RNA–Protein interactions for RNA: ENST00000415068.1

ZNF3-206, Transcript of zinc finger protein 3, humanhuman

TSL 1 (best)

Gene ZNF3, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-206ENST00000415068 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
ZNF3-206ENST00000415068 CCDC180Q9P1Z9 1646 aa26.76■■□□□ 1.87
ZNF3-206ENST00000415068 ZCCHC6Q5VYS8 1495 aaKnown RBP25.65■■□□□ 1.7
ZNF3-206ENST00000415068 DCAF1Q9Y4B6 1507 aa25.48■■□□□ 1.67
ZNF3-206ENST00000415068 MYO15BQ96JP2 1530 aa25.29■■□□□ 1.64
ZNF3-206ENST00000415068 ABCC9O60706 1549 aa25.2■■□□□ 1.62
ZNF3-206ENST00000415068 DCAF8L2P0C7V8 631 aa25.07■■□□□ 1.6
ZNF3-206ENST00000415068 NACADO15069 1562 aa25.02■■□□□ 1.6
ZNF3-206ENST00000415068 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
ZNF3-206ENST00000415068 SHROOM4Q9ULL8 1493 aa24.51■■□□□ 1.51
ZNF3-206ENST00000415068 SCRIBQ14160 1630 aa24.32■■□□□ 1.48
ZNF3-206ENST00000415068 UNC13AQ9UPW8 1703 aa24.1■■□□□ 1.45
ZNF3-206ENST00000415068 BICRAQ9NZM4 1560 aa23.98■■□□□ 1.43
ZNF3-206ENST00000415068 PABPN1Q86U42 306 aaKnown RBP eCLIP23.75■■□□□ 1.39
ZNF3-206ENST00000415068 CECR2Q9BXF3 1484 aa23.68■■□□□ 1.38
ZNF3-206ENST00000415068 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
ZNF3-206ENST00000415068 SUPT5HO00267 1087 aaKnown RBP23.63■■□□□ 1.37
ZNF3-206ENST00000415068 BAZ1AQ9NRL2 1556 aaPredicted RBP23.63■■□□□ 1.37
ZNF3-206ENST00000415068 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
ZNF3-206ENST00000415068 SMARCA4P51532 1647 aa23.48■■□□□ 1.35
ZNF3-206ENST00000415068 PEG3Q9GZU2 1588 aa23.36■■□□□ 1.33
ZNF3-206ENST00000415068 WIZO95785 1651 aa23.28■■□□□ 1.32
ZNF3-206ENST00000415068 EIF4G1Q04637 1599 aaKnown RBP23.23■■□□□ 1.31
ZNF3-206ENST00000415068 SMARCA2P51531 1590 aa23.2■■□□□ 1.3
ZNF3-206ENST00000415068 ATAD2BQ9ULI0 1458 aa23.2■■□□□ 1.3
ZNF3-206ENST00000415068 NCAPD3P42695 1498 aa23.14■■□□□ 1.29
ZNF3-206ENST00000415068 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
ZNF3-206ENST00000415068 HMGXB3Q12766 1538 aa23.01■■□□□ 1.27
ZNF3-206ENST00000415068 BAZ1BQ9UIG0 1483 aaKnown RBP22.98■■□□□ 1.27
ZNF3-206ENST00000415068 CCDC88BA6NC98 1476 aa22.92■■□□□ 1.26
ZNF3-206ENST00000415068 CC2D2AQ9P2K1 1620 aa22.88■■□□□ 1.25
ZNF3-206ENST00000415068 CHIC1Q5VXU3 224 aa22.75■■□□□ 1.23
ZNF3-206ENST00000415068 CFTRP13569 1480 aa22.53■■□□□ 1.2
ZNF3-206ENST00000415068 CADPSQ9ULU8 1353 aa22.48■■□□□ 1.19
ZNF3-206ENST00000415068 DNAJC5BQ9UF47 199 aa22.46■■□□□ 1.19
ZNF3-206ENST00000415068 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
ZNF3-206ENST00000415068 LAMC3Q9Y6N6 1575 aa22.28■■□□□ 1.16
ZNF3-206ENST00000415068 PRDM2Q13029 1718 aa22.27■■□□□ 1.16
ZNF3-206ENST00000415068 WRNQ14191 1432 aaPredicted RBP eCLIP22.25■■□□□ 1.15
ZNF3-206ENST00000415068 ABCC8Q09428 1581 aa22.2■■□□□ 1.14
ZNF3-206ENST00000415068 PDS5BQ9NTI5 1447 aa22.14■■□□□ 1.13
ZNF3-206ENST00000415068 FANCD2Q9BXW9 1451 aa22.11■■□□□ 1.13
ZNF3-206ENST00000415068 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
ZNF3-206ENST00000415068 NESP48681 1621 aa22.09■■□□□ 1.13
ZNF3-206ENST00000415068 BIVM-ERCC5R4GMW8 1640 aa22.07■■□□□ 1.12
ZNF3-206ENST00000415068 SYNJ1O43426 1573 aa22.06■■□□□ 1.12
ZNF3-206ENST00000415068 CUX1P39880 1505 aa22.02■■□□□ 1.12
ZNF3-206ENST00000415068 EEA1Q15075 1411 aa22.01■■□□□ 1.11
ZNF3-206ENST00000415068 CEP164Q9UPV0 1460 aa21.97■■□□□ 1.11
ZNF3-206ENST00000415068 DNMBPQ6XZF7 1577 aa21.91■■□□□ 1.1
ZNF3-206ENST00000415068 TOPBP1Q92547 1522 aa21.87■■□□□ 1.09
ZNF3-206ENST00000415068 SOGA1O94964 1423 aa21.86■■□□□ 1.09
ZNF3-206ENST00000415068 CSRNP3Q8WYN3 585 aa21.85■■□□□ 1.09
ZNF3-206ENST00000415068 URB2Q14146 1524 aaKnown RBP21.83■■□□□ 1.09
ZNF3-206ENST00000415068 KIF21AQ7Z4S6 1674 aa21.81■■□□□ 1.08
ZNF3-206ENST00000415068 FGD5Q6ZNL6 1462 aa21.78■■□□□ 1.08
ZNF3-206ENST00000415068 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.07
ZNF3-206ENST00000415068 RUSC2Q8N2Y8 1516 aa21.75■■□□□ 1.07
ZNF3-206ENST00000415068 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
ZNF3-206ENST00000415068 KIF27Q86VH2 1401 aa21.74■■□□□ 1.07
ZNF3-206ENST00000415068 FAM9AQ8IZU1 332 aaPredicted RBP21.74■■□□□ 1.07
ZNF3-206ENST00000415068 POLA1P09884 1462 aaPredicted RBP21.74■■□□□ 1.07
ZNF3-206ENST00000415068 ABCA10Q8WWZ4 1543 aa21.71■■□□□ 1.07
ZNF3-206ENST00000415068 WDR62O43379 1518 aa21.68■■□□□ 1.06
ZNF3-206ENST00000415068 ERCC6Q03468 1493 aa21.64■■□□□ 1.05
ZNF3-206ENST00000415068 IGF1RP08069 1367 aa21.63■■□□□ 1.05
ZNF3-206ENST00000415068 CUX2O14529 1486 aa21.61■■□□□ 1.05
ZNF3-206ENST00000415068 PRXQ9BXM0 1461 aa21.6■■□□□ 1.05
ZNF3-206ENST00000415068 RAD54L2Q9Y4B4 1467 aa21.59■■□□□ 1.05
ZNF3-206ENST00000415068 KIF21BO75037 1637 aa21.59■■□□□ 1.05
ZNF3-206ENST00000415068 TARBP1Q13395 1621 aaKnown RBP21.57■■□□□ 1.04
ZNF3-206ENST00000415068 THOC2Q8NI27 1593 aaKnown RBP21.57■■□□□ 1.04
ZNF3-206ENST00000415068 TNIKQ9UKE5 1360 aa21.56■■□□□ 1.04
ZNF3-206ENST00000415068 IFT140Q96RY7 1462 aa21.54■■□□□ 1.04
ZNF3-206ENST00000415068 WDR97A6NE52 1622 aa21.54■■□□□ 1.04
ZNF3-206ENST00000415068 GOLGA3Q08378 1498 aa21.53■■□□□ 1.04
ZNF3-206ENST00000415068 ERICH3Q5RHP9 1530 aa21.53■■□□□ 1.04
ZNF3-206ENST00000415068 CARMIL1Q5VZK9 1371 aa21.47■■□□□ 1.03
ZNF3-206ENST00000415068 ABCA5Q8WWZ7 1642 aa21.46■■□□□ 1.03
ZNF3-206ENST00000415068 GAPVD1Q14C86 1478 aa21.45■■□□□ 1.03
ZNF3-206ENST00000415068 TDRD9Q8NDG6 1382 aaKnown RBP21.43■■□□□ 1.02
ZNF3-206ENST00000415068 RAPGEF2Q9Y4G8 1499 aa21.42■■□□□ 1.02
ZNF3-206ENST00000415068 UBTFP17480 764 aaKnown RBP21.4■■□□□ 1.02
ZNF3-206ENST00000415068 CUL7Q14999 1698 aa21.37■■□□□ 1.01
ZNF3-206ENST00000415068 GRIN2BQ13224 1484 aa21.34■■□□□ 1.01
ZNF3-206ENST00000415068 AQRO60306 1485 aaKnown RBP eCLIP21.32■■□□□ 12e-7■■■■■ 35.8
ZNF3-206ENST00000415068 ZNF608Q9ULD9 1512 aaPredicted RBP21.28■■□□□ 1
ZNF3-206ENST00000415068 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
ZNF3-206ENST00000415068 CEP162Q5TB80 1403 aa21.27■■□□□ 1
ZNF3-206ENST00000415068 EHMT2Q96KQ7 1210 aa21.24■□□□□ 0.99
ZNF3-206ENST00000415068 PBRM1Q86U86 1689 aa21.21■□□□□ 0.99
ZNF3-206ENST00000415068 MAGI1Q96QZ7 1491 aaPredicted RBP21.2■□□□□ 0.98
ZNF3-206ENST00000415068 EIF4G3O43432 1585 aaKnown RBP21.18■□□□□ 0.98
ZNF3-206ENST00000415068 CLIP1P30622 1438 aa21.17■□□□□ 0.98
ZNF3-206ENST00000415068 ADAMTS12P58397 1594 aa21.14■□□□□ 0.97
ZNF3-206ENST00000415068 SYNJ2O15056 1496 aa21.08■□□□□ 0.97
ZNF3-206ENST00000415068 SNAPC4Q5SXM2 1469 aa21.08■□□□□ 0.97
ZNF3-206ENST00000415068 GRIN2AQ12879 1464 aa21.03■□□□□ 0.96
ZNF3-206ENST00000415068 CHMP7Q8WUX9 453 aaPredicted RBP21.02■□□□□ 0.96
ZNF3-206ENST00000415068 CTTNBP2Q8WZ74 1663 aa21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms