RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 NISCHQ9Y2I1 1504 aa42.73■■■■■ 4.43
PPM1N-206ENST00000415077 CCDC180Q9P1Z9 1646 aa37.14■■■■□ 3.54
PPM1N-206ENST00000415077 ZCCHC6Q5VYS8 1495 aaKnown RBP35.9■■■■□ 3.34
PPM1N-206ENST00000415077 DCAF8L2P0C7V8 631 aa35.44■■■■□ 3.26
PPM1N-206ENST00000415077 DCAF1Q9Y4B6 1507 aa35.28■■■■□ 3.24
PPM1N-206ENST00000415077 ABCC9O60706 1549 aa35.13■■■■□ 3.21
PPM1N-206ENST00000415077 SHROOM4Q9ULL8 1493 aa35.06■■■■□ 3.2
PPM1N-206ENST00000415077 MYO15BQ96JP2 1530 aa34.82■■■■□ 3.16
PPM1N-206ENST00000415077 NACADO15069 1562 aa34.61■■■■□ 3.13
PPM1N-206ENST00000415077 RB1CC1Q8TDY2 1594 aa34.29■■■■□ 3.08
PPM1N-206ENST00000415077 SCRIBQ14160 1630 aa34.25■■■■□ 3.07
PPM1N-206ENST00000415077 SUPT5HO00267 1087 aaKnown RBP33.82■■■■□ 3
PPM1N-206ENST00000415077 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
PPM1N-206ENST00000415077 BICRAQ9NZM4 1560 aa33.24■■■□□ 2.91
PPM1N-206ENST00000415077 RSF1Q96T23 1441 aaPredicted RBP33.23■■■□□ 2.91
PPM1N-206ENST00000415077 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
PPM1N-206ENST00000415077 PABPN1Q86U42 306 aaKnown RBP eCLIP33.21■■■□□ 2.91
PPM1N-206ENST00000415077 MROH2BQ7Z745 1585 aa33.03■■■□□ 2.88
PPM1N-206ENST00000415077 BAZ1AQ9NRL2 1556 aaPredicted RBP32.99■■■□□ 2.87
PPM1N-206ENST00000415077 SMARCA4P51532 1647 aa32.81■■■□□ 2.84
PPM1N-206ENST00000415077 WIZO95785 1651 aa32.77■■■□□ 2.84
PPM1N-206ENST00000415077 TOP2AP11388 1531 aaKnown RBP32.4■■■□□ 2.78
PPM1N-206ENST00000415077 CHIC1Q5VXU3 224 aa32.38■■■□□ 2.77
PPM1N-206ENST00000415077 PEG3Q9GZU2 1588 aa32.38■■■□□ 2.77
PPM1N-206ENST00000415077 ATAD2BQ9ULI0 1458 aa32.27■■■□□ 2.76
PPM1N-206ENST00000415077 EIF4G1Q04637 1599 aaKnown RBP32.26■■■□□ 2.75
PPM1N-206ENST00000415077 SMARCA2P51531 1590 aa32.23■■■□□ 2.75
PPM1N-206ENST00000415077 CCDC88BA6NC98 1476 aa32.12■■■□□ 2.73
PPM1N-206ENST00000415077 BAZ1BQ9UIG0 1483 aaKnown RBP32.1■■■□□ 2.73
PPM1N-206ENST00000415077 NCAPD3P42695 1498 aa31.96■■■□□ 2.71
PPM1N-206ENST00000415077 HMGXB3Q12766 1538 aa31.89■■■□□ 2.7
PPM1N-206ENST00000415077 TRIM41Q8WV44 630 aa31.77■■■□□ 2.68
PPM1N-206ENST00000415077 CC2D2AQ9P2K1 1620 aa31.76■■■□□ 2.67
PPM1N-206ENST00000415077 ABCC8Q09428 1581 aa31.49■■■□□ 2.63
PPM1N-206ENST00000415077 CFTRP13569 1480 aa31.29■■■□□ 2.6
PPM1N-206ENST00000415077 WRNQ14191 1432 aaPredicted RBP eCLIP31.28■■■□□ 2.6
PPM1N-206ENST00000415077 FAM9AQ8IZU1 332 aaPredicted RBP31.23■■■□□ 2.59
PPM1N-206ENST00000415077 LOC105371045A0A1W2PR82 267 aa31.21■■■□□ 2.59
PPM1N-206ENST00000415077 CADPSQ9ULU8 1353 aa31.18■■■□□ 2.58
PPM1N-206ENST00000415077 SYNJ1O43426 1573 aa31.11■■■□□ 2.57
PPM1N-206ENST00000415077 PRDM2Q13029 1718 aa31.07■■■□□ 2.56
PPM1N-206ENST00000415077 DNAJC5BQ9UF47 199 aa30.99■■■□□ 2.55
PPM1N-206ENST00000415077 TOP2BQ02880 1626 aa30.97■■■□□ 2.55
PPM1N-206ENST00000415077 SOGA1O94964 1423 aa30.95■■■□□ 2.54
PPM1N-206ENST00000415077 BIVM-ERCC5R4GMW8 1640 aa30.91■■■□□ 2.54
PPM1N-206ENST00000415077 CUX1P39880 1505 aa30.87■■■□□ 2.53
PPM1N-206ENST00000415077 NESP48681 1621 aa30.87■■■□□ 2.53
PPM1N-206ENST00000415077 EEA1Q15075 1411 aa30.87■■■□□ 2.53
PPM1N-206ENST00000415077 LAMC3Q9Y6N6 1575 aa30.84■■■□□ 2.53
PPM1N-206ENST00000415077 FANCD2Q9BXW9 1451 aa30.83■■■□□ 2.53
PPM1N-206ENST00000415077 EHMT2Q96KQ7 1210 aa30.82■■■□□ 2.52
PPM1N-206ENST00000415077 RUSC2Q8N2Y8 1516 aa30.81■■■□□ 2.52
PPM1N-206ENST00000415077 CSRNP3Q8WYN3 585 aa30.76■■■□□ 2.51
PPM1N-206ENST00000415077 PDS5BQ9NTI5 1447 aa30.64■■■□□ 2.5
PPM1N-206ENST00000415077 CEP164Q9UPV0 1460 aa30.62■■■□□ 2.49
PPM1N-206ENST00000415077 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
PPM1N-206ENST00000415077 FGD5Q6ZNL6 1462 aa30.53■■■□□ 2.48
PPM1N-206ENST00000415077 TOPBP1Q92547 1522 aa30.5■■■□□ 2.47
PPM1N-206ENST00000415077 KIF27Q86VH2 1401 aa30.49■■■□□ 2.47
PPM1N-206ENST00000415077 GOLGA3Q08378 1498 aa30.46■■■□□ 2.47
PPM1N-206ENST00000415077 KIF21AQ7Z4S6 1674 aa30.46■■■□□ 2.47
PPM1N-206ENST00000415077 KIF21BO75037 1637 aa30.43■■■□□ 2.46
PPM1N-206ENST00000415077 UBTFP17480 764 aaKnown RBP30.43■■■□□ 2.46
PPM1N-206ENST00000415077 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
PPM1N-206ENST00000415077 TNIKQ9UKE5 1360 aa30.4■■■□□ 2.46
PPM1N-206ENST00000415077 CUX2O14529 1486 aa30.37■■■□□ 2.45
PPM1N-206ENST00000415077 POLA1P09884 1462 aaPredicted RBP30.37■■■□□ 2.45
PPM1N-206ENST00000415077 RAPGEF2Q9Y4G8 1499 aa30.3■■■□□ 2.44
PPM1N-206ENST00000415077 RAD54L2Q9Y4B4 1467 aa30.29■■■□□ 2.44
PPM1N-206ENST00000415077 PRXQ9BXM0 1461 aa30.28■■■□□ 2.44
PPM1N-206ENST00000415077 CEP162Q5TB80 1403 aa30.26■■■□□ 2.43
PPM1N-206ENST00000415077 ABCA10Q8WWZ4 1543 aa30.25■■■□□ 2.43
PPM1N-206ENST00000415077 ERICH3Q5RHP9 1530 aa30.21■■■□□ 2.43
PPM1N-206ENST00000415077 IGF1RP08069 1367 aa30.21■■■□□ 2.43
PPM1N-206ENST00000415077 MRC2Q9UBG0 1479 aa30.21■■■□□ 2.43
PPM1N-206ENST00000415077 ERCC6Q03468 1493 aa30.12■■■□□ 2.41
PPM1N-206ENST00000415077 WDR97A6NE52 1622 aa30.08■■■□□ 2.41
PPM1N-206ENST00000415077 CARMIL1Q5VZK9 1371 aa30.07■■■□□ 2.4
PPM1N-206ENST00000415077 WDR62O43379 1518 aa30.03■■■□□ 2.4
PPM1N-206ENST00000415077 TDRD9Q8NDG6 1382 aaKnown RBP30.01■■■□□ 2.4
PPM1N-206ENST00000415077 TARBP1Q13395 1621 aaKnown RBP30.01■■■□□ 2.39
PPM1N-206ENST00000415077 CLIP1P30622 1438 aa30■■■□□ 2.39
PPM1N-206ENST00000415077 ABCA5Q8WWZ7 1642 aa29.96■■■□□ 2.39
PPM1N-206ENST00000415077 GAPVD1Q14C86 1478 aa29.96■■■□□ 2.39
PPM1N-206ENST00000415077 RANGAP1P46060 587 aaPredicted RBP29.94■■■□□ 2.38
PPM1N-206ENST00000415077 PCGF6Q9BYE7 350 aa29.92■■■□□ 2.38
PPM1N-206ENST00000415077 CUL7Q14999 1698 aa29.9■■■□□ 2.38
PPM1N-206ENST00000415077 THOC2Q8NI27 1593 aaKnown RBP29.89■■■□□ 2.38
PPM1N-206ENST00000415077 IFT140Q96RY7 1462 aa29.87■■■□□ 2.37
PPM1N-206ENST00000415077 TRIM26Q12899 539 aaPredicted RBP29.85■■■□□ 2.37
PPM1N-206ENST00000415077 AQRO60306 1485 aaKnown RBP eCLIP29.8■■■□□ 2.364e-7■■■■■ 31.4
PPM1N-206ENST00000415077 PPARGC1BQ86YN6 1023 aaKnown RBP29.76■■■□□ 2.35
PPM1N-206ENST00000415077 VPS8Q8N3P4 1428 aa29.74■■■□□ 2.35
PPM1N-206ENST00000415077 ZNF608Q9ULD9 1512 aaPredicted RBP29.73■■■□□ 2.35
PPM1N-206ENST00000415077 PBRM1Q86U86 1689 aa29.72■■■□□ 2.35
PPM1N-206ENST00000415077 GRIN2BQ13224 1484 aa29.69■■■□□ 2.34
PPM1N-206ENST00000415077 ARAP1Q96P48 1450 aa29.65■■■□□ 2.34
PPM1N-206ENST00000415077 ARHGAP35Q9NRY4 1499 aa29.64■■■□□ 2.34
PPM1N-206ENST00000415077 FHAD1B1AJZ9 1412 aa29.62■■■□□ 2.33
PPM1N-206ENST00000415077 EIF4G3O43432 1585 aaKnown RBP29.59■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms