RNA–Protein interactions for RNA: ENST00000415053.5

NME6-202, Transcript of NME/NM23 nucleoside diphosphate kinase 6, humanhuman

APPRIS P1 TSL 3 BASIC

Gene NME6, Length 913 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME6-202ENST00000415053 NISCHQ9Y2I1 1504 aa26.32■■□□□ 1.8
NME6-202ENST00000415053 CCDC180Q9P1Z9 1646 aa23.19■■□□□ 1.3
NME6-202ENST00000415053 ABCC9O60706 1549 aa22.1■■□□□ 1.13
NME6-202ENST00000415053 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
NME6-202ENST00000415053 DCAF1Q9Y4B6 1507 aa21.85■■□□□ 1.09
NME6-202ENST00000415053 DCAF8L2P0C7V8 631 aa21.8■■□□□ 1.08
NME6-202ENST00000415053 MYO15BQ96JP2 1530 aa21.75■■□□□ 1.07
NME6-202ENST00000415053 NACADO15069 1562 aa21.69■■□□□ 1.06
NME6-202ENST00000415053 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
NME6-202ENST00000415053 SCRIBQ14160 1630 aa21.16■□□□□ 0.98
NME6-202ENST00000415053 SHROOM4Q9ULL8 1493 aa21.12■□□□□ 0.97
NME6-202ENST00000415053 UNC13AQ9UPW8 1703 aa20.94■□□□□ 0.94
NME6-202ENST00000415053 BICRAQ9NZM4 1560 aa20.78■□□□□ 0.92
NME6-202ENST00000415053 PABPN1Q86U42 306 aaKnown RBP eCLIP20.73■□□□□ 0.91
NME6-202ENST00000415053 BAZ1AQ9NRL2 1556 aaPredicted RBP20.42■□□□□ 0.86
NME6-202ENST00000415053 CECR2Q9BXF3 1484 aa20.38■□□□□ 0.85
NME6-202ENST00000415053 SMARCA4P51532 1647 aa20.31■□□□□ 0.84
NME6-202ENST00000415053 EIF4G1Q04637 1599 aaKnown RBP20.25■□□□□ 0.83
NME6-202ENST00000415053 MROH2BQ7Z745 1585 aa20.25■□□□□ 0.83
NME6-202ENST00000415053 RSF1Q96T23 1441 aaPredicted RBP20.25■□□□□ 0.83
NME6-202ENST00000415053 SUPT5HO00267 1087 aaKnown RBP20.19■□□□□ 0.82
NME6-202ENST00000415053 SMARCA2P51531 1590 aa20.12■□□□□ 0.81
NME6-202ENST00000415053 PEG3Q9GZU2 1588 aa20.11■□□□□ 0.81
NME6-202ENST00000415053 WIZO95785 1651 aa20.07■□□□□ 0.8
NME6-202ENST00000415053 ATAD2BQ9ULI0 1458 aa20.05■□□□□ 0.8
NME6-202ENST00000415053 CC2D2AQ9P2K1 1620 aa20.02■□□□□ 0.79
NME6-202ENST00000415053 NCAPD3P42695 1498 aa19.98■□□□□ 0.79
NME6-202ENST00000415053 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
NME6-202ENST00000415053 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
NME6-202ENST00000415053 HMGXB3Q12766 1538 aa19.95■□□□□ 0.78
NME6-202ENST00000415053 CCDC88BA6NC98 1476 aa19.67■□□□□ 0.74
NME6-202ENST00000415053 DNAJC5BQ9UF47 199 aa19.65■□□□□ 0.74
NME6-202ENST00000415053 CADPSQ9ULU8 1353 aa19.44■□□□□ 0.7
NME6-202ENST00000415053 CFTRP13569 1480 aa19.42■□□□□ 0.7
NME6-202ENST00000415053 LAMC3Q9Y6N6 1575 aa19.39■□□□□ 0.69
NME6-202ENST00000415053 PRDM2Q13029 1718 aa19.3■□□□□ 0.68
NME6-202ENST00000415053 PDS5BQ9NTI5 1447 aa19.27■□□□□ 0.68
NME6-202ENST00000415053 NESP48681 1621 aa19.25■□□□□ 0.67
NME6-202ENST00000415053 FANCD2Q9BXW9 1451 aa19.21■□□□□ 0.67
NME6-202ENST00000415053 CEP164Q9UPV0 1460 aa19.16■□□□□ 0.66
NME6-202ENST00000415053 CHIC1Q5VXU3 224 aa19.15■□□□□ 0.66
NME6-202ENST00000415053 WRNQ14191 1432 aaPredicted RBP eCLIP19.14■□□□□ 0.65
NME6-202ENST00000415053 ABCC8Q09428 1581 aa19.1■□□□□ 0.65
NME6-202ENST00000415053 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
NME6-202ENST00000415053 ERCC6Q03468 1493 aa19.09■□□□□ 0.65
NME6-202ENST00000415053 KIF21AQ7Z4S6 1674 aa19.05■□□□□ 0.64
NME6-202ENST00000415053 TOP2BQ02880 1626 aa19■□□□□ 0.63
NME6-202ENST00000415053 MRC2Q9UBG0 1479 aa19■□□□□ 0.63
NME6-202ENST00000415053 DNMBPQ6XZF7 1577 aa18.99■□□□□ 0.63
NME6-202ENST00000415053 BIVM-ERCC5R4GMW8 1640 aa18.99■□□□□ 0.63
NME6-202ENST00000415053 SYNJ1O43426 1573 aa18.98■□□□□ 0.63
NME6-202ENST00000415053 CUX1P39880 1505 aa18.98■□□□□ 0.63
NME6-202ENST00000415053 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
NME6-202ENST00000415053 URB2Q14146 1524 aaKnown RBP18.93■□□□□ 0.62
NME6-202ENST00000415053 WDR62O43379 1518 aa18.9■□□□□ 0.62
NME6-202ENST00000415053 FGD5Q6ZNL6 1462 aa18.87■□□□□ 0.61
NME6-202ENST00000415053 THOC2Q8NI27 1593 aaKnown RBP18.87■□□□□ 0.61
NME6-202ENST00000415053 POLA1P09884 1462 aaPredicted RBP18.82■□□□□ 0.6
NME6-202ENST00000415053 EEA1Q15075 1411 aa18.79■□□□□ 0.6
NME6-202ENST00000415053 SOGA1O94964 1423 aa18.78■□□□□ 0.6
NME6-202ENST00000415053 IFT140Q96RY7 1462 aa18.74■□□□□ 0.59
NME6-202ENST00000415053 KIF27Q86VH2 1401 aa18.73■□□□□ 0.59
NME6-202ENST00000415053 ABCA10Q8WWZ4 1543 aa18.72■□□□□ 0.59
NME6-202ENST00000415053 CUX2O14529 1486 aa18.7■□□□□ 0.58
NME6-202ENST00000415053 RAD54L2Q9Y4B4 1467 aa18.7■□□□□ 0.58
NME6-202ENST00000415053 WDR97A6NE52 1622 aa18.66■□□□□ 0.58
NME6-202ENST00000415053 TARBP1Q13395 1621 aaKnown RBP18.65■□□□□ 0.58
NME6-202ENST00000415053 FAM9AQ8IZU1 332 aaPredicted RBP18.63■□□□□ 0.57
NME6-202ENST00000415053 CSRNP3Q8WYN3 585 aa18.6■□□□□ 0.57
NME6-202ENST00000415053 RUSC2Q8N2Y8 1516 aa18.58■□□□□ 0.56
NME6-202ENST00000415053 GAPVD1Q14C86 1478 aa18.58■□□□□ 0.56
NME6-202ENST00000415053 ABCA5Q8WWZ7 1642 aa18.57■□□□□ 0.56
NME6-202ENST00000415053 TDRD9Q8NDG6 1382 aaKnown RBP18.56■□□□□ 0.56
NME6-202ENST00000415053 ERICH3Q5RHP9 1530 aa18.54■□□□□ 0.56
NME6-202ENST00000415053 GRIN2BQ13224 1484 aa18.52■□□□□ 0.55
NME6-202ENST00000415053 EIF4G3O43432 1585 aaKnown RBP18.51■□□□□ 0.55
NME6-202ENST00000415053 ZNF608Q9ULD9 1512 aaPredicted RBP18.5■□□□□ 0.55
NME6-202ENST00000415053 IGF1RP08069 1367 aa18.5■□□□□ 0.55
NME6-202ENST00000415053 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.552e-6■■■□□ 18.3
NME6-202ENST00000415053 CUL7Q14999 1698 aa18.48■□□□□ 0.55
NME6-202ENST00000415053 KIF21BO75037 1637 aa18.47■□□□□ 0.55
NME6-202ENST00000415053 PBRM1Q86U86 1689 aa18.47■□□□□ 0.55
NME6-202ENST00000415053 GOLGA3Q08378 1498 aa18.45■□□□□ 0.54
NME6-202ENST00000415053 PRXQ9BXM0 1461 aa18.45■□□□□ 0.54
NME6-202ENST00000415053 CARMIL1Q5VZK9 1371 aa18.44■□□□□ 0.54
NME6-202ENST00000415053 RAPGEF2Q9Y4G8 1499 aa18.42■□□□□ 0.54
NME6-202ENST00000415053 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
NME6-202ENST00000415053 FHAD1B1AJZ9 1412 aa18.4■□□□□ 0.54
NME6-202ENST00000415053 SNAPC4Q5SXM2 1469 aa18.39■□□□□ 0.53
NME6-202ENST00000415053 ADAMTS12P58397 1594 aa18.38■□□□□ 0.53
NME6-202ENST00000415053 UBTFP17480 764 aaKnown RBP18.35■□□□□ 0.53
NME6-202ENST00000415053 LOC105371045A0A1W2PR82 267 aa18.32■□□□□ 0.52
NME6-202ENST00000415053 EHMT2Q96KQ7 1210 aa18.32■□□□□ 0.52
NME6-202ENST00000415053 SYNJ2O15056 1496 aa18.32■□□□□ 0.52
NME6-202ENST00000415053 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
NME6-202ENST00000415053 CHMP7Q8WUX9 453 aaPredicted RBP18.29■□□□□ 0.52
NME6-202ENST00000415053 GRIN2AQ12879 1464 aa18.26■□□□□ 0.51
NME6-202ENST00000415053 FBLN2P98095 1184 aa18.23■□□□□ 0.51
NME6-202ENST00000415053 CTTNBP2Q8WZ74 1663 aa18.17■□□□□ 0.5
NME6-202ENST00000415053 CEP162Q5TB80 1403 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms