RNA–Protein interactions for RNA: ENST00000415022.1

CRAMP1-203, Transcript of cramped chromatin regulator homolog 1, humanhuman

TSL 3

Gene CRAMP1, Length 550 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1-203ENST00000415022 NISCHQ9Y2I1 1504 aa25.79■■□□□ 1.72
CRAMP1-203ENST00000415022 CCDC180Q9P1Z9 1646 aa22.86■■□□□ 1.25
CRAMP1-203ENST00000415022 ABCC9O60706 1549 aa22.36■■□□□ 1.17
CRAMP1-203ENST00000415022 DNAJC5BQ9UF47 199 aa21.95■■□□□ 1.1
CRAMP1-203ENST00000415022 ZCCHC6Q5VYS8 1495 aaKnown RBP21.52■■□□□ 1.04
CRAMP1-203ENST00000415022 NACADO15069 1562 aa21.4■■□□□ 1.02
CRAMP1-203ENST00000415022 RB1CC1Q8TDY2 1594 aa21.39■■□□□ 1.01
CRAMP1-203ENST00000415022 DCAF8L2P0C7V8 631 aa21.34■■□□□ 1.01
CRAMP1-203ENST00000415022 MYO15BQ96JP2 1530 aa21.31■■□□□ 1
CRAMP1-203ENST00000415022 DCAF1Q9Y4B6 1507 aa21.29■■□□□ 1
CRAMP1-203ENST00000415022 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
CRAMP1-203ENST00000415022 BICRAQ9NZM4 1560 aa20.95■□□□□ 0.94
CRAMP1-203ENST00000415022 SCRIBQ14160 1630 aa20.92■□□□□ 0.94
CRAMP1-203ENST00000415022 DNAJC5Q9H3Z4 198 aa20.83■□□□□ 0.93
CRAMP1-203ENST00000415022 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
CRAMP1-203ENST00000415022 SHROOM4Q9ULL8 1493 aa20.46■□□□□ 0.87
CRAMP1-203ENST00000415022 EIF4G1Q04637 1599 aaKnown RBP20.27■□□□□ 0.84
CRAMP1-203ENST00000415022 CECR2Q9BXF3 1484 aa20.25■□□□□ 0.83
CRAMP1-203ENST00000415022 CC2D2AQ9P2K1 1620 aa20.18■□□□□ 0.82
CRAMP1-203ENST00000415022 SMARCA4P51532 1647 aa20.02■□□□□ 0.79
CRAMP1-203ENST00000415022 MROH2BQ7Z745 1585 aa19.95■□□□□ 0.78
CRAMP1-203ENST00000415022 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
CRAMP1-203ENST00000415022 ATAD2BQ9ULI0 1458 aa19.84■□□□□ 0.77
CRAMP1-203ENST00000415022 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
CRAMP1-203ENST00000415022 NCAPD3P42695 1498 aa19.78■□□□□ 0.76
CRAMP1-203ENST00000415022 WIZO95785 1651 aa19.77■□□□□ 0.76
CRAMP1-203ENST00000415022 SMARCA2P51531 1590 aa19.74■□□□□ 0.75
CRAMP1-203ENST00000415022 RSF1Q96T23 1441 aaPredicted RBP19.71■□□□□ 0.75
CRAMP1-203ENST00000415022 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
CRAMP1-203ENST00000415022 CUX2O14529 1486 aa19.67■□□□□ 0.74
CRAMP1-203ENST00000415022 BAZ1BQ9UIG0 1483 aaKnown RBP19.61■□□□□ 0.73
CRAMP1-203ENST00000415022 TOP2AP11388 1531 aaKnown RBP19.46■□□□□ 0.71
CRAMP1-203ENST00000415022 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
CRAMP1-203ENST00000415022 NESP48681 1621 aa19.4■□□□□ 0.7
CRAMP1-203ENST00000415022 ERCC6Q03468 1493 aa19.35■□□□□ 0.69
CRAMP1-203ENST00000415022 CCDC88BA6NC98 1476 aa19.26■□□□□ 0.67
CRAMP1-203ENST00000415022 LAMC3Q9Y6N6 1575 aa19.21■□□□□ 0.67
CRAMP1-203ENST00000415022 SUPT5HO00267 1087 aaKnown RBP19.2■□□□□ 0.66
CRAMP1-203ENST00000415022 KIF21AQ7Z4S6 1674 aa19.18■□□□□ 0.66
CRAMP1-203ENST00000415022 CADPSQ9ULU8 1353 aa19.18■□□□□ 0.66
CRAMP1-203ENST00000415022 CFTRP13569 1480 aa19.14■□□□□ 0.65
CRAMP1-203ENST00000415022 PRDM2Q13029 1718 aa19.08■□□□□ 0.65
CRAMP1-203ENST00000415022 THOC2Q8NI27 1593 aaKnown RBP19.06■□□□□ 0.64
CRAMP1-203ENST00000415022 PDS5BQ9NTI5 1447 aa18.99■□□□□ 0.63
CRAMP1-203ENST00000415022 FANCD2Q9BXW9 1451 aa18.98■□□□□ 0.63
CRAMP1-203ENST00000415022 CEP164Q9UPV0 1460 aa18.9■□□□□ 0.62
CRAMP1-203ENST00000415022 MRC2Q9UBG0 1479 aa18.88■□□□□ 0.61
CRAMP1-203ENST00000415022 URB2Q14146 1524 aaKnown RBP18.88■□□□□ 0.61
CRAMP1-203ENST00000415022 WDR62O43379 1518 aa18.87■□□□□ 0.61
CRAMP1-203ENST00000415022 TOPBP1Q92547 1522 aa18.73■□□□□ 0.59
CRAMP1-203ENST00000415022 DNMBPQ6XZF7 1577 aa18.7■□□□□ 0.58
CRAMP1-203ENST00000415022 CUX1P39880 1505 aa18.69■□□□□ 0.58
CRAMP1-203ENST00000415022 OSCARQ8IYS5 282 aa18.69■□□□□ 0.58
CRAMP1-203ENST00000415022 ABCC8Q09428 1581 aa18.65■□□□□ 0.58
CRAMP1-203ENST00000415022 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
CRAMP1-203ENST00000415022 SYNJ1O43426 1573 aa18.59■□□□□ 0.57
CRAMP1-203ENST00000415022 POLA1P09884 1462 aaPredicted RBP18.58■□□□□ 0.57
CRAMP1-203ENST00000415022 ZNF608Q9ULD9 1512 aaPredicted RBP18.55■□□□□ 0.56
CRAMP1-203ENST00000415022 FGD5Q6ZNL6 1462 aa18.55■□□□□ 0.56
CRAMP1-203ENST00000415022 BIVM-ERCC5R4GMW8 1640 aa18.55■□□□□ 0.56
CRAMP1-203ENST00000415022 RAD54L2Q9Y4B4 1467 aa18.54■□□□□ 0.56
CRAMP1-203ENST00000415022 AEBP2Q6ZN18 517 aaPredicted RBP18.53■□□□□ 0.56
CRAMP1-203ENST00000415022 TOP2BQ02880 1626 aa18.52■□□□□ 0.55
CRAMP1-203ENST00000415022 WDR97A6NE52 1622 aa18.51■□□□□ 0.55
CRAMP1-203ENST00000415022 WRNQ14191 1432 aaPredicted RBP eCLIP18.49■□□□□ 0.55
CRAMP1-203ENST00000415022 IFT140Q96RY7 1462 aa18.49■□□□□ 0.55
CRAMP1-203ENST00000415022 EIF4G3O43432 1585 aaKnown RBP18.45■□□□□ 0.54
CRAMP1-203ENST00000415022 SOGA1O94964 1423 aa18.43■□□□□ 0.54
CRAMP1-203ENST00000415022 RIMBP3CA6NJZ7 1639 aa18.43■□□□□ 0.54
CRAMP1-203ENST00000415022 RIMBP3BA6NNM3 1639 aa18.43■□□□□ 0.54
CRAMP1-203ENST00000415022 RIMBP3Q9UFD9 1639 aa18.43■□□□□ 0.54
CRAMP1-203ENST00000415022 AQRO60306 1485 aaKnown RBP eCLIP18.41■□□□□ 0.546e-9■■■■□ 21.5
CRAMP1-203ENST00000415022 TRHP20396 242 aaPredicted RBP18.37■□□□□ 0.53
CRAMP1-203ENST00000415022 TDRD9Q8NDG6 1382 aaKnown RBP18.37■□□□□ 0.53
CRAMP1-203ENST00000415022 ABCA10Q8WWZ4 1543 aa18.35■□□□□ 0.53
CRAMP1-203ENST00000415022 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
CRAMP1-203ENST00000415022 CYB5RLQ6IPT4 315 aa18.31■□□□□ 0.52
CRAMP1-203ENST00000415022 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
CRAMP1-203ENST00000415022 ARHGEF11O15085 1522 aa18.3■□□□□ 0.52
CRAMP1-203ENST00000415022 CHD1O14646 1710 aa18.25■□□□□ 0.51
CRAMP1-203ENST00000415022 GAPVD1Q14C86 1478 aa18.24■□□□□ 0.51
CRAMP1-203ENST00000415022 SNAPC4Q5SXM2 1469 aa18.21■□□□□ 0.51
CRAMP1-203ENST00000415022 GRIN2BQ13224 1484 aa18.19■□□□□ 0.5
CRAMP1-203ENST00000415022 RUSC2Q8N2Y8 1516 aa18.16■□□□□ 0.5
CRAMP1-203ENST00000415022 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
CRAMP1-203ENST00000415022 MAGI1Q96QZ7 1491 aaPredicted RBP18.13■□□□□ 0.49
CRAMP1-203ENST00000415022 ERICH3Q5RHP9 1530 aa18.1■□□□□ 0.49
CRAMP1-203ENST00000415022 SYNJ2O15056 1496 aa18.07■□□□□ 0.48
CRAMP1-203ENST00000415022 CHIC1Q5VXU3 224 aa18.07■□□□□ 0.48
CRAMP1-203ENST00000415022 ARAP1Q96P48 1450 aa18.07■□□□□ 0.48
CRAMP1-203ENST00000415022 IGF1RP08069 1367 aa18.06■□□□□ 0.48
CRAMP1-203ENST00000415022 KIF27Q86VH2 1401 aa18.04■□□□□ 0.48
CRAMP1-203ENST00000415022 CLASP1Q7Z460 1538 aa18.02■□□□□ 0.47
CRAMP1-203ENST00000415022 FBLN2P98095 1184 aa18.01■□□□□ 0.47
CRAMP1-203ENST00000415022 GRIN2AQ12879 1464 aa18.01■□□□□ 0.47
CRAMP1-203ENST00000415022 CEP170Q5SW79 1584 aa18■□□□□ 0.47
CRAMP1-203ENST00000415022 FHAD1B1AJZ9 1412 aa18■□□□□ 0.47
CRAMP1-203ENST00000415022 CUL7Q14999 1698 aa17.97■□□□□ 0.47
CRAMP1-203ENST00000415022 CHMP7Q8WUX9 453 aaPredicted RBP17.96■□□□□ 0.47
CRAMP1-203ENST00000415022 NUP160Q12769 1436 aa17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 313.4 ms