RNA–Protein interactions for RNA: ENST00000414790.5

H19-204, H19, imprinted maternally expressed transcript, humanhuman

TSL 1 (best)

Gene H19, Length 2,361 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H19-204ENST00000414790 NISCHQ9Y2I1 1504 aa44.86■■■■■ 4.77
H19-204ENST00000414790 CCDC180Q9P1Z9 1646 aa38.74■■■■□ 3.79
H19-204ENST00000414790 ZCCHC6Q5VYS8 1495 aaKnown RBP37.73■■■■□ 3.63
H19-204ENST00000414790 DCAF8L2P0C7V8 631 aa37.36■■■■□ 3.57
H19-204ENST00000414790 SHROOM4Q9ULL8 1493 aa37.3■■■■□ 3.56
H19-204ENST00000414790 DCAF1Q9Y4B6 1507 aa36.87■■■■□ 3.49
H19-204ENST00000414790 ABCC9O60706 1549 aa36.71■■■■□ 3.47
H19-204ENST00000414790 MYO15BQ96JP2 1530 aa36.23■■■■□ 3.39
H19-204ENST00000414790 SUPT5HO00267 1087 aaKnown RBP36.04■■■■□ 3.36
H19-204ENST00000414790 NACADO15069 1562 aa36.04■■■■□ 3.36
H19-204ENST00000414790 SCRIBQ14160 1630 aa36.03■■■■□ 3.36
H19-204ENST00000414790 RB1CC1Q8TDY2 1594 aa35.69■■■■□ 3.3
H19-204ENST00000414790 UNC13AQ9UPW8 1703 aa35.14■■■■□ 3.22
H19-204ENST00000414790 RSF1Q96T23 1441 aaPredicted RBP35.04■■■■□ 3.2
H19-204ENST00000414790 CECR2Q9BXF3 1484 aa35.02■■■■□ 3.2
H19-204ENST00000414790 PABPN1Q86U42 306 aaKnown RBP eCLIP34.83■■■■□ 3.17
H19-204ENST00000414790 MROH2BQ7Z745 1585 aa34.8■■■■□ 3.16
H19-204ENST00000414790 BICRAQ9NZM4 1560 aa34.74■■■■□ 3.15
H19-204ENST00000414790 WIZO95785 1651 aa34.56■■■■□ 3.12
H19-204ENST00000414790 CHIC1Q5VXU3 224 aa34.56■■■■□ 3.12
H19-204ENST00000414790 BAZ1AQ9NRL2 1556 aaPredicted RBP34.55■■■■□ 3.12
H19-204ENST00000414790 SMARCA4P51532 1647 aa34.4■■■■□ 3.1
H19-204ENST00000414790 TOP2AP11388 1531 aaKnown RBP34.03■■■■□ 3.04
H19-204ENST00000414790 PEG3Q9GZU2 1588 aa33.83■■■■□ 3.01
H19-204ENST00000414790 CCDC88BA6NC98 1476 aa33.82■■■■□ 3.01
H19-204ENST00000414790 SMARCA2P51531 1590 aa33.8■■■■□ 3
H19-204ENST00000414790 ATAD2BQ9ULI0 1458 aa33.77■■■■□ 3
H19-204ENST00000414790 TRIM41Q8WV44 630 aa33.69■■■□□ 2.98
H19-204ENST00000414790 EIF4G1Q04637 1599 aaKnown RBP33.64■■■□□ 2.98
H19-204ENST00000414790 BAZ1BQ9UIG0 1483 aaKnown RBP33.61■■■□□ 2.97
H19-204ENST00000414790 LOC105371045A0A1W2PR82 267 aa33.46■■■□□ 2.95
H19-204ENST00000414790 ABCC8Q09428 1581 aa33.35■■■□□ 2.93
H19-204ENST00000414790 FAM9AQ8IZU1 332 aaPredicted RBP33.33■■■□□ 2.93
H19-204ENST00000414790 NCAPD3P42695 1498 aa33.33■■■□□ 2.93
H19-204ENST00000414790 HMGXB3Q12766 1538 aa33.25■■■□□ 2.91
H19-204ENST00000414790 CC2D2AQ9P2K1 1620 aa33.1■■■□□ 2.89
H19-204ENST00000414790 EHMT2Q96KQ7 1210 aa33.04■■■□□ 2.88
H19-204ENST00000414790 WRNQ14191 1432 aaPredicted RBP eCLIP32.94■■■□□ 2.86
H19-204ENST00000414790 SYNJ1O43426 1573 aa32.84■■■□□ 2.85
H19-204ENST00000414790 SOGA1O94964 1423 aa32.81■■■□□ 2.84
H19-204ENST00000414790 CFTRP13569 1480 aa32.73■■■□□ 2.83
H19-204ENST00000414790 RUSC2Q8N2Y8 1516 aa32.72■■■□□ 2.83
H19-204ENST00000414790 CADPSQ9ULU8 1353 aa32.58■■■□□ 2.81
H19-204ENST00000414790 TOP2BQ02880 1626 aa32.55■■■□□ 2.8
H19-204ENST00000414790 CSRNP3Q8WYN3 585 aa32.52■■■□□ 2.8
H19-204ENST00000414790 DNAJC5BQ9UF47 199 aa32.51■■■□□ 2.8
H19-204ENST00000414790 PRDM2Q13029 1718 aa32.49■■■□□ 2.79
H19-204ENST00000414790 CUX1P39880 1505 aa32.48■■■□□ 2.79
H19-204ENST00000414790 BIVM-ERCC5R4GMW8 1640 aa32.48■■■□□ 2.79
H19-204ENST00000414790 EEA1Q15075 1411 aa32.48■■■□□ 2.79
H19-204ENST00000414790 NESP48681 1621 aa32.37■■■□□ 2.77
H19-204ENST00000414790 PCGF6Q9BYE7 350 aa32.35■■■□□ 2.77
H19-204ENST00000414790 FANCD2Q9BXW9 1451 aa32.26■■■□□ 2.75
H19-204ENST00000414790 UBTFP17480 764 aaKnown RBP32.25■■■□□ 2.75
H19-204ENST00000414790 GOLGA3Q08378 1498 aa32.19■■■□□ 2.74
H19-204ENST00000414790 TNIKQ9UKE5 1360 aa32.17■■■□□ 2.74
H19-204ENST00000414790 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.73
H19-204ENST00000414790 CEP162Q5TB80 1403 aa32.12■■■□□ 2.73
H19-204ENST00000414790 KIF21BO75037 1637 aa32.12■■■□□ 2.73
H19-204ENST00000414790 LAMC3Q9Y6N6 1575 aa32.1■■■□□ 2.73
H19-204ENST00000414790 RAPGEF2Q9Y4G8 1499 aa32.07■■■□□ 2.72
H19-204ENST00000414790 FGD5Q6ZNL6 1462 aa32.06■■■□□ 2.72
H19-204ENST00000414790 KIF27Q86VH2 1401 aa32.02■■■□□ 2.72
H19-204ENST00000414790 HRCP23327 699 aa32.02■■■□□ 2.72
H19-204ENST00000414790 PPARGC1BQ86YN6 1023 aaKnown RBP32■■■□□ 2.71
H19-204ENST00000414790 TRIM26Q12899 539 aaPredicted RBP31.97■■■□□ 2.71
H19-204ENST00000414790 CUX2O14529 1486 aa31.95■■■□□ 2.71
H19-204ENST00000414790 DNMBPQ6XZF7 1577 aa31.95■■■□□ 2.7
H19-204ENST00000414790 TOPBP1Q92547 1522 aa31.94■■■□□ 2.7
H19-204ENST00000414790 PRXQ9BXM0 1461 aa31.91■■■□□ 2.7
H19-204ENST00000414790 PDS5BQ9NTI5 1447 aa31.89■■■□□ 2.7
H19-204ENST00000414790 RANGAP1P46060 587 aaPredicted RBP31.87■■■□□ 2.69
H19-204ENST00000414790 URB2Q14146 1524 aaKnown RBP31.87■■■□□ 2.69
H19-204ENST00000414790 RAD54L2Q9Y4B4 1467 aa31.87■■■□□ 2.69
H19-204ENST00000414790 KIF21AQ7Z4S6 1674 aa31.87■■■□□ 2.69
H19-204ENST00000414790 POLA1P09884 1462 aaPredicted RBP31.84■■■□□ 2.69
H19-204ENST00000414790 ERICH3Q5RHP9 1530 aa31.8■■■□□ 2.68
H19-204ENST00000414790 IGF1RP08069 1367 aa31.78■■■□□ 2.68
H19-204ENST00000414790 CLIP1P30622 1438 aa31.77■■■□□ 2.68
H19-204ENST00000414790 ABCA10Q8WWZ4 1543 aa31.68■■■□□ 2.66
H19-204ENST00000414790 TTBK1Q5TCY1 1321 aaPredicted RBP31.68■■■□□ 2.66
H19-204ENST00000414790 CARMIL1Q5VZK9 1371 aa31.63■■■□□ 2.65
H19-204ENST00000414790 TDRD9Q8NDG6 1382 aaKnown RBP31.54■■■□□ 2.64
H19-204ENST00000414790 WDR97A6NE52 1622 aa31.53■■■□□ 2.64
H19-204ENST00000414790 VPS8Q8N3P4 1428 aa31.49■■■□□ 2.63
H19-204ENST00000414790 MRC2Q9UBG0 1479 aa31.48■■■□□ 2.63
H19-204ENST00000414790 ARAP1Q96P48 1450 aa31.42■■■□□ 2.62
H19-204ENST00000414790 TARBP1Q13395 1621 aaKnown RBP31.41■■■□□ 2.62
H19-204ENST00000414790 ABCA5Q8WWZ7 1642 aa31.4■■■□□ 2.62
H19-204ENST00000414790 GAPVD1Q14C86 1478 aa31.38■■■□□ 2.61
H19-204ENST00000414790 ERCC6Q03468 1493 aa31.34■■■□□ 2.61
H19-204ENST00000414790 ARHGAP35Q9NRY4 1499 aa31.34■■■□□ 2.61
H19-204ENST00000414790 CUL7Q14999 1698 aa31.33■■■□□ 2.61
H19-204ENST00000414790 WDR62O43379 1518 aa31.27■■■□□ 2.6
H19-204ENST00000414790 APLP2Q06481 763 aa31.26■■■□□ 2.59
H19-204ENST00000414790 AQRO60306 1485 aaKnown RBP eCLIP31.26■■■□□ 2.59
H19-204ENST00000414790 P3H3Q8IVL6 736 aa31.17■■■□□ 2.58
H19-204ENST00000414790 ZNF608Q9ULD9 1512 aaPredicted RBP31.17■■■□□ 2.58
H19-204ENST00000414790 PBRM1Q86U86 1689 aa31.15■■■□□ 2.58
H19-204ENST00000414790 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms