RNA–Protein interactions for RNA: ENST00000414331.5

PTPA-209, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 3

Gene PTPA, Length 681 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-209ENST00000414331 NISCHQ9Y2I1 1504 aa39.11■■■■□ 3.85
PTPA-209ENST00000414331 CCDC180Q9P1Z9 1646 aa35.12■■■■□ 3.21
PTPA-209ENST00000414331 ABCC9O60706 1549 aa34.79■■■■□ 3.16
PTPA-209ENST00000414331 RB1CC1Q8TDY2 1594 aa33.29■■■□□ 2.92
PTPA-209ENST00000414331 NACADO15069 1562 aa33.09■■■□□ 2.89
PTPA-209ENST00000414331 DCAF8L2P0C7V8 631 aa32.85■■■□□ 2.85
PTPA-209ENST00000414331 MYO15BQ96JP2 1530 aa32.69■■■□□ 2.82
PTPA-209ENST00000414331 UNC13AQ9UPW8 1703 aa32.55■■■□□ 2.8
PTPA-209ENST00000414331 ZCCHC6Q5VYS8 1495 aaKnown RBP32.49■■■□□ 2.79
PTPA-209ENST00000414331 PABPN1Q86U42 306 aaKnown RBP eCLIP32.35■■■□□ 2.77
PTPA-209ENST00000414331 DCAF1Q9Y4B6 1507 aa32.35■■■□□ 2.77
PTPA-209ENST00000414331 DNAJC5BQ9UF47 199 aa32.28■■■□□ 2.76
PTPA-209ENST00000414331 BICRAQ9NZM4 1560 aa32.24■■■□□ 2.75
PTPA-209ENST00000414331 SCRIBQ14160 1630 aa31.97■■■□□ 2.71
PTPA-209ENST00000414331 SHROOM4Q9ULL8 1493 aa31.92■■■□□ 2.7
PTPA-209ENST00000414331 CC2D2AQ9P2K1 1620 aa31.47■■■□□ 2.63
PTPA-209ENST00000414331 EIF4G1Q04637 1599 aaKnown RBP31.46■■■□□ 2.63
PTPA-209ENST00000414331 CECR2Q9BXF3 1484 aa31.33■■■□□ 2.61
PTPA-209ENST00000414331 SMARCA4P51532 1647 aa30.51■■■□□ 2.48
PTPA-209ENST00000414331 NCAPD3P42695 1498 aa30.47■■■□□ 2.47
PTPA-209ENST00000414331 SMARCA2P51531 1590 aa30.43■■■□□ 2.46
PTPA-209ENST00000414331 ATAD2BQ9ULI0 1458 aa30.42■■■□□ 2.46
PTPA-209ENST00000414331 BAZ1AQ9NRL2 1556 aaPredicted RBP30.4■■■□□ 2.46
PTPA-209ENST00000414331 HMGXB3Q12766 1538 aa30.35■■■□□ 2.45
PTPA-209ENST00000414331 PEG3Q9GZU2 1588 aa30.2■■■□□ 2.42
PTPA-209ENST00000414331 BAZ1BQ9UIG0 1483 aaKnown RBP30.19■■■□□ 2.42
PTPA-209ENST00000414331 MROH2BQ7Z745 1585 aa30.12■■■□□ 2.41
PTPA-209ENST00000414331 ERCC6Q03468 1493 aa30.08■■■□□ 2.41
PTPA-209ENST00000414331 CUX2O14529 1486 aa29.94■■■□□ 2.38
PTPA-209ENST00000414331 NESP48681 1621 aa29.93■■■□□ 2.38
PTPA-209ENST00000414331 LAMC3Q9Y6N6 1575 aa29.84■■■□□ 2.37
PTPA-209ENST00000414331 WIZO95785 1651 aa29.82■■■□□ 2.36
PTPA-209ENST00000414331 THOC2Q8NI27 1593 aaKnown RBP29.66■■■□□ 2.34
PTPA-209ENST00000414331 KIF21AQ7Z4S6 1674 aa29.64■■■□□ 2.34
PTPA-209ENST00000414331 PDS5BQ9NTI5 1447 aa29.62■■■□□ 2.33
PTPA-209ENST00000414331 CADPSQ9ULU8 1353 aa29.56■■■□□ 2.32
PTPA-209ENST00000414331 RSF1Q96T23 1441 aaPredicted RBP29.55■■■□□ 2.32
PTPA-209ENST00000414331 DNAJC5Q9H3Z4 198 aa29.54■■■□□ 2.32
PTPA-209ENST00000414331 TOP2AP11388 1531 aaKnown RBP29.48■■■□□ 2.31
PTPA-209ENST00000414331 MRC2Q9UBG0 1479 aa29.37■■■□□ 2.29
PTPA-209ENST00000414331 CEP164Q9UPV0 1460 aa29.31■■■□□ 2.28
PTPA-209ENST00000414331 WDR62O43379 1518 aa29.3■■■□□ 2.28
PTPA-209ENST00000414331 CFTRP13569 1480 aa29.28■■■□□ 2.28
PTPA-209ENST00000414331 FANCD2Q9BXW9 1451 aa29.26■■■□□ 2.27
PTPA-209ENST00000414331 PRDM2Q13029 1718 aa29.17■■■□□ 2.26
PTPA-209ENST00000414331 CCDC88BA6NC98 1476 aa29.07■■■□□ 2.24
PTPA-209ENST00000414331 URB2Q14146 1524 aaKnown RBP28.99■■■□□ 2.23
PTPA-209ENST00000414331 TOPBP1Q92547 1522 aa28.74■■■□□ 2.19
PTPA-209ENST00000414331 ABCC8Q09428 1581 aa28.71■■■□□ 2.19
PTPA-209ENST00000414331 IFT140Q96RY7 1462 aa28.7■■■□□ 2.18
PTPA-209ENST00000414331 DNMBPQ6XZF7 1577 aa28.69■■■□□ 2.18
PTPA-209ENST00000414331 ZNF608Q9ULD9 1512 aaPredicted RBP28.58■■■□□ 2.17
PTPA-209ENST00000414331 EIF4G3O43432 1585 aaKnown RBP28.53■■■□□ 2.16
PTPA-209ENST00000414331 OSCARQ8IYS5 282 aa28.52■■■□□ 2.16
PTPA-209ENST00000414331 TARBP1Q13395 1621 aaKnown RBP28.47■■■□□ 2.15
PTPA-209ENST00000414331 POLA1P09884 1462 aaPredicted RBP28.45■■■□□ 2.14
PTPA-209ENST00000414331 SUPT5HO00267 1087 aaKnown RBP28.39■■■□□ 2.14
PTPA-209ENST00000414331 TRIM41Q8WV44 630 aa28.39■■■□□ 2.14
PTPA-209ENST00000414331 AQRO60306 1485 aaKnown RBP eCLIP28.34■■■□□ 2.136e-7■■□□□ 11.9
PTPA-209ENST00000414331 FGD5Q6ZNL6 1462 aa28.32■■■□□ 2.12
PTPA-209ENST00000414331 CUX1P39880 1505 aa28.31■■■□□ 2.12
PTPA-209ENST00000414331 RAD54L2Q9Y4B4 1467 aa28.3■■■□□ 2.12
PTPA-209ENST00000414331 CHD1O14646 1710 aa28.29■■■□□ 2.12
PTPA-209ENST00000414331 SOGA1O94964 1423 aa28.29■■■□□ 2.12
PTPA-209ENST00000414331 WDR97A6NE52 1622 aa28.28■■■□□ 2.12
PTPA-209ENST00000414331 RIMBP3CA6NJZ7 1639 aa28.22■■■□□ 2.11
PTPA-209ENST00000414331 RIMBP3BA6NNM3 1639 aa28.22■■■□□ 2.11
PTPA-209ENST00000414331 RIMBP3Q9UFD9 1639 aa28.22■■■□□ 2.11
PTPA-209ENST00000414331 TDRD9Q8NDG6 1382 aaKnown RBP28.19■■■□□ 2.1
PTPA-209ENST00000414331 ARHGEF11O15085 1522 aa28.13■■■□□ 2.09
PTPA-209ENST00000414331 FBLN2P98095 1184 aa28.12■■■□□ 2.09
PTPA-209ENST00000414331 SNAPC4Q5SXM2 1469 aa28.12■■■□□ 2.09
PTPA-209ENST00000414331 GRIN2BQ13224 1484 aa28.07■■■□□ 2.08
PTPA-209ENST00000414331 MAGI1Q96QZ7 1491 aaPredicted RBP28.07■■■□□ 2.08
PTPA-209ENST00000414331 PBRM1Q86U86 1689 aa28.06■■■□□ 2.08
PTPA-209ENST00000414331 ABCA10Q8WWZ4 1543 aa28■■■□□ 2.07
PTPA-209ENST00000414331 GAPVD1Q14C86 1478 aa27.99■■■□□ 2.07
PTPA-209ENST00000414331 ABCA5Q8WWZ7 1642 aa27.99■■■□□ 2.07
PTPA-209ENST00000414331 BIVM-ERCC5R4GMW8 1640 aa27.98■■■□□ 2.07
PTPA-209ENST00000414331 SYNJ1O43426 1573 aa27.97■■■□□ 2.07
PTPA-209ENST00000414331 TOP2BQ02880 1626 aa27.96■■■□□ 2.07
PTPA-209ENST00000414331 SYNJ2O15056 1496 aa27.95■■■□□ 2.07
PTPA-209ENST00000414331 CHMP7Q8WUX9 453 aaPredicted RBP27.95■■■□□ 2.06
PTPA-209ENST00000414331 WRNQ14191 1432 aaPredicted RBP eCLIP27.93■■■□□ 2.06
PTPA-209ENST00000414331 CLASP1Q7Z460 1538 aa27.92■■■□□ 2.06
PTPA-209ENST00000414331 ARAP1Q96P48 1450 aa27.85■■■□□ 2.05
PTPA-209ENST00000414331 CYB5RLQ6IPT4 315 aa27.82■■■□□ 2.04
PTPA-209ENST00000414331 ADAMTS12P58397 1594 aa27.77■■■□□ 2.04
PTPA-209ENST00000414331 GRIN2AQ12879 1464 aa27.71■■■□□ 2.03
PTPA-209ENST00000414331 ERICH3Q5RHP9 1530 aa27.68■■■□□ 2.02
PTPA-209ENST00000414331 FHAD1B1AJZ9 1412 aa27.65■■■□□ 2.02
PTPA-209ENST00000414331 CEP170Q5SW79 1584 aa27.6■■■□□ 2.01
PTPA-209ENST00000414331 NUP160Q12769 1436 aa27.58■■■□□ 2.01
PTPA-209ENST00000414331 TRHP20396 242 aaPredicted RBP27.49■■□□□ 1.99
PTPA-209ENST00000414331 SHROOM2Q13796 1616 aa27.49■■□□□ 1.99
PTPA-209ENST00000414331 ERCC6L2Q5T890 1561 aa27.46■■□□□ 1.99
PTPA-209ENST00000414331 KIF27Q86VH2 1401 aa27.4■■□□□ 1.98
PTPA-209ENST00000414331 CUL7Q14999 1698 aa27.39■■□□□ 1.97
PTPA-209ENST00000414331 RUSC2Q8N2Y8 1516 aa27.38■■□□□ 1.97
PTPA-209ENST00000414331 PRG4Q92954 1404 aaPredicted RBP27.29■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms