RNA–Protein interactions for RNA: ENST00000415653.5

IFT27-202, Transcript of intraflagellar transport 27, humanhuman

TSL 5

Gene IFT27, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT27-202ENST00000415653 NISCHQ9Y2I1 1504 aa29.18■■■□□ 2.26
IFT27-202ENST00000415653 CCDC180Q9P1Z9 1646 aa26.28■■□□□ 1.8
IFT27-202ENST00000415653 ABCC9O60706 1549 aa26.13■■□□□ 1.77
IFT27-202ENST00000415653 RB1CC1Q8TDY2 1594 aa24.94■■□□□ 1.58
IFT27-202ENST00000415653 NACADO15069 1562 aa24.77■■□□□ 1.56
IFT27-202ENST00000415653 MYO15BQ96JP2 1530 aa24.47■■□□□ 1.51
IFT27-202ENST00000415653 DCAF8L2P0C7V8 631 aa24.41■■□□□ 1.5
IFT27-202ENST00000415653 UNC13AQ9UPW8 1703 aa24.36■■□□□ 1.49
IFT27-202ENST00000415653 DNAJC5BQ9UF47 199 aa24.36■■□□□ 1.49
IFT27-202ENST00000415653 ZCCHC6Q5VYS8 1495 aaKnown RBP24.25■■□□□ 1.47
IFT27-202ENST00000415653 PABPN1Q86U42 306 aaKnown RBP eCLIP24.22■■□□□ 1.47
IFT27-202ENST00000415653 BICRAQ9NZM4 1560 aa24.2■■□□□ 1.46
IFT27-202ENST00000415653 DCAF1Q9Y4B6 1507 aa24.15■■□□□ 1.46
IFT27-202ENST00000415653 SHROOM4Q9ULL8 1493 aa23.98■■□□□ 1.43
IFT27-202ENST00000415653 SCRIBQ14160 1630 aa23.88■■□□□ 1.41
IFT27-202ENST00000415653 CC2D2AQ9P2K1 1620 aa23.63■■□□□ 1.37
IFT27-202ENST00000415653 EIF4G1Q04637 1599 aaKnown RBP23.61■■□□□ 1.37
IFT27-202ENST00000415653 CECR2Q9BXF3 1484 aa23.55■■□□□ 1.36
IFT27-202ENST00000415653 NCAPD3P42695 1498 aa22.82■■□□□ 1.24
IFT27-202ENST00000415653 SMARCA4P51532 1647 aa22.79■■□□□ 1.24
IFT27-202ENST00000415653 ATAD2BQ9ULI0 1458 aa22.76■■□□□ 1.23
IFT27-202ENST00000415653 SMARCA2P51531 1590 aa22.75■■□□□ 1.23
IFT27-202ENST00000415653 HMGXB3Q12766 1538 aa22.74■■□□□ 1.23
IFT27-202ENST00000415653 BAZ1AQ9NRL2 1556 aaPredicted RBP22.69■■□□□ 1.22
IFT27-202ENST00000415653 PEG3Q9GZU2 1588 aa22.59■■□□□ 1.21
IFT27-202ENST00000415653 ERCC6Q03468 1493 aa22.59■■□□□ 1.21
IFT27-202ENST00000415653 CUX2O14529 1486 aa22.57■■□□□ 1.2
IFT27-202ENST00000415653 BAZ1BQ9UIG0 1483 aaKnown RBP22.57■■□□□ 1.2
IFT27-202ENST00000415653 MROH2BQ7Z745 1585 aa22.47■■□□□ 1.19
IFT27-202ENST00000415653 NESP48681 1621 aa22.44■■□□□ 1.18
IFT27-202ENST00000415653 DNAJC5Q9H3Z4 198 aa22.38■■□□□ 1.17
IFT27-202ENST00000415653 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
IFT27-202ENST00000415653 THOC2Q8NI27 1593 aaKnown RBP22.32■■□□□ 1.16
IFT27-202ENST00000415653 KIF21AQ7Z4S6 1674 aa22.21■■□□□ 1.15
IFT27-202ENST00000415653 WIZO95785 1651 aa22.2■■□□□ 1.15
IFT27-202ENST00000415653 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
IFT27-202ENST00000415653 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
IFT27-202ENST00000415653 MRC2Q9UBG0 1479 aa22.03■■□□□ 1.12
IFT27-202ENST00000415653 WDR62O43379 1518 aa22.01■■□□□ 1.11
IFT27-202ENST00000415653 TOP2AP11388 1531 aaKnown RBP21.99■■□□□ 1.11
IFT27-202ENST00000415653 RSF1Q96T23 1441 aaPredicted RBP21.98■■□□□ 1.11
IFT27-202ENST00000415653 CEP164Q9UPV0 1460 aa21.95■■□□□ 1.1
IFT27-202ENST00000415653 CFTRP13569 1480 aa21.9■■□□□ 1.1
IFT27-202ENST00000415653 FANCD2Q9BXW9 1451 aa21.9■■□□□ 1.1
IFT27-202ENST00000415653 PRDM2Q13029 1718 aa21.76■■□□□ 1.07
IFT27-202ENST00000415653 URB2Q14146 1524 aaKnown RBP21.72■■□□□ 1.07
IFT27-202ENST00000415653 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.06
IFT27-202ENST00000415653 IFT140Q96RY7 1462 aa21.5■■□□□ 1.03
IFT27-202ENST00000415653 TOPBP1Q92547 1522 aa21.5■■□□□ 1.03
IFT27-202ENST00000415653 DNMBPQ6XZF7 1577 aa21.45■■□□□ 1.02
IFT27-202ENST00000415653 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
IFT27-202ENST00000415653 ZNF608Q9ULD9 1512 aaPredicted RBP21.42■■□□□ 1.02
IFT27-202ENST00000415653 TRIM41Q8WV44 630 aa21.4■■□□□ 1.02
IFT27-202ENST00000415653 EIF4G3O43432 1585 aaKnown RBP21.4■■□□□ 1.02
IFT27-202ENST00000415653 OSCARQ8IYS5 282 aa21.38■■□□□ 1.01
IFT27-202ENST00000415653 TARBP1Q13395 1621 aaKnown RBP21.31■■□□□ 1
IFT27-202ENST00000415653 AEBP2Q6ZN18 517 aaPredicted RBP21.3■■□□□ 1
IFT27-202ENST00000415653 POLA1P09884 1462 aaPredicted RBP21.27■■□□□ 1
IFT27-202ENST00000415653 RIMBP3CA6NJZ7 1639 aa21.25■□□□□ 0.99
IFT27-202ENST00000415653 RIMBP3BA6NNM3 1639 aa21.25■□□□□ 0.99
IFT27-202ENST00000415653 RIMBP3Q9UFD9 1639 aa21.25■□□□□ 0.99
IFT27-202ENST00000415653 CHD1O14646 1710 aa21.2■□□□□ 0.98
IFT27-202ENST00000415653 AQRO60306 1485 aaKnown RBP eCLIP21.19■□□□□ 0.98
IFT27-202ENST00000415653 ARHGEF11O15085 1522 aa21.19■□□□□ 0.98
IFT27-202ENST00000415653 WDR97A6NE52 1622 aa21.17■□□□□ 0.98
IFT27-202ENST00000415653 FGD5Q6ZNL6 1462 aa21.15■□□□□ 0.98
IFT27-202ENST00000415653 RAD54L2Q9Y4B4 1467 aa21.14■□□□□ 0.98
IFT27-202ENST00000415653 CUX1P39880 1505 aa21.13■□□□□ 0.97
IFT27-202ENST00000415653 SOGA1O94964 1423 aa21.12■□□□□ 0.97
IFT27-202ENST00000415653 SNAPC4Q5SXM2 1469 aa21.06■□□□□ 0.96
IFT27-202ENST00000415653 TDRD9Q8NDG6 1382 aaKnown RBP21.05■□□□□ 0.96
IFT27-202ENST00000415653 MAGI1Q96QZ7 1491 aaPredicted RBP21.02■□□□□ 0.96
IFT27-202ENST00000415653 GRIN2BQ13224 1484 aa20.99■□□□□ 0.95
IFT27-202ENST00000415653 FBLN2P98095 1184 aa20.98■□□□□ 0.95
IFT27-202ENST00000415653 ARAP1Q96P48 1450 aa20.98■□□□□ 0.95
IFT27-202ENST00000415653 CLASP1Q7Z460 1538 aa20.98■□□□□ 0.95
IFT27-202ENST00000415653 SYNJ1O43426 1573 aa20.96■□□□□ 0.95
IFT27-202ENST00000415653 PBRM1Q86U86 1689 aa20.96■□□□□ 0.95
IFT27-202ENST00000415653 ABCA5Q8WWZ7 1642 aa20.93■□□□□ 0.94
IFT27-202ENST00000415653 SYNJ2O15056 1496 aa20.93■□□□□ 0.94
IFT27-202ENST00000415653 ABCA10Q8WWZ4 1543 aa20.92■□□□□ 0.94
IFT27-202ENST00000415653 SUPT5HO00267 1087 aaKnown RBP20.91■□□□□ 0.94
IFT27-202ENST00000415653 GAPVD1Q14C86 1478 aa20.89■□□□□ 0.94
IFT27-202ENST00000415653 CYB5RLQ6IPT4 315 aa20.87■□□□□ 0.93
IFT27-202ENST00000415653 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
IFT27-202ENST00000415653 BIVM-ERCC5R4GMW8 1640 aa20.84■□□□□ 0.93
IFT27-202ENST00000415653 TOP2BQ02880 1626 aa20.82■□□□□ 0.92
IFT27-202ENST00000415653 WRNQ14191 1432 aaPredicted RBP eCLIP20.8■□□□□ 0.92
IFT27-202ENST00000415653 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
IFT27-202ENST00000415653 GRIN2AQ12879 1464 aa20.74■□□□□ 0.91
IFT27-202ENST00000415653 CEP170Q5SW79 1584 aa20.68■□□□□ 0.9
IFT27-202ENST00000415653 ERICH3Q5RHP9 1530 aa20.67■□□□□ 0.9
IFT27-202ENST00000415653 NUP160Q12769 1436 aa20.66■□□□□ 0.9
IFT27-202ENST00000415653 FHAD1B1AJZ9 1412 aa20.65■□□□□ 0.9
IFT27-202ENST00000415653 TRHP20396 242 aaPredicted RBP20.64■□□□□ 0.89
IFT27-202ENST00000415653 SHROOM2Q13796 1616 aa20.6■□□□□ 0.89
IFT27-202ENST00000415653 ERCC6L2Q5T890 1561 aa20.59■□□□□ 0.89
IFT27-202ENST00000415653 RUSC2Q8N2Y8 1516 aa20.51■□□□□ 0.87
IFT27-202ENST00000415653 PRG4Q92954 1404 aaPredicted RBP20.41■□□□□ 0.86
IFT27-202ENST00000415653 CUL7Q14999 1698 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms