RNA–Protein interactions for RNA: ENST00000415196.1

FAM228A-202, Transcript of family with sequence similarity 228 member A, humanhuman

APPRIS ALT2 TSL 2

Gene FAM228A, Length 516 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228A-202ENST00000415196 NISCHQ9Y2I1 1504 aa31.89■■■□□ 2.7
FAM228A-202ENST00000415196 CCDC180Q9P1Z9 1646 aa28.34■■■□□ 2.13
FAM228A-202ENST00000415196 ABCC9O60706 1549 aa27.51■■□□□ 1.99
FAM228A-202ENST00000415196 NACADO15069 1562 aa26.62■■□□□ 1.85
FAM228A-202ENST00000415196 ZCCHC6Q5VYS8 1495 aaKnown RBP26.61■■□□□ 1.85
FAM228A-202ENST00000415196 RB1CC1Q8TDY2 1594 aa26.59■■□□□ 1.85
FAM228A-202ENST00000415196 MYO15BQ96JP2 1530 aa26.58■■□□□ 1.85
FAM228A-202ENST00000415196 AEBP2Q6ZN18 517 aaPredicted RBP26.52■■□□□ 1.84
FAM228A-202ENST00000415196 DCAF1Q9Y4B6 1507 aa26.47■■□□□ 1.83
FAM228A-202ENST00000415196 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
FAM228A-202ENST00000415196 UNC13AQ9UPW8 1703 aa25.95■■□□□ 1.74
FAM228A-202ENST00000415196 BICRAQ9NZM4 1560 aa25.78■■□□□ 1.72
FAM228A-202ENST00000415196 SCRIBQ14160 1630 aa25.75■■□□□ 1.71
FAM228A-202ENST00000415196 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
FAM228A-202ENST00000415196 SHROOM4Q9ULL8 1493 aa25.64■■□□□ 1.69
FAM228A-202ENST00000415196 CHIC1Q5VXU3 224 aa25.53■■□□□ 1.68
FAM228A-202ENST00000415196 DNAJC5BQ9UF47 199 aa25.16■■□□□ 1.62
FAM228A-202ENST00000415196 EIF4G1Q04637 1599 aaKnown RBP25.09■■□□□ 1.61
FAM228A-202ENST00000415196 CC2D2AQ9P2K1 1620 aa24.94■■□□□ 1.58
FAM228A-202ENST00000415196 CECR2Q9BXF3 1484 aa24.78■■□□□ 1.56
FAM228A-202ENST00000415196 BAZ1AQ9NRL2 1556 aaPredicted RBP24.71■■□□□ 1.55
FAM228A-202ENST00000415196 SMARCA4P51532 1647 aa24.71■■□□□ 1.55
FAM228A-202ENST00000415196 NCAPD3P42695 1498 aa24.57■■□□□ 1.52
FAM228A-202ENST00000415196 ATAD2BQ9ULI0 1458 aa24.56■■□□□ 1.52
FAM228A-202ENST00000415196 SMARCA2P51531 1590 aa24.55■■□□□ 1.52
FAM228A-202ENST00000415196 PEG3Q9GZU2 1588 aa24.54■■□□□ 1.52
FAM228A-202ENST00000415196 MROH2BQ7Z745 1585 aa24.54■■□□□ 1.52
FAM228A-202ENST00000415196 HMGXB3Q12766 1538 aa24.46■■□□□ 1.51
FAM228A-202ENST00000415196 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
FAM228A-202ENST00000415196 RSF1Q96T23 1441 aaPredicted RBP24.31■■□□□ 1.48
FAM228A-202ENST00000415196 WIZO95785 1651 aa24.25■■□□□ 1.47
FAM228A-202ENST00000415196 TOP2AP11388 1531 aaKnown RBP24.06■■□□□ 1.44
FAM228A-202ENST00000415196 LAMC3Q9Y6N6 1575 aa23.88■■□□□ 1.41
FAM228A-202ENST00000415196 NESP48681 1621 aa23.84■■□□□ 1.41
FAM228A-202ENST00000415196 CADPSQ9ULU8 1353 aa23.82■■□□□ 1.4
FAM228A-202ENST00000415196 CCDC88BA6NC98 1476 aa23.75■■□□□ 1.39
FAM228A-202ENST00000415196 CFTRP13569 1480 aa23.73■■□□□ 1.39
FAM228A-202ENST00000415196 ERCC6Q03468 1493 aa23.71■■□□□ 1.39
FAM228A-202ENST00000415196 PDS5BQ9NTI5 1447 aa23.7■■□□□ 1.38
FAM228A-202ENST00000415196 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
FAM228A-202ENST00000415196 KIF21AQ7Z4S6 1674 aa23.57■■□□□ 1.36
FAM228A-202ENST00000415196 PRDM2Q13029 1718 aa23.53■■□□□ 1.36
FAM228A-202ENST00000415196 THOC2Q8NI27 1593 aaKnown RBP23.52■■□□□ 1.36
FAM228A-202ENST00000415196 CUX2O14529 1486 aa23.52■■□□□ 1.36
FAM228A-202ENST00000415196 FANCD2Q9BXW9 1451 aa23.52■■□□□ 1.36
FAM228A-202ENST00000415196 CEP164Q9UPV0 1460 aa23.49■■□□□ 1.35
FAM228A-202ENST00000415196 MRC2Q9UBG0 1479 aa23.44■■□□□ 1.34
FAM228A-202ENST00000415196 WDR62O43379 1518 aa23.39■■□□□ 1.34
FAM228A-202ENST00000415196 URB2Q14146 1524 aaKnown RBP23.28■■□□□ 1.32
FAM228A-202ENST00000415196 ABCC8Q09428 1581 aa23.22■■□□□ 1.31
FAM228A-202ENST00000415196 TOPBP1Q92547 1522 aa23.17■■□□□ 1.3
FAM228A-202ENST00000415196 DNMBPQ6XZF7 1577 aa23.16■■□□□ 1.3
FAM228A-202ENST00000415196 IFT140Q96RY7 1462 aa23.02■■□□□ 1.28
FAM228A-202ENST00000415196 CUX1P39880 1505 aa23.02■■□□□ 1.28
FAM228A-202ENST00000415196 POLA1P09884 1462 aaPredicted RBP22.98■■□□□ 1.27
FAM228A-202ENST00000415196 FGD5Q6ZNL6 1462 aa22.92■■□□□ 1.26
FAM228A-202ENST00000415196 TARBP1Q13395 1621 aaKnown RBP22.92■■□□□ 1.26
FAM228A-202ENST00000415196 WRNQ14191 1432 aaPredicted RBP eCLIP22.91■■□□□ 1.26
FAM228A-202ENST00000415196 TOP2BQ02880 1626 aa22.88■■□□□ 1.25
FAM228A-202ENST00000415196 BIVM-ERCC5R4GMW8 1640 aa22.87■■□□□ 1.25
FAM228A-202ENST00000415196 SOGA1O94964 1423 aa22.86■■□□□ 1.25
FAM228A-202ENST00000415196 ZNF608Q9ULD9 1512 aaPredicted RBP22.85■■□□□ 1.25
FAM228A-202ENST00000415196 SYNJ1O43426 1573 aa22.84■■□□□ 1.25
FAM228A-202ENST00000415196 RAD54L2Q9Y4B4 1467 aa22.83■■□□□ 1.25
FAM228A-202ENST00000415196 WDR97A6NE52 1622 aa22.82■■□□□ 1.24
FAM228A-202ENST00000415196 EIF4G3O43432 1585 aaKnown RBP22.79■■□□□ 1.24
FAM228A-202ENST00000415196 ABCA10Q8WWZ4 1543 aa22.76■■□□□ 1.23
FAM228A-202ENST00000415196 SENP3Q9H4L4 574 aaPredicted RBP22.75■■□□□ 1.23
FAM228A-202ENST00000415196 AQRO60306 1485 aaKnown RBP eCLIP22.73■■□□□ 1.23
FAM228A-202ENST00000415196 TDRD9Q8NDG6 1382 aaKnown RBP22.69■■□□□ 1.22
FAM228A-202ENST00000415196 ABCA5Q8WWZ7 1642 aa22.64■■□□□ 1.22
FAM228A-202ENST00000415196 DNAJC5Q9H3Z4 198 aa22.64■■□□□ 1.21
FAM228A-202ENST00000415196 GRIN2BQ13224 1484 aa22.61■■□□□ 1.21
FAM228A-202ENST00000415196 GAPVD1Q14C86 1478 aa22.61■■□□□ 1.21
FAM228A-202ENST00000415196 MAGI1Q96QZ7 1491 aaPredicted RBP22.57■■□□□ 1.2
FAM228A-202ENST00000415196 PBRM1Q86U86 1689 aa22.54■■□□□ 1.2
FAM228A-202ENST00000415196 SNAPC4Q5SXM2 1469 aa22.54■■□□□ 1.2
FAM228A-202ENST00000415196 OSCARQ8IYS5 282 aa22.5■■□□□ 1.19
FAM228A-202ENST00000415196 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
FAM228A-202ENST00000415196 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
FAM228A-202ENST00000415196 PHF23Q9BUL5 403 aaPredicted RBP22.46■■□□□ 1.19
FAM228A-202ENST00000415196 CHD1O14646 1710 aa22.45■■□□□ 1.18
FAM228A-202ENST00000415196 KIF27Q86VH2 1401 aa22.44■■□□□ 1.18
FAM228A-202ENST00000415196 ADAMTS12P58397 1594 aa22.4■■□□□ 1.18
FAM228A-202ENST00000415196 CHMP7Q8WUX9 453 aaPredicted RBP22.38■■□□□ 1.17
FAM228A-202ENST00000415196 FHAD1B1AJZ9 1412 aa22.38■■□□□ 1.17
FAM228A-202ENST00000415196 TRIM41Q8WV44 630 aa22.37■■□□□ 1.17
FAM228A-202ENST00000415196 FBLN2P98095 1184 aa22.36■■□□□ 1.17
FAM228A-202ENST00000415196 IGF1RP08069 1367 aa22.33■■□□□ 1.17
FAM228A-202ENST00000415196 GRIN2AQ12879 1464 aa22.32■■□□□ 1.16
FAM228A-202ENST00000415196 CLASP1Q7Z460 1538 aa22.28■■□□□ 1.16
FAM228A-202ENST00000415196 CUL7Q14999 1698 aa22.28■■□□□ 1.16
FAM228A-202ENST00000415196 NUP160Q12769 1436 aa22.25■■□□□ 1.15
FAM228A-202ENST00000415196 RUSC2Q8N2Y8 1516 aa22.2■■□□□ 1.14
FAM228A-202ENST00000415196 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
FAM228A-202ENST00000415196 CARMIL1Q5VZK9 1371 aa22.18■■□□□ 1.14
FAM228A-202ENST00000415196 ARHGEF11O15085 1522 aa22.16■■□□□ 1.14
FAM228A-202ENST00000415196 RIMBP3CA6NJZ7 1639 aa22.12■■□□□ 1.13
FAM228A-202ENST00000415196 RIMBP3BA6NNM3 1639 aa22.12■■□□□ 1.13
FAM228A-202ENST00000415196 RIMBP3Q9UFD9 1639 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms