RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
PPM1N-206ENST00000415077 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
PPM1N-206ENST00000415077 ZCCHC6Q5VYS8 1495 aaKnown RBP35.9■■■■□ 3.34
PPM1N-206ENST00000415077 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
PPM1N-206ENST00000415077 DCAF1Q9Y4B6 1507 aa35.28■■■■□ 3.24
PPM1N-206ENST00000415077 ABCC9O60706 1549 aa35.13■■■■□ 3.21
PPM1N-206ENST00000415077 SHROOM4Q9ULL8 1493 aa35.06■■■■□ 3.2
PPM1N-206ENST00000415077 MYO15BQ96JP2 1530 aa34.82■■■■□ 3.16
PPM1N-206ENST00000415077 NACADO15069 1562 aa34.61■■■■□ 3.13
PPM1N-206ENST00000415077 RB1CC1Q8TDY2 1594 aa34.29■■■■□ 3.08
PPM1N-206ENST00000415077 SCRIBQ14160 1630 aa34.25■■■■□ 3.07
PPM1N-206ENST00000415077 SUPT5HO00267 1087 aaKnown RBP33.82■■■■□ 3
PPM1N-206ENST00000415077 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
PPM1N-206ENST00000415077 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
PPM1N-206ENST00000415077 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
PPM1N-206ENST00000415077 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
PPM1N-206ENST00000415077 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
PPM1N-206ENST00000415077 MROH2BQ7Z745 1585 aa33.03■■■□□ 2.88
PPM1N-206ENST00000415077 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
PPM1N-206ENST00000415077 SMARCA4P51532 1647 aa32.81■■■□□ 2.84
PPM1N-206ENST00000415077 WIZO95785 1651 aa32.77■■■□□ 2.84
PPM1N-206ENST00000415077 TOP2AP11388 1531 aaKnown RBP32.4■■■□□ 2.78
PPM1N-206ENST00000415077 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
PPM1N-206ENST00000415077 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
PPM1N-206ENST00000415077 ATAD2BQ9ULI0 1458 aa32.27■■■□□ 2.76
PPM1N-206ENST00000415077 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.75
PPM1N-206ENST00000415077 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
PPM1N-206ENST00000415077 CCDC88BA6NC98 1476 aa32.12■■■□□ 2.73
PPM1N-206ENST00000415077 BAZ1BQ9UIG0 1483 aaKnown RBP32.1■■■□□ 2.73
PPM1N-206ENST00000415077 NCAPD3P42695 1498 aa31.96■■■□□ 2.71
PPM1N-206ENST00000415077 HMGXB3Q12766 1538 aa31.89■■■□□ 2.7
PPM1N-206ENST00000415077 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
PPM1N-206ENST00000415077 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
PPM1N-206ENST00000415077 ABCC8Q09428 1581 aa31.49■■■□□ 2.63
PPM1N-206ENST00000415077 CFTRP13569 1480 aa31.29■■■□□ 2.6
PPM1N-206ENST00000415077 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
PPM1N-206ENST00000415077 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
PPM1N-206ENST00000415077 LOC105371045A0A1W2PR82 267 aa31.21■■■□□ 2.59
PPM1N-206ENST00000415077 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
PPM1N-206ENST00000415077 SYNJ1O43426 1573 aa31.11■■■□□ 2.57
PPM1N-206ENST00000415077 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
PPM1N-206ENST00000415077 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
PPM1N-206ENST00000415077 TOP2BQ02880 1626 aa30.97■■■□□ 2.55
PPM1N-206ENST00000415077 SOGA1O94964 1423 aa30.95■■■□□ 2.54
PPM1N-206ENST00000415077 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
PPM1N-206ENST00000415077 CUX1P39880 1505 aa30.87■■■□□ 2.53
PPM1N-206ENST00000415077 NESP48681 1621 aa30.87■■■□□ 2.53
PPM1N-206ENST00000415077 EEA1Q15075 1411 aa30.87■■■□□ 2.53
PPM1N-206ENST00000415077 LAMC3Q9Y6N6 1575 aa30.84■■■□□ 2.53
PPM1N-206ENST00000415077 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
PPM1N-206ENST00000415077 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
PPM1N-206ENST00000415077 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
PPM1N-206ENST00000415077 CSRNP3Q8WYN3 585 aa30.76■■■□□ 2.51
PPM1N-206ENST00000415077 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
PPM1N-206ENST00000415077 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
PPM1N-206ENST00000415077 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
PPM1N-206ENST00000415077 FGD5Q6ZNL6 1462 aa30.53■■■□□ 2.48
PPM1N-206ENST00000415077 TOPBP1Q92547 1522 aa30.5■■■□□ 2.47
PPM1N-206ENST00000415077 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
PPM1N-206ENST00000415077 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
PPM1N-206ENST00000415077 KIF21AQ7Z4S6 1674 aa30.46■■■□□ 2.47
PPM1N-206ENST00000415077 KIF21BO75037 1637 aa30.43■■■□□ 2.46
PPM1N-206ENST00000415077 UBTFP17480 764 aaKnown RBP30.43■■■□□ 2.46
PPM1N-206ENST00000415077 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
PPM1N-206ENST00000415077 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
PPM1N-206ENST00000415077 CUX2O14529 1486 aa30.37■■■□□ 2.45
PPM1N-206ENST00000415077 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
PPM1N-206ENST00000415077 RAPGEF2Q9Y4G8 1499 aa30.3■■■□□ 2.44
PPM1N-206ENST00000415077 RAD54L2Q9Y4B4 1467 aa30.29■■■□□ 2.44
PPM1N-206ENST00000415077 PRXQ9BXM0 1461 aa30.28■■■□□ 2.44
PPM1N-206ENST00000415077 CEP162Q5TB80 1403 aa30.26■■■□□ 2.43
PPM1N-206ENST00000415077 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
PPM1N-206ENST00000415077 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
PPM1N-206ENST00000415077 IGF1RP08069 1367 aa30.21■■■□□ 2.43
PPM1N-206ENST00000415077 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
PPM1N-206ENST00000415077 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
PPM1N-206ENST00000415077 WDR97A6NE52 1622 aa30.08■■■□□ 2.41
PPM1N-206ENST00000415077 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
PPM1N-206ENST00000415077 WDR62O43379 1518 aa30.03■■■□□ 2.4
PPM1N-206ENST00000415077 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.4
PPM1N-206ENST00000415077 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
PPM1N-206ENST00000415077 CLIP1P30622 1438 aa30■■■□□ 2.39
PPM1N-206ENST00000415077 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
PPM1N-206ENST00000415077 GAPVD1Q14C86 1478 aa29.96■■■□□ 2.39
PPM1N-206ENST00000415077 RANGAP1P46060 587 aaPredicted RBP29.94■■■□□ 2.38
PPM1N-206ENST00000415077 PCGF6Q9BYE7 350 aa29.92■■■□□ 2.38
PPM1N-206ENST00000415077 CUL7Q14999 1698 aa29.9■■■□□ 2.38
PPM1N-206ENST00000415077 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
PPM1N-206ENST00000415077 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
PPM1N-206ENST00000415077 TRIM26Q12899 539 aaPredicted RBP29.85■■■□□ 2.37
PPM1N-206ENST00000415077 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.364e-7■■■■■ 31.4
PPM1N-206ENST00000415077 PPARGC1BQ86YN6 1023 aaKnown RBP29.76■■■□□ 2.35
PPM1N-206ENST00000415077 VPS8Q8N3P4 1428 aa29.74■■■□□ 2.35
PPM1N-206ENST00000415077 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
PPM1N-206ENST00000415077 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
PPM1N-206ENST00000415077 GRIN2BQ13224 1484 aa29.69■■■□□ 2.34
PPM1N-206ENST00000415077 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
PPM1N-206ENST00000415077 ARHGAP35Q9NRY4 1499 aa29.64■■■□□ 2.34
PPM1N-206ENST00000415077 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
PPM1N-206ENST00000415077 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms