.74■■■□□ 2.51
CDC42EP1-202ENST00000415670 AQRO60306 1485 aaKnown RBP eCLIP30.73■■■□□ 2.519e-7■□□□□ 8.7
CDC42EP1-202ENST00000415670 CHD1O14646 1710 aa30.67■■■□□ 2.5
CDC42EP1-202ENST00000415670 TRHP20396 242 aaPredicted RBP30.64■■■□□ 2.5
CDC42EP1-202ENST00000415670 FBLN2P98095 1184 aa30.64■■■□□ 2.5
CDC42EP1-202ENST00000415670 ARAP1Q96P48 1450 aa30.61■■■□□ 2.49
CDC42EP1-202ENST00000415670 TARBP1Q13395 1621 aaKnown RBP30.6■■■□□ 2.49
CDC42EP1-202ENST00000415670 DNMBPQ6XZF7 1577 aa30.59■■■□□ 2.49
CDC42EP1-202ENST00000415670 ABCC8Q09428 1581 aa30.53■■■□□ 2.48
CDC42EP1-202ENST00000415670 RAD54L2Q9Y4B4 1467 aa30.51■■■□□ 2.48
CDC42EP1-202ENST00000415670 POLA1P09884 1462 aaPredicted RBP30.48■■■□□ 2.47
CDC42EP1-202ENST00000415670 TDRD9Q8NDG6 1382 aaKnown RBP30.47■■■□□ 2.47
CDC42EP1-202ENST00000415670 SOGA1O94964 1423 aa30.36■■■□□ 2.45
CDC42EP1-202ENST00000415670 SNAPC4Q5SXM2 1469 aa30.31■■■□□ 2.44
CDC42EP1-202ENST00000415670 CLASP1Q7Z460 1538 aa30.25■■■□□ 2.43
CDC42EP1-202ENST00000415670 CHMP7Q8WUX9 453 aaPredicted RBP30.23■■■□□ 2.43
CDC42EP1-202ENST00000415670 FGD5Q6ZNL6 1462 aa30.23■■■□□ 2.43
CDC42EP1-202ENST00000415670 CUX1P39880 1505 aa30.17■■■□□ 2.42
CDC42EP1-202ENST00000415670 SYNJ1O43426 1573 aa30.08■■■□□ 2.41
CDC42EP1-202ENST00000415670 GRIN2BQ13224 1484 aa30.06■■■□□ 2.4
CDC42EP1-202ENST00000415670 MAGI1Q96QZ7 1491 aaPredicted RBP30.06■■■□□ 2.4
CDC42EP1-202ENST00000415670 AEBP2Q6ZN18 517 aaPredicted RBP30.04■■■□□ 2.4
CDC42EP1-202ENST00000415670 SYNJ2O15056 1496 aa30.03■■■□□ 2.4
CDC42EP1-202ENST00000415670 GAPVD1Q14C86 1478 aa29.98■■■□□ 2.39
CDC42EP1-202ENST00000415670 WDR97A6NE52 1622 aa29.97■■■□□ 2.39
CDC42EP1-202ENST00000415670 PBRM1Q86U86 1689 aa29.95■■■□□ 2.38
CDC42EP1-202ENST00000415670 ERCC6L2Q5T890 1561 aa29.94■■■□□ 2.38
CDC42EP1-202ENST00000415670 ABCA5Q8WWZ7 1642 aa29.8■■■□□ 2.36
CDC42EP1-202ENST00000415670 ABCA10Q8WWZ4 1543 aa29.78■■■□□ 2.36
CDC42EP1-202ENST00000415670 CEP170Q5SW79 1584 aa29.7■■■□□ 2.35
CDC42EP1-202ENST00000415670 GRIN2AQ12879 1464 aa29.7■■■□□ 2.35
CDC42EP1-202ENST00000415670 NUP160Q12769 1436 aa29.62■■■□□ 2.33
CDC42EP1-202ENST00000415670 ADAMTS12P58397 1594 aa29.61■■■□□ 2.33
CDC42EP1-202ENST00000415670 SUPT5HO00267 1087 aaKnown RBP29.6■■■□□ 2.33
CDC42EP1-202ENST00000415670 WRNQ14191 1432 aaPredicted RBP eCLIP29.54■■■□□ 2.32
CDC42EP1-202ENST00000415670 SHROOM2Q13796 1616 aa29.53■■■□□ 2.32
CDC42EP1-202ENST00000415670 KIF13AQ9H1H9 1805 aa29.52■■■□□ 2.32
CDC42EP1-202ENST00000415670 FHAD1B1AJZ9 1412 aa29.49■■■□□ 2.31
CDC42EP1-202ENST00000415670 PRG4Q92954 1404 aaPredicted RBP29.45■■■□□ 2.31
CDC42EP1-202ENST00000415670 TOP2BQ02880 1626 aa29.42■■■□□ 2.3
CDC42EP1-202ENST00000415670 JPH4Q96JJ6 628 aa29.42■■■□□ 2.3
CDC42EP1-202ENST00000415670 BIVM-ERCC5R4GMW8 1640 aa29.42■■■□□ 2.3
CDC42EP1-202ENST00000415670 FAM69CQ0P6D2 419 aa29.36■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms