RNA–Protein interactions for RNA: ENST00000415276.2

HCG27-203, Transcript of HLA complex group 27, humanhuman

TSL 3

Gene HCG27, Length 685 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG27-203ENST00000415276 NISCHQ9Y2I1 1504 aa31.93■■■□□ 2.7
HCG27-203ENST00000415276 ABCC9O60706 1549 aa29.88■■■□□ 2.37
HCG27-203ENST00000415276 CCDC180Q9P1Z9 1646 aa29.14■■■□□ 2.26
HCG27-203ENST00000415276 DNAJC5BQ9UF47 199 aa28.8■■■□□ 2.2
HCG27-203ENST00000415276 RB1CC1Q8TDY2 1594 aa28.13■■■□□ 2.09
HCG27-203ENST00000415276 NACADO15069 1562 aa27.73■■■□□ 2.03
HCG27-203ENST00000415276 PABPN1Q86U42 306 aaKnown RBP eCLIP27.64■■■□□ 2.02
HCG27-203ENST00000415276 UNC13AQ9UPW8 1703 aa27.58■■■□□ 2.01
HCG27-203ENST00000415276 BICRAQ9NZM4 1560 aa27.31■■□□□ 1.96
HCG27-203ENST00000415276 DCAF8L2P0C7V8 631 aa27.29■■□□□ 1.96
HCG27-203ENST00000415276 DNAJC5Q9H3Z4 198 aa27.17■■□□□ 1.94
HCG27-203ENST00000415276 MYO15BQ96JP2 1530 aa27.05■■□□□ 1.92
HCG27-203ENST00000415276 CECR2Q9BXF3 1484 aa27.04■■□□□ 1.92
HCG27-203ENST00000415276 CC2D2AQ9P2K1 1620 aa27.01■■□□□ 1.92
HCG27-203ENST00000415276 SHROOM4Q9ULL8 1493 aa26.9■■□□□ 1.9
HCG27-203ENST00000415276 EIF4G1Q04637 1599 aaKnown RBP26.72■■□□□ 1.87
HCG27-203ENST00000415276 SCRIBQ14160 1630 aa26.4■■□□□ 1.82
HCG27-203ENST00000415276 DCAF1Q9Y4B6 1507 aa26.35■■□□□ 1.81
HCG27-203ENST00000415276 ZCCHC6Q5VYS8 1495 aaKnown RBP26.25■■□□□ 1.79
HCG27-203ENST00000415276 CUX2O14529 1486 aa26.19■■□□□ 1.78
HCG27-203ENST00000415276 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
HCG27-203ENST00000415276 NCAPD3P42695 1498 aa25.56■■□□□ 1.68
HCG27-203ENST00000415276 TRIM41Q8WV44 630 aa25.56■■□□□ 1.68
HCG27-203ENST00000415276 NESP48681 1621 aa25.41■■□□□ 1.66
HCG27-203ENST00000415276 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.66
HCG27-203ENST00000415276 ATAD2BQ9ULI0 1458 aa25.34■■□□□ 1.65
HCG27-203ENST00000415276 HMGXB3Q12766 1538 aa25.32■■□□□ 1.64
HCG27-203ENST00000415276 SMARCA2P51531 1590 aa25.27■■□□□ 1.64
HCG27-203ENST00000415276 LAMC3Q9Y6N6 1575 aa25.18■■□□□ 1.62
HCG27-203ENST00000415276 KIF21AQ7Z4S6 1674 aa25.16■■□□□ 1.62
HCG27-203ENST00000415276 SMARCA4P51532 1647 aa25.12■■□□□ 1.61
HCG27-203ENST00000415276 BAZ1BQ9UIG0 1483 aaKnown RBP25.06■■□□□ 1.6
HCG27-203ENST00000415276 PDS5BQ9NTI5 1447 aa25.03■■□□□ 1.6
HCG27-203ENST00000415276 BAZ1AQ9NRL2 1556 aaPredicted RBP24.94■■□□□ 1.58
HCG27-203ENST00000415276 PEG3Q9GZU2 1588 aa24.91■■□□□ 1.58
HCG27-203ENST00000415276 MRC2Q9UBG0 1479 aa24.84■■□□□ 1.57
HCG27-203ENST00000415276 WDR62O43379 1518 aa24.84■■□□□ 1.57
HCG27-203ENST00000415276 OSCARQ8IYS5 282 aa24.82■■□□□ 1.56
HCG27-203ENST00000415276 CADPSQ9ULU8 1353 aa24.72■■□□□ 1.55
HCG27-203ENST00000415276 RIMBP3CA6NJZ7 1639 aa24.63■■□□□ 1.53
HCG27-203ENST00000415276 RIMBP3BA6NNM3 1639 aa24.63■■□□□ 1.53
HCG27-203ENST00000415276 RIMBP3Q9UFD9 1639 aa24.63■■□□□ 1.53
HCG27-203ENST00000415276 CEP164Q9UPV0 1460 aa24.58■■□□□ 1.52
HCG27-203ENST00000415276 MROH2BQ7Z745 1585 aa24.56■■□□□ 1.52
HCG27-203ENST00000415276 FANCD2Q9BXW9 1451 aa24.45■■□□□ 1.5
HCG27-203ENST00000415276 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
HCG27-203ENST00000415276 TRHP20396 242 aaPredicted RBP24.31■■□□□ 1.48
HCG27-203ENST00000415276 AEBP2Q6ZN18 517 aaPredicted RBP24.3■■□□□ 1.48
HCG27-203ENST00000415276 URB2Q14146 1524 aaKnown RBP24.3■■□□□ 1.48
HCG27-203ENST00000415276 CYB5RLQ6IPT4 315 aa24.28■■□□□ 1.48
HCG27-203ENST00000415276 WIZO95785 1651 aa24.27■■□□□ 1.48
HCG27-203ENST00000415276 CFTRP13569 1480 aa24.26■■□□□ 1.47
HCG27-203ENST00000415276 ZNF608Q9ULD9 1512 aaPredicted RBP24.13■■□□□ 1.45
HCG27-203ENST00000415276 IFT140Q96RY7 1462 aa24.12■■□□□ 1.45
HCG27-203ENST00000415276 PRDM2Q13029 1718 aa24.1■■□□□ 1.45
HCG27-203ENST00000415276 ARAP1Q96P48 1450 aa24.09■■□□□ 1.45
HCG27-203ENST00000415276 CHD1O14646 1710 aa24.05■■□□□ 1.44
HCG27-203ENST00000415276 EIF4G3O43432 1585 aaKnown RBP24.01■■□□□ 1.43
HCG27-203ENST00000415276 RSF1Q96T23 1441 aaPredicted RBP23.99■■□□□ 1.43
HCG27-203ENST00000415276 TOPBP1Q92547 1522 aa23.89■■□□□ 1.42
HCG27-203ENST00000415276 TOP2AP11388 1531 aaKnown RBP23.89■■□□□ 1.41
HCG27-203ENST00000415276 ABCC8Q09428 1581 aa23.84■■□□□ 1.41
HCG27-203ENST00000415276 FBLN2P98095 1184 aa23.82■■□□□ 1.4
HCG27-203ENST00000415276 AQRO60306 1485 aaKnown RBP eCLIP23.8■■□□□ 1.41e-9■■■■□ 26.3
HCG27-203ENST00000415276 TARBP1Q13395 1621 aaKnown RBP23.78■■□□□ 1.4
HCG27-203ENST00000415276 DNMBPQ6XZF7 1577 aa23.75■■□□□ 1.39
HCG27-203ENST00000415276 CLASP1Q7Z460 1538 aa23.69■■□□□ 1.38
HCG27-203ENST00000415276 SYNJ1O43426 1573 aa23.63■■□□□ 1.37
HCG27-203ENST00000415276 CCDC88BA6NC98 1476 aa23.6■■□□□ 1.37
HCG27-203ENST00000415276 POLA1P09884 1462 aaPredicted RBP23.58■■□□□ 1.37
HCG27-203ENST00000415276 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
HCG27-203ENST00000415276 WDR97A6NE52 1622 aa23.53■■□□□ 1.36
HCG27-203ENST00000415276 CHMP7Q8WUX9 453 aaPredicted RBP23.53■■□□□ 1.36
HCG27-203ENST00000415276 TDRD9Q8NDG6 1382 aaKnown RBP23.5■■□□□ 1.35
HCG27-203ENST00000415276 GAPVD1Q14C86 1478 aa23.49■■□□□ 1.35
HCG27-203ENST00000415276 MAGI1Q96QZ7 1491 aaPredicted RBP23.49■■□□□ 1.35
HCG27-203ENST00000415276 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
HCG27-203ENST00000415276 SOGA1O94964 1423 aa23.46■■□□□ 1.35
HCG27-203ENST00000415276 SYNJ2O15056 1496 aa23.41■■□□□ 1.34
HCG27-203ENST00000415276 GRIN2BQ13224 1484 aa23.36■■□□□ 1.33
HCG27-203ENST00000415276 KIF13AQ9H1H9 1805 aa23.33■■□□□ 1.33
HCG27-203ENST00000415276 ILDR1Q86SU0 546 aaPredicted RBP23.33■■□□□ 1.33
HCG27-203ENST00000415276 FGD5Q6ZNL6 1462 aa23.3■■□□□ 1.32
HCG27-203ENST00000415276 PBRM1Q86U86 1689 aa23.3■■□□□ 1.32
HCG27-203ENST00000415276 SUPT5HO00267 1087 aaKnown RBP23.22■■□□□ 1.31
HCG27-203ENST00000415276 ERCC6L2Q5T890 1561 aa23.22■■□□□ 1.31
HCG27-203ENST00000415276 CUX1P39880 1505 aa23.13■■□□□ 1.29
HCG27-203ENST00000415276 CEP170Q5SW79 1584 aa23.13■■□□□ 1.29
HCG27-203ENST00000415276 KDM4FA0A1W2PPD8 638 aa23.09■■□□□ 1.29
HCG27-203ENST00000415276 SHROOM2Q13796 1616 aa23.08■■□□□ 1.28
HCG27-203ENST00000415276 ABCA5Q8WWZ7 1642 aa23.08■■□□□ 1.28
HCG27-203ENST00000415276 GRIN2AQ12879 1464 aa23.07■■□□□ 1.28
HCG27-203ENST00000415276 NUP160Q12769 1436 aa23.01■■□□□ 1.27
HCG27-203ENST00000415276 ABCA10Q8WWZ4 1543 aa23.01■■□□□ 1.27
HCG27-203ENST00000415276 ABCC10Q5T3U5 1492 aa23■■□□□ 1.27
HCG27-203ENST00000415276 FAM69CQ0P6D2 419 aa23■■□□□ 1.27
HCG27-203ENST00000415276 KDM6BO15054 1643 aa23■■□□□ 1.27
HCG27-203ENST00000415276 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
HCG27-203ENST00000415276 DIP2BQ9P265 1576 aa22.93■■□□□ 1.26
HCG27-203ENST00000415276 MAPKBP1O60336 1514 aa22.92■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms