RNA–Protein interactions for RNA: ENST00000414785.5

PLOD3-202, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

TSL 5

Gene PLOD3, Length 539 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-202ENST00000414785 NISCHQ9Y2I1 1504 aa42.45■■■■■ 4.39
PLOD3-202ENST00000414785 ABCC9O60706 1549 aa38.73■■■■□ 3.79
PLOD3-202ENST00000414785 CCDC180Q9P1Z9 1646 aa38.17■■■■□ 3.7
PLOD3-202ENST00000414785 DNAJC5BQ9UF47 199 aa36.79■■■■□ 3.48
PLOD3-202ENST00000414785 RB1CC1Q8TDY2 1594 aa36.56■■■■□ 3.44
PLOD3-202ENST00000414785 NACADO15069 1562 aa36.21■■■■□ 3.39
PLOD3-202ENST00000414785 DCAF8L2P0C7V8 631 aa36.04■■■■□ 3.36
PLOD3-202ENST00000414785 PABPN1Q86U42 306 aaKnown RBP eCLIP36.03■■■■□ 3.36
PLOD3-202ENST00000414785 UNC13AQ9UPW8 1703 aa35.77■■■■□ 3.32
PLOD3-202ENST00000414785 BICRAQ9NZM4 1560 aa35.62■■■■□ 3.29
PLOD3-202ENST00000414785 MYO15BQ96JP2 1530 aa35.55■■■■□ 3.28
PLOD3-202ENST00000414785 ZCCHC6Q5VYS8 1495 aaKnown RBP35.1■■■■□ 3.21
PLOD3-202ENST00000414785 DCAF1Q9Y4B6 1507 aa34.96■■■■□ 3.19
PLOD3-202ENST00000414785 SHROOM4Q9ULL8 1493 aa34.93■■■■□ 3.18
PLOD3-202ENST00000414785 CC2D2AQ9P2K1 1620 aa34.92■■■■□ 3.18
PLOD3-202ENST00000414785 CECR2Q9BXF3 1484 aa34.89■■■■□ 3.18
PLOD3-202ENST00000414785 SCRIBQ14160 1630 aa34.88■■■■□ 3.17
PLOD3-202ENST00000414785 EIF4G1Q04637 1599 aaKnown RBP34.74■■■■□ 3.15
PLOD3-202ENST00000414785 DNAJC5Q9H3Z4 198 aa33.96■■■■□ 3.03
PLOD3-202ENST00000414785 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
PLOD3-202ENST00000414785 CUX2O14529 1486 aa33.44■■■□□ 2.94
PLOD3-202ENST00000414785 ERCC6Q03468 1493 aa33.39■■■□□ 2.94
PLOD3-202ENST00000414785 ATAD2BQ9ULI0 1458 aa33.36■■■□□ 2.93
PLOD3-202ENST00000414785 SMARCA4P51532 1647 aa33.19■■■□□ 2.9
PLOD3-202ENST00000414785 NESP48681 1621 aa33.18■■■□□ 2.9
PLOD3-202ENST00000414785 HMGXB3Q12766 1538 aa33.17■■■□□ 2.9
PLOD3-202ENST00000414785 SMARCA2P51531 1590 aa33.16■■■□□ 2.9
PLOD3-202ENST00000414785 BAZ1BQ9UIG0 1483 aaKnown RBP32.98■■■□□ 2.87
PLOD3-202ENST00000414785 BAZ1AQ9NRL2 1556 aaPredicted RBP32.92■■■□□ 2.86
PLOD3-202ENST00000414785 THOC2Q8NI27 1593 aaKnown RBP32.86■■■□□ 2.85
PLOD3-202ENST00000414785 PEG3Q9GZU2 1588 aa32.84■■■□□ 2.85
PLOD3-202ENST00000414785 MROH2BQ7Z745 1585 aa32.76■■■□□ 2.84
PLOD3-202ENST00000414785 LAMC3Q9Y6N6 1575 aa32.75■■■□□ 2.83
PLOD3-202ENST00000414785 KIF21AQ7Z4S6 1674 aa32.66■■■□□ 2.82
PLOD3-202ENST00000414785 PDS5BQ9NTI5 1447 aa32.58■■■□□ 2.81
PLOD3-202ENST00000414785 CADPSQ9ULU8 1353 aa32.45■■■□□ 2.78
PLOD3-202ENST00000414785 MRC2Q9UBG0 1479 aa32.36■■■□□ 2.77
PLOD3-202ENST00000414785 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
PLOD3-202ENST00000414785 WIZO95785 1651 aa32.33■■■□□ 2.77
PLOD3-202ENST00000414785 WDR62O43379 1518 aa32.3■■■□□ 2.76
PLOD3-202ENST00000414785 CEP164Q9UPV0 1460 aa32.15■■■□□ 2.74
PLOD3-202ENST00000414785 FANCD2Q9BXW9 1451 aa32.1■■■□□ 2.73
PLOD3-202ENST00000414785 CFTRP13569 1480 aa32■■■□□ 2.71
PLOD3-202ENST00000414785 RSF1Q96T23 1441 aaPredicted RBP31.92■■■□□ 2.7
PLOD3-202ENST00000414785 URB2Q14146 1524 aaKnown RBP31.9■■■□□ 2.7
PLOD3-202ENST00000414785 OSCARQ8IYS5 282 aa31.86■■■□□ 2.69
PLOD3-202ENST00000414785 TOP2AP11388 1531 aaKnown RBP31.85■■■□□ 2.69
PLOD3-202ENST00000414785 ZNF608Q9ULD9 1512 aaPredicted RBP31.6■■■□□ 2.65
PLOD3-202ENST00000414785 PRDM2Q13029 1718 aa31.54■■■□□ 2.64
PLOD3-202ENST00000414785 RIMBP3CA6NJZ7 1639 aa31.53■■■□□ 2.64
PLOD3-202ENST00000414785 RIMBP3BA6NNM3 1639 aa31.53■■■□□ 2.64
PLOD3-202ENST00000414785 RIMBP3Q9UFD9 1639 aa31.53■■■□□ 2.64
PLOD3-202ENST00000414785 CCDC88BA6NC98 1476 aa31.53■■■□□ 2.64
PLOD3-202ENST00000414785 IFT140Q96RY7 1462 aa31.5■■■□□ 2.63
PLOD3-202ENST00000414785 TOPBP1Q92547 1522 aa31.45■■■□□ 2.63
PLOD3-202ENST00000414785 ARHGEF11O15085 1522 aa31.4■■■□□ 2.62
PLOD3-202ENST00000414785 EIF4G3O43432 1585 aaKnown RBP31.34■■■□□ 2.61
PLOD3-202ENST00000414785 DNMBPQ6XZF7 1577 aa31.26■■■□□ 2.59
PLOD3-202ENST00000414785 AQRO60306 1485 aaKnown RBP eCLIP31.25■■■□□ 2.598e-6■■■■□ 23.2
PLOD3-202ENST00000414785 ABCC8Q09428 1581 aa31.24■■■□□ 2.59
PLOD3-202ENST00000414785 CYB5RLQ6IPT4 315 aa31.22■■■□□ 2.59
PLOD3-202ENST00000414785 TARBP1Q13395 1621 aaKnown RBP31.2■■■□□ 2.59
PLOD3-202ENST00000414785 CHD1O14646 1710 aa31.16■■■□□ 2.58
PLOD3-202ENST00000414785 POLA1P09884 1462 aaPredicted RBP31.12■■■□□ 2.57
PLOD3-202ENST00000414785 ARAP1Q96P48 1450 aa31.1■■■□□ 2.57
PLOD3-202ENST00000414785 FBLN2P98095 1184 aa31.09■■■□□ 2.57
PLOD3-202ENST00000414785 RAD54L2Q9Y4B4 1467 aa31.05■■■□□ 2.56
PLOD3-202ENST00000414785 TDRD9Q8NDG6 1382 aaKnown RBP30.99■■■□□ 2.55
PLOD3-202ENST00000414785 TRHP20396 242 aaPredicted RBP30.97■■■□□ 2.55
PLOD3-202ENST00000414785 SOGA1O94964 1423 aa30.94■■■□□ 2.54
PLOD3-202ENST00000414785 SNAPC4Q5SXM2 1469 aa30.89■■■□□ 2.53
PLOD3-202ENST00000414785 FGD5Q6ZNL6 1462 aa30.86■■■□□ 2.53
PLOD3-202ENST00000414785 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
PLOD3-202ENST00000414785 CUX1P39880 1505 aa30.79■■■□□ 2.52
PLOD3-202ENST00000414785 CHMP7Q8WUX9 453 aaPredicted RBP30.75■■■□□ 2.51
PLOD3-202ENST00000414785 WDR97A6NE52 1622 aa30.73■■■□□ 2.51
PLOD3-202ENST00000414785 MAGI1Q96QZ7 1491 aaPredicted RBP30.72■■■□□ 2.51
PLOD3-202ENST00000414785 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
PLOD3-202ENST00000414785 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
PLOD3-202ENST00000414785 SYNJ2O15056 1496 aa30.65■■■□□ 2.5
PLOD3-202ENST00000414785 GAPVD1Q14C86 1478 aa30.55■■■□□ 2.48
PLOD3-202ENST00000414785 PBRM1Q86U86 1689 aa30.54■■■□□ 2.48
PLOD3-202ENST00000414785 ABCA5Q8WWZ7 1642 aa30.46■■■□□ 2.47
PLOD3-202ENST00000414785 ABCA10Q8WWZ4 1543 aa30.45■■■□□ 2.47
PLOD3-202ENST00000414785 ERCC6L2Q5T890 1561 aa30.4■■■□□ 2.46
PLOD3-202ENST00000414785 GRIN2AQ12879 1464 aa30.33■■■□□ 2.45
PLOD3-202ENST00000414785 AEBP2Q6ZN18 517 aaPredicted RBP30.31■■■□□ 2.44
PLOD3-202ENST00000414785 CEP170Q5SW79 1584 aa30.28■■■□□ 2.44
PLOD3-202ENST00000414785 ADAMTS12P58397 1594 aa30.26■■■□□ 2.43
PLOD3-202ENST00000414785 NUP160Q12769 1436 aa30.25■■■□□ 2.43
PLOD3-202ENST00000414785 WRNQ14191 1432 aaPredicted RBP eCLIP30.23■■■□□ 2.43
PLOD3-202ENST00000414785 SUPT5HO00267 1087 aaKnown RBP30.22■■■□□ 2.43
PLOD3-202ENST00000414785 SHROOM2Q13796 1616 aa30.14■■■□□ 2.41
PLOD3-202ENST00000414785 FHAD1B1AJZ9 1412 aa30.13■■■□□ 2.41
PLOD3-202ENST00000414785 TOP2BQ02880 1626 aa30.12■■■□□ 2.41
PLOD3-202ENST00000414785 BIVM-ERCC5R4GMW8 1640 aa30.11■■■□□ 2.41
PLOD3-202ENST00000414785 ERICH3Q5RHP9 1530 aa30.03■■■□□ 2.4
PLOD3-202ENST00000414785 PRG4Q92954 1404 aaPredicted RBP30■■■□□ 2.39
PLOD3-202ENST00000414785 KIF13AQ9H1H9 1805 aa29.95■■■□□ 2.39
PLOD3-202ENST00000414785 JPH4Q96JJ6 628 aa29.93■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms