RNA–Protein interactions for RNA: ENST00000415332.1

SYNGR1-206, Transcript of synaptogyrin 1, humanhuman

TSL 3

Gene SYNGR1, Length 928 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-206ENST00000415332 NISCHQ9Y2I1 1504 aa40.68■■■■■ 4.1
SYNGR1-206ENST00000415332 ABCC9O60706 1549 aa37.11■■■■□ 3.53
SYNGR1-206ENST00000415332 CCDC180Q9P1Z9 1646 aa36.67■■■■□ 3.46
SYNGR1-206ENST00000415332 DNAJC5BQ9UF47 199 aa35.23■■■■□ 3.23
SYNGR1-206ENST00000415332 RB1CC1Q8TDY2 1594 aa35.08■■■■□ 3.21
SYNGR1-206ENST00000415332 NACADO15069 1562 aa34.74■■■■□ 3.15
SYNGR1-206ENST00000415332 DCAF8L2P0C7V8 631 aa34.53■■■■□ 3.12
SYNGR1-206ENST00000415332 PABPN1Q86U42 306 aaKnown RBP eCLIP34.5■■■■□ 3.11
SYNGR1-206ENST00000415332 UNC13AQ9UPW8 1703 aa34.46■■■■□ 3.11
SYNGR1-206ENST00000415332 BICRAQ9NZM4 1560 aa34.17■■■■□ 3.06
SYNGR1-206ENST00000415332 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
SYNGR1-206ENST00000415332 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
SYNGR1-206ENST00000415332 DCAF1Q9Y4B6 1507 aa33.53■■■□□ 2.96
SYNGR1-206ENST00000415332 CC2D2AQ9P2K1 1620 aa33.51■■■□□ 2.96
SYNGR1-206ENST00000415332 SHROOM4Q9ULL8 1493 aa33.49■■■□□ 2.95
SYNGR1-206ENST00000415332 SCRIBQ14160 1630 aa33.45■■■□□ 2.95
SYNGR1-206ENST00000415332 CECR2Q9BXF3 1484 aa33.44■■■□□ 2.94
SYNGR1-206ENST00000415332 EIF4G1Q04637 1599 aaKnown RBP33.32■■■□□ 2.92
SYNGR1-206ENST00000415332 DNAJC5Q9H3Z4 198 aa32.55■■■□□ 2.8
SYNGR1-206ENST00000415332 NCAPD3P42695 1498 aa32.09■■■□□ 2.73
SYNGR1-206ENST00000415332 CUX2O14529 1486 aa32.06■■■□□ 2.72
SYNGR1-206ENST00000415332 ERCC6Q03468 1493 aa32.01■■■□□ 2.71
SYNGR1-206ENST00000415332 ATAD2BQ9ULI0 1458 aa31.96■■■□□ 2.71
SYNGR1-206ENST00000415332 SMARCA4P51532 1647 aa31.84■■■□□ 2.69
SYNGR1-206ENST00000415332 NESP48681 1621 aa31.8■■■□□ 2.68
SYNGR1-206ENST00000415332 SMARCA2P51531 1590 aa31.8■■■□□ 2.68
SYNGR1-206ENST00000415332 HMGXB3Q12766 1538 aa31.8■■■□□ 2.68
SYNGR1-206ENST00000415332 BAZ1BQ9UIG0 1483 aaKnown RBP31.6■■■□□ 2.65
SYNGR1-206ENST00000415332 BAZ1AQ9NRL2 1556 aaPredicted RBP31.57■■■□□ 2.64
SYNGR1-206ENST00000415332 THOC2Q8NI27 1593 aaKnown RBP31.54■■■□□ 2.64
SYNGR1-206ENST00000415332 PEG3Q9GZU2 1588 aa31.51■■■□□ 2.63
SYNGR1-206ENST00000415332 LAMC3Q9Y6N6 1575 aa31.43■■■□□ 2.62
SYNGR1-206ENST00000415332 KIF21AQ7Z4S6 1674 aa31.4■■■□□ 2.62
SYNGR1-206ENST00000415332 MROH2BQ7Z745 1585 aa31.39■■■□□ 2.61
SYNGR1-206ENST00000415332 PDS5BQ9NTI5 1447 aa31.22■■■□□ 2.59
SYNGR1-206ENST00000415332 CADPSQ9ULU8 1353 aa31.08■■■□□ 2.57
SYNGR1-206ENST00000415332 WIZO95785 1651 aa31.03■■■□□ 2.56
SYNGR1-206ENST00000415332 MRC2Q9UBG0 1479 aa31.01■■■□□ 2.56
SYNGR1-206ENST00000415332 TRIM41Q8WV44 630 aa30.99■■■□□ 2.55
SYNGR1-206ENST00000415332 WDR62O43379 1518 aa30.97■■■□□ 2.55
SYNGR1-206ENST00000415332 CEP164Q9UPV0 1460 aa30.81■■■□□ 2.52
SYNGR1-206ENST00000415332 FANCD2Q9BXW9 1451 aa30.76■■■□□ 2.51
SYNGR1-206ENST00000415332 CFTRP13569 1480 aa30.66■■■□□ 2.5
SYNGR1-206ENST00000415332 URB2Q14146 1524 aaKnown RBP30.57■■■□□ 2.48
SYNGR1-206ENST00000415332 RSF1Q96T23 1441 aaPredicted RBP30.56■■■□□ 2.48
SYNGR1-206ENST00000415332 OSCARQ8IYS5 282 aa30.54■■■□□ 2.48
SYNGR1-206ENST00000415332 TOP2AP11388 1531 aaKnown RBP30.52■■■□□ 2.48
SYNGR1-206ENST00000415332 PRDM2Q13029 1718 aa30.39■■■□□ 2.46
SYNGR1-206ENST00000415332 RIMBP3CA6NJZ7 1639 aa30.28■■■□□ 2.44
SYNGR1-206ENST00000415332 RIMBP3BA6NNM3 1639 aa30.28■■■□□ 2.44
SYNGR1-206ENST00000415332 RIMBP3Q9UFD9 1639 aa30.28■■■□□ 2.44
SYNGR1-206ENST00000415332 ZNF608Q9ULD9 1512 aaPredicted RBP30.27■■■□□ 2.44
SYNGR1-206ENST00000415332 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
SYNGR1-206ENST00000415332 IFT140Q96RY7 1462 aa30.19■■■□□ 2.42
SYNGR1-206ENST00000415332 TOPBP1Q92547 1522 aa30.15■■■□□ 2.42
SYNGR1-206ENST00000415332 ARHGEF11O15085 1522 aa30.11■■■□□ 2.41
SYNGR1-206ENST00000415332 EIF4G3O43432 1585 aaKnown RBP30.07■■■□□ 2.4
SYNGR1-206ENST00000415332 DNMBPQ6XZF7 1577 aa29.98■■■□□ 2.39
SYNGR1-206ENST00000415332 CHD1O14646 1710 aa29.97■■■□□ 2.39
SYNGR1-206ENST00000415332 ABCC8Q09428 1581 aa29.97■■■□□ 2.39
SYNGR1-206ENST00000415332 AQRO60306 1485 aaKnown RBP eCLIP29.93■■■□□ 2.381e-7■■■■■ 32.4
SYNGR1-206ENST00000415332 TARBP1Q13395 1621 aaKnown RBP29.93■■■□□ 2.38
SYNGR1-206ENST00000415332 CYB5RLQ6IPT4 315 aa29.91■■■□□ 2.38
SYNGR1-206ENST00000415332 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
SYNGR1-206ENST00000415332 ARAP1Q96P48 1450 aa29.8■■■□□ 2.36
SYNGR1-206ENST00000415332 FBLN2P98095 1184 aa29.78■■■□□ 2.36
SYNGR1-206ENST00000415332 RAD54L2Q9Y4B4 1467 aa29.75■■■□□ 2.35
SYNGR1-206ENST00000415332 TRHP20396 242 aaPredicted RBP29.68■■■□□ 2.34
SYNGR1-206ENST00000415332 TDRD9Q8NDG6 1382 aaKnown RBP29.67■■■□□ 2.34
SYNGR1-206ENST00000415332 SOGA1O94964 1423 aa29.65■■■□□ 2.34
SYNGR1-206ENST00000415332 SNAPC4Q5SXM2 1469 aa29.59■■■□□ 2.33
SYNGR1-206ENST00000415332 FGD5Q6ZNL6 1462 aa29.57■■■□□ 2.32
SYNGR1-206ENST00000415332 CLASP1Q7Z460 1538 aa29.55■■■□□ 2.32
SYNGR1-206ENST00000415332 CUX1P39880 1505 aa29.5■■■□□ 2.31
SYNGR1-206ENST00000415332 WDR97A6NE52 1622 aa29.5■■■□□ 2.31
SYNGR1-206ENST00000415332 SYNJ1O43426 1573 aa29.47■■■□□ 2.31
SYNGR1-206ENST00000415332 CHMP7Q8WUX9 453 aaPredicted RBP29.46■■■□□ 2.31
SYNGR1-206ENST00000415332 MAGI1Q96QZ7 1491 aaPredicted RBP29.44■■■□□ 2.3
SYNGR1-206ENST00000415332 GRIN2BQ13224 1484 aa29.42■■■□□ 2.3
SYNGR1-206ENST00000415332 PBRM1Q86U86 1689 aa29.37■■■□□ 2.29
SYNGR1-206ENST00000415332 SYNJ2O15056 1496 aa29.36■■■□□ 2.29
SYNGR1-206ENST00000415332 GAPVD1Q14C86 1478 aa29.28■■■□□ 2.28
SYNGR1-206ENST00000415332 ABCA5Q8WWZ7 1642 aa29.22■■■□□ 2.27
SYNGR1-206ENST00000415332 ABCA10Q8WWZ4 1543 aa29.19■■■□□ 2.26
SYNGR1-206ENST00000415332 ERCC6L2Q5T890 1561 aa29.14■■■□□ 2.26
SYNGR1-206ENST00000415332 AEBP2Q6ZN18 517 aaPredicted RBP29.08■■■□□ 2.25
SYNGR1-206ENST00000415332 GRIN2AQ12879 1464 aa29.06■■■□□ 2.24
SYNGR1-206ENST00000415332 CEP170Q5SW79 1584 aa29.03■■■□□ 2.24
SYNGR1-206ENST00000415332 ADAMTS12P58397 1594 aa29.02■■■□□ 2.24
SYNGR1-206ENST00000415332 NUP160Q12769 1436 aa28.97■■■□□ 2.23
SYNGR1-206ENST00000415332 WRNQ14191 1432 aaPredicted RBP eCLIP28.95■■■□□ 2.23
SYNGR1-206ENST00000415332 SUPT5HO00267 1087 aaKnown RBP28.93■■■□□ 2.22
SYNGR1-206ENST00000415332 SHROOM2Q13796 1616 aa28.93■■■□□ 2.22
SYNGR1-206ENST00000415332 BIVM-ERCC5R4GMW8 1640 aa28.92■■■□□ 2.22
SYNGR1-206ENST00000415332 TOP2BQ02880 1626 aa28.89■■■□□ 2.22
SYNGR1-206ENST00000415332 FHAD1B1AJZ9 1412 aa28.87■■■□□ 2.21
SYNGR1-206ENST00000415332 KIF13AQ9H1H9 1805 aa28.83■■■□□ 2.21
SYNGR1-206ENST00000415332 ERICH3Q5RHP9 1530 aa28.79■■■□□ 2.2
SYNGR1-206ENST00000415332 PRG4Q92954 1404 aaPredicted RBP28.73■■■□□ 2.19
SYNGR1-206ENST00000415332 JPH4Q96JJ6 628 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms