RNA–Protein interactions for RNA: ENST00000415296.5

PITPNB-203, Transcript of phosphatidylinositol transfer protein beta, humanhuman

TSL 3

Gene PITPNB, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PITPNB-203ENST00000415296 AEBP2Q6ZN18 517 aaPredicted RBP27.47■■□□□ 1.99
PITPNB-203ENST00000415296 NISCHQ9Y2I1 1504 aa27.46■■□□□ 1.99
PITPNB-203ENST00000415296 CHIC1Q5VXU3 224 aa25.64■■□□□ 1.7
PITPNB-203ENST00000415296 ABCC9O60706 1549 aa24.87■■□□□ 1.57
PITPNB-203ENST00000415296 CCDC180Q9P1Z9 1646 aa24.64■■□□□ 1.54
PITPNB-203ENST00000415296 DNAJC5BQ9UF47 199 aa23.54■■□□□ 1.36
PITPNB-203ENST00000415296 RB1CC1Q8TDY2 1594 aa23.52■■□□□ 1.36
PITPNB-203ENST00000415296 SENP3Q9H4L4 574 aaPredicted RBP23.45■■□□□ 1.34
PITPNB-203ENST00000415296 NACADO15069 1562 aa23.33■■□□□ 1.33
PITPNB-203ENST00000415296 DCAF8L2P0C7V8 631 aa23.22■■□□□ 1.31
PITPNB-203ENST00000415296 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
PITPNB-203ENST00000415296 PHF23Q9BUL5 403 aaPredicted RBP23.1■■□□□ 1.29
PITPNB-203ENST00000415296 UNC13AQ9UPW8 1703 aa23.1■■□□□ 1.29
PITPNB-203ENST00000415296 BICRAQ9NZM4 1560 aa22.96■■□□□ 1.27
PITPNB-203ENST00000415296 MYO15BQ96JP2 1530 aa22.94■■□□□ 1.26
PITPNB-203ENST00000415296 ZCCHC6Q5VYS8 1495 aaKnown RBP22.73■■□□□ 1.23
PITPNB-203ENST00000415296 DCAF1Q9Y4B6 1507 aa22.62■■□□□ 1.21
PITPNB-203ENST00000415296 SCRIBQ14160 1630 aa22.53■■□□□ 1.2
PITPNB-203ENST00000415296 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
PITPNB-203ENST00000415296 CC2D2AQ9P2K1 1620 aa22.45■■□□□ 1.18
PITPNB-203ENST00000415296 CECR2Q9BXF3 1484 aa22.38■■□□□ 1.17
PITPNB-203ENST00000415296 EIF4G1Q04637 1599 aaKnown RBP22.35■■□□□ 1.17
PITPNB-203ENST00000415296 FOXD1Q16676 465 aa21.94■■□□□ 1.1
PITPNB-203ENST00000415296 DNAJC5Q9H3Z4 198 aa21.6■■□□□ 1.05
PITPNB-203ENST00000415296 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
PITPNB-203ENST00000415296 ATAD2BQ9ULI0 1458 aa21.51■■□□□ 1.03
PITPNB-203ENST00000415296 SMARCA4P51532 1647 aa21.45■■□□□ 1.02
PITPNB-203ENST00000415296 ERCC6Q03468 1493 aa21.41■■□□□ 1.02
PITPNB-203ENST00000415296 CUX2O14529 1486 aa21.4■■□□□ 1.02
PITPNB-203ENST00000415296 HMGXB3Q12766 1538 aa21.39■■□□□ 1.01
PITPNB-203ENST00000415296 SMARCA2P51531 1590 aa21.38■■□□□ 1.01
PITPNB-203ENST00000415296 NESP48681 1621 aa21.37■■□□□ 1.01
PITPNB-203ENST00000415296 BAZ1AQ9NRL2 1556 aaPredicted RBP21.27■■□□□ 1
PITPNB-203ENST00000415296 BAZ1BQ9UIG0 1483 aaKnown RBP21.26■□□□□ 0.99
PITPNB-203ENST00000415296 PEG3Q9GZU2 1588 aa21.22■□□□□ 0.99
PITPNB-203ENST00000415296 MROH2BQ7Z745 1585 aa21.2■□□□□ 0.98
PITPNB-203ENST00000415296 THOC2Q8NI27 1593 aaKnown RBP21.14■□□□□ 0.97
PITPNB-203ENST00000415296 LAMC3Q9Y6N6 1575 aa21.08■□□□□ 0.97
PITPNB-203ENST00000415296 KIF21AQ7Z4S6 1674 aa21.05■□□□□ 0.96
PITPNB-203ENST00000415296 WIZO95785 1651 aa20.94■□□□□ 0.94
PITPNB-203ENST00000415296 PDS5BQ9NTI5 1447 aa20.94■□□□□ 0.94
PITPNB-203ENST00000415296 POTEDQ86YR6 584 aa20.93■□□□□ 0.94
PITPNB-203ENST00000415296 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
PITPNB-203ENST00000415296 MRC2Q9UBG0 1479 aa20.81■□□□□ 0.92
PITPNB-203ENST00000415296 WDR62O43379 1518 aa20.78■□□□□ 0.92
PITPNB-203ENST00000415296 CEP164Q9UPV0 1460 aa20.69■□□□□ 0.9
PITPNB-203ENST00000415296 RSF1Q96T23 1441 aaPredicted RBP20.69■□□□□ 0.9
PITPNB-203ENST00000415296 FANCD2Q9BXW9 1451 aa20.68■□□□□ 0.9
PITPNB-203ENST00000415296 MSH5O43196 834 aa20.66■□□□□ 0.9
PITPNB-203ENST00000415296 CFTRP13569 1480 aa20.65■□□□□ 0.9
PITPNB-203ENST00000415296 TRIM41Q8WV44 630 aa20.62■□□□□ 0.89
PITPNB-203ENST00000415296 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
PITPNB-203ENST00000415296 URB2Q14146 1524 aaKnown RBP20.57■□□□□ 0.88
PITPNB-203ENST00000415296 CCDC88BA6NC98 1476 aa20.41■□□□□ 0.86
PITPNB-203ENST00000415296 PRDM2Q13029 1718 aa20.41■□□□□ 0.86
PITPNB-203ENST00000415296 OSCARQ8IYS5 282 aa20.4■□□□□ 0.86
PITPNB-203ENST00000415296 PIAS4Q8N2W9 510 aaPredicted RBP20.35■□□□□ 0.85
PITPNB-203ENST00000415296 ZNF608Q9ULD9 1512 aaPredicted RBP20.35■□□□□ 0.85
PITPNB-203ENST00000415296 TOPBP1Q92547 1522 aa20.28■□□□□ 0.84
PITPNB-203ENST00000415296 IFT140Q96RY7 1462 aa20.27■□□□□ 0.84
PITPNB-203ENST00000415296 PLPPR3Q6T4P5 718 aa20.26■□□□□ 0.83
PITPNB-203ENST00000415296 RIMBP3CA6NJZ7 1639 aa20.23■□□□□ 0.83
PITPNB-203ENST00000415296 RIMBP3BA6NNM3 1639 aa20.23■□□□□ 0.83
PITPNB-203ENST00000415296 RIMBP3Q9UFD9 1639 aa20.23■□□□□ 0.83
PITPNB-203ENST00000415296 PPP6R1Q9UPN7 881 aa20.2■□□□□ 0.82
PITPNB-203ENST00000415296 EIF4G3O43432 1585 aaKnown RBP20.19■□□□□ 0.82
PITPNB-203ENST00000415296 DNMBPQ6XZF7 1577 aa20.17■□□□□ 0.82
PITPNB-203ENST00000415296 ARHGEF11O15085 1522 aa20.14■□□□□ 0.81
PITPNB-203ENST00000415296 TARBP1Q13395 1621 aaKnown RBP20.13■□□□□ 0.81
PITPNB-203ENST00000415296 ABCC8Q09428 1581 aa20.12■□□□□ 0.81
PITPNB-203ENST00000415296 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.816e-7■■■□□ 16.7
PITPNB-203ENST00000415296 POLA1P09884 1462 aaPredicted RBP20.08■□□□□ 0.81
PITPNB-203ENST00000415296 ADRA2BP18089 450 aa20.08■□□□□ 0.81
PITPNB-203ENST00000415296 CHD1O14646 1710 aa20.07■□□□□ 0.8
PITPNB-203ENST00000415296 RAD54L2Q9Y4B4 1467 aa20.05■□□□□ 0.8
PITPNB-203ENST00000415296 CYB5RLQ6IPT4 315 aa19.99■□□□□ 0.79
PITPNB-203ENST00000415296 TDRD9Q8NDG6 1382 aaKnown RBP19.97■□□□□ 0.79
PITPNB-203ENST00000415296 FBLN2P98095 1184 aa19.97■□□□□ 0.79
PITPNB-203ENST00000415296 ARAP1Q96P48 1450 aa19.96■□□□□ 0.79
PITPNB-203ENST00000415296 SOGA1O94964 1423 aa19.95■□□□□ 0.78
PITPNB-203ENST00000415296 FGD5Q6ZNL6 1462 aa19.93■□□□□ 0.78
PITPNB-203ENST00000415296 CUX1P39880 1505 aa19.92■□□□□ 0.78
PITPNB-203ENST00000415296 SNAPC4Q5SXM2 1469 aa19.9■□□□□ 0.78
PITPNB-203ENST00000415296 CLASP1Q7Z460 1538 aa19.84■□□□□ 0.77
PITPNB-203ENST00000415296 WDR97A6NE52 1622 aa19.81■□□□□ 0.76
PITPNB-203ENST00000415296 TRHP20396 242 aaPredicted RBP19.78■□□□□ 0.76
PITPNB-203ENST00000415296 GRIN2BQ13224 1484 aa19.78■□□□□ 0.76
PITPNB-203ENST00000415296 MAGI1Q96QZ7 1491 aaPredicted RBP19.78■□□□□ 0.76
PITPNB-203ENST00000415296 CHMP7Q8WUX9 453 aaPredicted RBP19.77■□□□□ 0.76
PITPNB-203ENST00000415296 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
PITPNB-203ENST00000415296 SYNJ2O15056 1496 aa19.73■□□□□ 0.75
PITPNB-203ENST00000415296 PBRM1Q86U86 1689 aa19.73■□□□□ 0.75
PITPNB-203ENST00000415296 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
PITPNB-203ENST00000415296 ABCA5Q8WWZ7 1642 aa19.68■□□□□ 0.74
PITPNB-203ENST00000415296 ABCA10Q8WWZ4 1543 aa19.66■□□□□ 0.74
PITPNB-203ENST00000415296 SUPT5HO00267 1087 aaKnown RBP19.66■□□□□ 0.74
PITPNB-203ENST00000415296 ERCC6L2Q5T890 1561 aa19.59■□□□□ 0.73
PITPNB-203ENST00000415296 GRIN2AQ12879 1464 aa19.55■□□□□ 0.72
PITPNB-203ENST00000415296 ADAMTS12P58397 1594 aa19.53■□□□□ 0.72
PITPNB-203ENST00000415296 CEP170Q5SW79 1584 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms