RNA–Protein interactions for RNA: ENST00000415452.5

RUBCN-204, Transcript of RUN and cysteine rich domain containing beclin 1 interacting protein, humanhuman

TSL 1 (best)

Gene RUBCN, Length 2,665 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUBCN-204ENST00000415452 NISCHQ9Y2I1 1504 aa24.83■■□□□ 1.56
RUBCN-204ENST00000415452 CCDC180Q9P1Z9 1646 aa21.45■■□□□ 1.02
RUBCN-204ENST00000415452 ZCCHC6Q5VYS8 1495 aaKnown RBP20.92■□□□□ 0.94
RUBCN-204ENST00000415452 SHROOM4Q9ULL8 1493 aa20.57■□□□□ 0.88
RUBCN-204ENST00000415452 DCAF1Q9Y4B6 1507 aa20.51■□□□□ 0.87
RUBCN-204ENST00000415452 DCAF8L2P0C7V8 631 aa20.45■□□□□ 0.86
RUBCN-204ENST00000415452 ABCC9O60706 1549 aa20.15■□□□□ 0.82
RUBCN-204ENST00000415452 MYO15BQ96JP2 1530 aa20.12■□□□□ 0.81
RUBCN-204ENST00000415452 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
RUBCN-204ENST00000415452 NACADO15069 1562 aa19.9■□□□□ 0.78
RUBCN-204ENST00000415452 SCRIBQ14160 1630 aa19.82■□□□□ 0.76
RUBCN-204ENST00000415452 RB1CC1Q8TDY2 1594 aa19.65■□□□□ 0.74
RUBCN-204ENST00000415452 RSF1Q96T23 1441 aaPredicted RBP19.42■□□□□ 0.7
RUBCN-204ENST00000415452 CHIC1Q5VXU3 224 aa19.32■□□□□ 0.68
RUBCN-204ENST00000415452 UNC13AQ9UPW8 1703 aa19.29■□□□□ 0.68
RUBCN-204ENST00000415452 CECR2Q9BXF3 1484 aa19.28■□□□□ 0.68
RUBCN-204ENST00000415452 MROH2BQ7Z745 1585 aa19.21■□□□□ 0.67
RUBCN-204ENST00000415452 BAZ1AQ9NRL2 1556 aaPredicted RBP19.14■□□□□ 0.65
RUBCN-204ENST00000415452 WIZO95785 1651 aa19.08■□□□□ 0.65
RUBCN-204ENST00000415452 BICRAQ9NZM4 1560 aa19.06■□□□□ 0.64
RUBCN-204ENST00000415452 SMARCA4P51532 1647 aa19.01■□□□□ 0.63
RUBCN-204ENST00000415452 PABPN1Q86U42 306 aaKnown RBP eCLIP18.99■□□□□ 0.63
RUBCN-204ENST00000415452 TOP2AP11388 1531 aaKnown RBP18.86■□□□□ 0.61
RUBCN-204ENST00000415452 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
RUBCN-204ENST00000415452 PEG3Q9GZU2 1588 aa18.74■□□□□ 0.59
RUBCN-204ENST00000415452 SMARCA2P51531 1590 aa18.71■□□□□ 0.59
RUBCN-204ENST00000415452 CCDC88BA6NC98 1476 aa18.7■□□□□ 0.58
RUBCN-204ENST00000415452 EIF4G1Q04637 1599 aaKnown RBP18.7■□□□□ 0.58
RUBCN-204ENST00000415452 LOC105371045A0A1W2PR82 267 aa18.61■□□□□ 0.57
RUBCN-204ENST00000415452 ATAD2BQ9ULI0 1458 aa18.6■□□□□ 0.57
RUBCN-204ENST00000415452 BAZ1BQ9UIG0 1483 aaKnown RBP18.52■□□□□ 0.56
RUBCN-204ENST00000415452 FAM9AQ8IZU1 332 aaPredicted RBP18.44■□□□□ 0.54
RUBCN-204ENST00000415452 ABCC8Q09428 1581 aa18.44■□□□□ 0.54
RUBCN-204ENST00000415452 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
RUBCN-204ENST00000415452 NCAPD3P42695 1498 aa18.37■□□□□ 0.53
RUBCN-204ENST00000415452 HMGXB3Q12766 1538 aa18.37■□□□□ 0.53
RUBCN-204ENST00000415452 WRNQ14191 1432 aaPredicted RBP eCLIP18.27■□□□□ 0.51
RUBCN-204ENST00000415452 EEA1Q15075 1411 aa18.19■□□□□ 0.5
RUBCN-204ENST00000415452 PELP1Q8IZL8 1130 aaKnown RBP18.18■□□□□ 0.5
RUBCN-204ENST00000415452 EHMT2Q96KQ7 1210 aa18.18■□□□□ 0.5
RUBCN-204ENST00000415452 SYNJ1O43426 1573 aa18.17■□□□□ 0.5
RUBCN-204ENST00000415452 SOGA1O94964 1423 aa18.17■□□□□ 0.5
RUBCN-204ENST00000415452 PCGF6Q9BYE7 350 aa18.17■□□□□ 0.5
RUBCN-204ENST00000415452 CC2D2AQ9P2K1 1620 aa18.12■□□□□ 0.49
RUBCN-204ENST00000415452 CSRNP3Q8WYN3 585 aa18.09■□□□□ 0.49
RUBCN-204ENST00000415452 RUSC2Q8N2Y8 1516 aa18.09■□□□□ 0.49
RUBCN-204ENST00000415452 CFTRP13569 1480 aa18.07■□□□□ 0.48
RUBCN-204ENST00000415452 TOP2BQ02880 1626 aa18.07■□□□□ 0.48
RUBCN-204ENST00000415452 TRIM26Q12899 539 aaPredicted RBP18.06■□□□□ 0.48
RUBCN-204ENST00000415452 BIVM-ERCC5R4GMW8 1640 aa18.04■□□□□ 0.48
RUBCN-204ENST00000415452 PRDM2Q13029 1718 aa18.01■□□□□ 0.47
RUBCN-204ENST00000415452 TNIKQ9UKE5 1360 aa17.99■□□□□ 0.47
RUBCN-204ENST00000415452 GOLGA3Q08378 1498 aa17.97■□□□□ 0.47
RUBCN-204ENST00000415452 KIF21BO75037 1637 aa17.94■□□□□ 0.46
RUBCN-204ENST00000415452 CADPSQ9ULU8 1353 aa17.94■□□□□ 0.46
RUBCN-204ENST00000415452 HRCP23327 699 aa17.94■□□□□ 0.46
RUBCN-204ENST00000415452 CEP164Q9UPV0 1460 aa17.93■□□□□ 0.46
RUBCN-204ENST00000415452 CUX1P39880 1505 aa17.93■□□□□ 0.46
RUBCN-204ENST00000415452 CEP162Q5TB80 1403 aa17.92■□□□□ 0.46
RUBCN-204ENST00000415452 UBTFP17480 764 aaKnown RBP17.91■□□□□ 0.46
RUBCN-204ENST00000415452 MYT1Q01538 1121 aa17.78■□□□□ 0.44
RUBCN-204ENST00000415452 RAPGEF2Q9Y4G8 1499 aa17.78■□□□□ 0.44
RUBCN-204ENST00000415452 KIF27Q86VH2 1401 aa17.77■□□□□ 0.44
RUBCN-204ENST00000415452 ERICH3Q5RHP9 1530 aa17.75■□□□□ 0.43
RUBCN-204ENST00000415452 FANCD2Q9BXW9 1451 aa17.75■□□□□ 0.43
RUBCN-204ENST00000415452 PRXQ9BXM0 1461 aa17.74■□□□□ 0.43
RUBCN-204ENST00000415452 PPARGC1BQ86YN6 1023 aaKnown RBP17.72■□□□□ 0.43
RUBCN-204ENST00000415452 CLIP1P30622 1438 aa17.7■□□□□ 0.42
RUBCN-204ENST00000415452 LAMC3Q9Y6N6 1575 aa17.68■□□□□ 0.42
RUBCN-204ENST00000415452 FGD5Q6ZNL6 1462 aa17.68■□□□□ 0.42
RUBCN-204ENST00000415452 NESP48681 1621 aa17.67■□□□□ 0.42
RUBCN-204ENST00000415452 DNMBPQ6XZF7 1577 aa17.64■□□□□ 0.42
RUBCN-204ENST00000415452 CUX2O14529 1486 aa17.64■□□□□ 0.41
RUBCN-204ENST00000415452 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
RUBCN-204ENST00000415452 TOPBP1Q92547 1522 aa17.59■□□□□ 0.41
RUBCN-204ENST00000415452 IGF1RP08069 1367 aa17.58■□□□□ 0.4
RUBCN-204ENST00000415452 PDS5BQ9NTI5 1447 aa17.54■□□□□ 0.4
RUBCN-204ENST00000415452 ZEB1P37275 1124 aaPredicted RBP17.54■□□□□ 0.4
RUBCN-204ENST00000415452 POLA1P09884 1462 aaPredicted RBP17.54■□□□□ 0.4
RUBCN-204ENST00000415452 ABCA10Q8WWZ4 1543 aa17.52■□□□□ 0.4
RUBCN-204ENST00000415452 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.4
RUBCN-204ENST00000415452 TTBK1Q5TCY1 1321 aaPredicted RBP17.5■□□□□ 0.39
RUBCN-204ENST00000415452 URB2Q14146 1524 aaKnown RBP17.5■□□□□ 0.39
RUBCN-204ENST00000415452 RAD54L2Q9Y4B4 1467 aa17.5■□□□□ 0.39
RUBCN-204ENST00000415452 CARMIL1Q5VZK9 1371 aa17.5■□□□□ 0.39
RUBCN-204ENST00000415452 ARAP1Q96P48 1450 aa17.47■□□□□ 0.39
RUBCN-204ENST00000415452 APLP2Q06481 763 aa17.46■□□□□ 0.39
RUBCN-204ENST00000415452 KIF21AQ7Z4S6 1674 aa17.46■□□□□ 0.39
RUBCN-204ENST00000415452 WDR97A6NE52 1622 aa17.43■□□□□ 0.38
RUBCN-204ENST00000415452 ARHGAP35Q9NRY4 1499 aa17.4■□□□□ 0.38
RUBCN-204ENST00000415452 CUL7Q14999 1698 aa17.4■□□□□ 0.38
RUBCN-204ENST00000415452 ABCA5Q8WWZ7 1642 aa17.35■□□□□ 0.37
RUBCN-204ENST00000415452 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.31■□□□□ 0.36
RUBCN-204ENST00000415452 GAPVD1Q14C86 1478 aa17.3■□□□□ 0.36
RUBCN-204ENST00000415452 TDRD9Q8NDG6 1382 aaKnown RBP17.3■□□□□ 0.36
RUBCN-204ENST00000415452 TARBP1Q13395 1621 aaKnown RBP17.3■□□□□ 0.36
RUBCN-204ENST00000415452 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
RUBCN-204ENST00000415452 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
RUBCN-204ENST00000415452 ERCC6Q03468 1493 aa17.28■□□□□ 0.36
RUBCN-204ENST00000415452 CTTNBP2Q8WZ74 1663 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms