RNA–Protein interactions for RNA: ENST00000415371.1

GCAT-203, Transcript of glycine C-acetyltransferase, humanhuman

TSL 4

Gene GCAT, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCAT-203ENST00000415371 NISCHQ9Y2I1 1504 aa54■■■■■ 6.24
GCAT-203ENST00000415371 CCDC180Q9P1Z9 1646 aa47.99■■■■■ 5.27
GCAT-203ENST00000415371 ABCC9O60706 1549 aa47.08■■■■■ 5.13
GCAT-203ENST00000415371 RB1CC1Q8TDY2 1594 aa45.21■■■■■ 4.83
GCAT-203ENST00000415371 NACADO15069 1562 aa45.17■■■■■ 4.82
GCAT-203ENST00000415371 DCAF8L2P0C7V8 631 aa45.12■■■■■ 4.81
GCAT-203ENST00000415371 ZCCHC6Q5VYS8 1495 aaKnown RBP44.95■■■■■ 4.79
GCAT-203ENST00000415371 MYO15BQ96JP2 1530 aa44.9■■■■■ 4.78
GCAT-203ENST00000415371 DCAF1Q9Y4B6 1507 aa44.67■■■■■ 4.74
GCAT-203ENST00000415371 UNC13AQ9UPW8 1703 aa44.28■■■■■ 4.68
GCAT-203ENST00000415371 PABPN1Q86U42 306 aaKnown RBP eCLIP44.02■■■■■ 4.64
GCAT-203ENST00000415371 BICRAQ9NZM4 1560 aa43.95■■■■■ 4.63
GCAT-203ENST00000415371 SCRIBQ14160 1630 aa43.78■■■■■ 4.6
GCAT-203ENST00000415371 DNAJC5BQ9UF47 199 aa43.43■■■■■ 4.54
GCAT-203ENST00000415371 SHROOM4Q9ULL8 1493 aa43.36■■■■■ 4.53
GCAT-203ENST00000415371 EIF4G1Q04637 1599 aaKnown RBP42.73■■■■■ 4.43
GCAT-203ENST00000415371 CC2D2AQ9P2K1 1620 aa42.6■■■■■ 4.41
GCAT-203ENST00000415371 CECR2Q9BXF3 1484 aa42.3■■■■■ 4.36
GCAT-203ENST00000415371 SMARCA4P51532 1647 aa41.9■■■■■ 4.3
GCAT-203ENST00000415371 BAZ1AQ9NRL2 1556 aaPredicted RBP41.82■■■■■ 4.29
GCAT-203ENST00000415371 NCAPD3P42695 1498 aa41.73■■■■■ 4.27
GCAT-203ENST00000415371 ATAD2BQ9ULI0 1458 aa41.73■■■■■ 4.27
GCAT-203ENST00000415371 MROH2BQ7Z745 1585 aa41.63■■■■■ 4.26
GCAT-203ENST00000415371 SMARCA2P51531 1590 aa41.61■■■■■ 4.25
GCAT-203ENST00000415371 PEG3Q9GZU2 1588 aa41.52■■■■■ 4.24
GCAT-203ENST00000415371 HMGXB3Q12766 1538 aa41.45■■■■■ 4.23
GCAT-203ENST00000415371 BAZ1BQ9UIG0 1483 aaKnown RBP41.31■■■■■ 4.2
GCAT-203ENST00000415371 WIZO95785 1651 aa41.18■■■■■ 4.18
GCAT-203ENST00000415371 RSF1Q96T23 1441 aaPredicted RBP41.13■■■■■ 4.17
GCAT-203ENST00000415371 NESP48681 1621 aa40.75■■■■■ 4.11
GCAT-203ENST00000415371 TOP2AP11388 1531 aaKnown RBP40.68■■■■■ 4.1
GCAT-203ENST00000415371 LAMC3Q9Y6N6 1575 aa40.59■■■■■ 4.09
GCAT-203ENST00000415371 ERCC6Q03468 1493 aa40.51■■■■■ 4.07
GCAT-203ENST00000415371 CADPSQ9ULU8 1353 aa40.49■■■■■ 4.07
GCAT-203ENST00000415371 PDS5BQ9NTI5 1447 aa40.31■■■■■ 4.04
GCAT-203ENST00000415371 CCDC88BA6NC98 1476 aa40.26■■■■■ 4.04
GCAT-203ENST00000415371 KIF21AQ7Z4S6 1674 aa40.24■■■■■ 4.03
GCAT-203ENST00000415371 CFTRP13569 1480 aa40.23■■■■■ 4.03
GCAT-203ENST00000415371 CUX2O14529 1486 aa40.17■■■■■ 4.02
GCAT-203ENST00000415371 THOC2Q8NI27 1593 aaKnown RBP40.12■■■■■ 4.01
GCAT-203ENST00000415371 FANCD2Q9BXW9 1451 aa40■■■■□ 3.99
GCAT-203ENST00000415371 SUPT5HO00267 1087 aaKnown RBP39.97■■■■□ 3.99
GCAT-203ENST00000415371 CEP164Q9UPV0 1460 aa39.93■■■■□ 3.98
GCAT-203ENST00000415371 MRC2Q9UBG0 1479 aa39.89■■■■□ 3.98
GCAT-203ENST00000415371 PRDM2Q13029 1718 aa39.88■■■■□ 3.98
GCAT-203ENST00000415371 WDR62O43379 1518 aa39.79■■■■□ 3.96
GCAT-203ENST00000415371 URB2Q14146 1524 aaKnown RBP39.64■■■■□ 3.94
GCAT-203ENST00000415371 TOPBP1Q92547 1522 aa39.36■■■■□ 3.89
GCAT-203ENST00000415371 ABCC8Q09428 1581 aa39.33■■■■□ 3.89
GCAT-203ENST00000415371 DNMBPQ6XZF7 1577 aa39.28■■■■□ 3.88
GCAT-203ENST00000415371 DNAJC5Q9H3Z4 198 aa39.13■■■■□ 3.85
GCAT-203ENST00000415371 IFT140Q96RY7 1462 aa39.11■■■■□ 3.85
GCAT-203ENST00000415371 CUX1P39880 1505 aa39.05■■■■□ 3.84
GCAT-203ENST00000415371 POLA1P09884 1462 aaPredicted RBP39.02■■■■□ 3.84
GCAT-203ENST00000415371 ZNF608Q9ULD9 1512 aaPredicted RBP38.99■■■■□ 3.83
GCAT-203ENST00000415371 TARBP1Q13395 1621 aaKnown RBP38.96■■■■□ 3.83
GCAT-203ENST00000415371 FGD5Q6ZNL6 1462 aa38.91■■■■□ 3.82
GCAT-203ENST00000415371 RAD54L2Q9Y4B4 1467 aa38.88■■■■□ 3.81
GCAT-203ENST00000415371 SOGA1O94964 1423 aa38.87■■■■□ 3.81
GCAT-203ENST00000415371 EIF4G3O43432 1585 aaKnown RBP38.77■■■■□ 3.8
GCAT-203ENST00000415371 AQRO60306 1485 aaKnown RBP eCLIP38.76■■■■□ 3.87e-13■■■■■ 28
GCAT-203ENST00000415371 WRNQ14191 1432 aaPredicted RBP eCLIP38.73■■■■□ 3.791e-6■■■■■ 58.5
GCAT-203ENST00000415371 BIVM-ERCC5R4GMW8 1640 aa38.67■■■■□ 3.78
GCAT-203ENST00000415371 TDRD9Q8NDG6 1382 aaKnown RBP38.67■■■■□ 3.78
GCAT-203ENST00000415371 TOP2BQ02880 1626 aa38.67■■■■□ 3.78
GCAT-203ENST00000415371 SYNJ1O43426 1573 aa38.65■■■■□ 3.78
GCAT-203ENST00000415371 WDR97A6NE52 1622 aa38.6■■■■□ 3.77
GCAT-203ENST00000415371 ABCA10Q8WWZ4 1543 aa38.53■■■■□ 3.76
GCAT-203ENST00000415371 OSCARQ8IYS5 282 aa38.53■■■■□ 3.76
GCAT-203ENST00000415371 GRIN2BQ13224 1484 aa38.4■■■■□ 3.74
GCAT-203ENST00000415371 GAPVD1Q14C86 1478 aa38.4■■■■□ 3.74
GCAT-203ENST00000415371 ABCA5Q8WWZ7 1642 aa38.38■■■■□ 3.74
GCAT-203ENST00000415371 SNAPC4Q5SXM2 1469 aa38.35■■■■□ 3.73
GCAT-203ENST00000415371 CHD1O14646 1710 aa38.32■■■■□ 3.73
GCAT-203ENST00000415371 PBRM1Q86U86 1689 aa38.31■■■■□ 3.72
GCAT-203ENST00000415371 MAGI1Q96QZ7 1491 aaPredicted RBP38.29■■■■□ 3.72
GCAT-203ENST00000415371 FBLN2P98095 1184 aa38.25■■■■□ 3.71
GCAT-203ENST00000415371 CHMP7Q8WUX9 453 aaPredicted RBP38.15■■■■□ 3.7
GCAT-203ENST00000415371 SYNJ2O15056 1496 aa38.15■■■■□ 3.7
GCAT-203ENST00000415371 ERICH3Q5RHP9 1530 aa38.06■■■■□ 3.68
GCAT-203ENST00000415371 ADAMTS12P58397 1594 aa37.99■■■■□ 3.67
GCAT-203ENST00000415371 FHAD1B1AJZ9 1412 aa37.95■■■■□ 3.67
GCAT-203ENST00000415371 CLASP1Q7Z460 1538 aa37.92■■■■□ 3.66
GCAT-203ENST00000415371 KIF27Q86VH2 1401 aa37.92■■■■□ 3.66
GCAT-203ENST00000415371 RIMBP3CA6NJZ7 1639 aa37.9■■■■□ 3.66
GCAT-203ENST00000415371 RIMBP3BA6NNM3 1639 aa37.9■■■■□ 3.66
GCAT-203ENST00000415371 RIMBP3Q9UFD9 1639 aa37.9■■■■□ 3.66
GCAT-203ENST00000415371 GRIN2AQ12879 1464 aa37.9■■■■□ 3.66
GCAT-203ENST00000415371 ARHGEF11O15085 1522 aa37.88■■■■□ 3.65
GCAT-203ENST00000415371 IGF1RP08069 1367 aa37.86■■■■□ 3.65
GCAT-203ENST00000415371 NUP160Q12769 1436 aa37.78■■■■□ 3.64
GCAT-203ENST00000415371 TRIM41Q8WV44 630 aa37.75■■■■□ 3.63
GCAT-203ENST00000415371 CEP170Q5SW79 1584 aa37.74■■■■□ 3.63
GCAT-203ENST00000415371 CUL7Q14999 1698 aa37.66■■■■□ 3.62
GCAT-203ENST00000415371 RUSC2Q8N2Y8 1516 aa37.65■■■■□ 3.62
GCAT-203ENST00000415371 CARMIL1Q5VZK9 1371 aa37.6■■■■□ 3.61
GCAT-203ENST00000415371 ARAP1Q96P48 1450 aa37.59■■■■□ 3.61
GCAT-203ENST00000415371 CYB5RLQ6IPT4 315 aa37.57■■■■□ 3.6
GCAT-203ENST00000415371 SHROOM2Q13796 1616 aa37.49■■■■□ 3.59
GCAT-203ENST00000415371 ERCC6L2Q5T890 1561 aa37.43■■■■□ 3.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms