RNA–Protein interactions for RNA: ENST00000414047.1

VGLL4-203, Transcript of vestigial like family member 4, humanhuman

TSL 3

Gene VGLL4, Length 453 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL4-203ENST00000414047 NISCHQ9Y2I1 1504 aa47.68■■■■■ 5.22
VGLL4-203ENST00000414047 CCDC180Q9P1Z9 1646 aa42.36■■■■■ 4.37
VGLL4-203ENST00000414047 ABCC9O60706 1549 aa41.74■■■■■ 4.27
VGLL4-203ENST00000414047 DCAF8L2P0C7V8 631 aa40.11■■■■■ 4.01
VGLL4-203ENST00000414047 RB1CC1Q8TDY2 1594 aa40.05■■■■■ 4
VGLL4-203ENST00000414047 NACADO15069 1562 aa39.96■■■■□ 3.99
VGLL4-203ENST00000414047 MYO15BQ96JP2 1530 aa39.65■■■■□ 3.94
VGLL4-203ENST00000414047 ZCCHC6Q5VYS8 1495 aaKnown RBP39.64■■■■□ 3.94
VGLL4-203ENST00000414047 DCAF1Q9Y4B6 1507 aa39.42■■■■□ 3.9
VGLL4-203ENST00000414047 PABPN1Q86U42 306 aaKnown RBP eCLIP39.07■■■■□ 3.85
VGLL4-203ENST00000414047 UNC13AQ9UPW8 1703 aa38.97■■■■□ 3.83
VGLL4-203ENST00000414047 BICRAQ9NZM4 1560 aa38.78■■■■□ 3.8
VGLL4-203ENST00000414047 SCRIBQ14160 1630 aa38.71■■■■□ 3.79
VGLL4-203ENST00000414047 DNAJC5BQ9UF47 199 aa38.51■■■■□ 3.76
VGLL4-203ENST00000414047 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
VGLL4-203ENST00000414047 EIF4G1Q04637 1599 aaKnown RBP37.81■■■■□ 3.64
VGLL4-203ENST00000414047 CC2D2AQ9P2K1 1620 aa37.69■■■■□ 3.62
VGLL4-203ENST00000414047 CECR2Q9BXF3 1484 aa37.54■■■■□ 3.6
VGLL4-203ENST00000414047 SMARCA4P51532 1647 aa36.99■■■■□ 3.51
VGLL4-203ENST00000414047 BAZ1AQ9NRL2 1556 aaPredicted RBP36.97■■■■□ 3.51
VGLL4-203ENST00000414047 NCAPD3P42695 1498 aa36.91■■■■□ 3.5
VGLL4-203ENST00000414047 ATAD2BQ9ULI0 1458 aa36.89■■■■□ 3.5
VGLL4-203ENST00000414047 SMARCA2P51531 1590 aa36.83■■■■□ 3.49
VGLL4-203ENST00000414047 MROH2BQ7Z745 1585 aa36.73■■■■□ 3.47
VGLL4-203ENST00000414047 HMGXB3Q12766 1538 aa36.64■■■■□ 3.46
VGLL4-203ENST00000414047 PEG3Q9GZU2 1588 aa36.61■■■■□ 3.45
VGLL4-203ENST00000414047 BAZ1BQ9UIG0 1483 aaKnown RBP36.59■■■■□ 3.45
VGLL4-203ENST00000414047 RSF1Q96T23 1441 aaPredicted RBP36.3■■■■□ 3.4
VGLL4-203ENST00000414047 WIZO95785 1651 aa36.29■■■■□ 3.4
VGLL4-203ENST00000414047 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
VGLL4-203ENST00000414047 NESP48681 1621 aa36.05■■■■□ 3.36
VGLL4-203ENST00000414047 TOP2AP11388 1531 aaKnown RBP35.93■■■■□ 3.34
VGLL4-203ENST00000414047 LAMC3Q9Y6N6 1575 aa35.92■■■■□ 3.34
VGLL4-203ENST00000414047 CADPSQ9ULU8 1353 aa35.86■■■■□ 3.33
VGLL4-203ENST00000414047 PDS5BQ9NTI5 1447 aa35.78■■■■□ 3.32
VGLL4-203ENST00000414047 CUX2O14529 1486 aa35.67■■■■□ 3.3
VGLL4-203ENST00000414047 CFTRP13569 1480 aa35.57■■■■□ 3.28
VGLL4-203ENST00000414047 CCDC88BA6NC98 1476 aa35.55■■■■□ 3.28
VGLL4-203ENST00000414047 KIF21AQ7Z4S6 1674 aa35.52■■■■□ 3.28
VGLL4-203ENST00000414047 THOC2Q8NI27 1593 aaKnown RBP35.45■■■■□ 3.27
VGLL4-203ENST00000414047 FANCD2Q9BXW9 1451 aa35.42■■■■□ 3.26
VGLL4-203ENST00000414047 CEP164Q9UPV0 1460 aa35.39■■■■□ 3.26
VGLL4-203ENST00000414047 SUPT5HO00267 1087 aaKnown RBP35.37■■■■□ 3.25
VGLL4-203ENST00000414047 MRC2Q9UBG0 1479 aa35.36■■■■□ 3.25
VGLL4-203ENST00000414047 WDR62O43379 1518 aa35.2■■■■□ 3.23
VGLL4-203ENST00000414047 PRDM2Q13029 1718 aa35.11■■■■□ 3.21
VGLL4-203ENST00000414047 URB2Q14146 1524 aaKnown RBP35.04■■■■□ 3.2
VGLL4-203ENST00000414047 DNAJC5Q9H3Z4 198 aa34.86■■■■□ 3.17
VGLL4-203ENST00000414047 ABCC8Q09428 1581 aa34.84■■■■□ 3.17
VGLL4-203ENST00000414047 TOPBP1Q92547 1522 aa34.81■■■■□ 3.16
VGLL4-203ENST00000414047 DNMBPQ6XZF7 1577 aa34.73■■■■□ 3.15
VGLL4-203ENST00000414047 IFT140Q96RY7 1462 aa34.66■■■■□ 3.14
VGLL4-203ENST00000414047 POLA1P09884 1462 aaPredicted RBP34.5■■■■□ 3.11
VGLL4-203ENST00000414047 ZNF608Q9ULD9 1512 aaPredicted RBP34.5■■■■□ 3.11
VGLL4-203ENST00000414047 CUX1P39880 1505 aa34.46■■■■□ 3.11
VGLL4-203ENST00000414047 SOGA1O94964 1423 aa34.43■■■■□ 3.1
VGLL4-203ENST00000414047 FGD5Q6ZNL6 1462 aa34.39■■■■□ 3.1
VGLL4-203ENST00000414047 TARBP1Q13395 1621 aaKnown RBP34.39■■■■□ 3.1
VGLL4-203ENST00000414047 RAD54L2Q9Y4B4 1467 aa34.38■■■■□ 3.09
VGLL4-203ENST00000414047 AQRO60306 1485 aaKnown RBP eCLIP34.32■■■■□ 3.08
VGLL4-203ENST00000414047 EIF4G3O43432 1585 aaKnown RBP34.29■■■■□ 3.08
VGLL4-203ENST00000414047 OSCARQ8IYS5 282 aa34.28■■■■□ 3.08
VGLL4-203ENST00000414047 TDRD9Q8NDG6 1382 aaKnown RBP34.26■■■■□ 3.08
VGLL4-203ENST00000414047 WRNQ14191 1432 aaPredicted RBP eCLIP34.24■■■■□ 3.07
VGLL4-203ENST00000414047 WDR97A6NE52 1622 aa34.12■■■■□ 3.05
VGLL4-203ENST00000414047 TOP2BQ02880 1626 aa34.12■■■■□ 3.05
VGLL4-203ENST00000414047 SYNJ1O43426 1573 aa34.08■■■■□ 3.05
VGLL4-203ENST00000414047 BIVM-ERCC5R4GMW8 1640 aa34.06■■■■□ 3.04
VGLL4-203ENST00000414047 FBLN2P98095 1184 aa34.06■■■■□ 3.04
VGLL4-203ENST00000414047 ABCA10Q8WWZ4 1543 aa34.05■■■■□ 3.04
VGLL4-203ENST00000414047 GRIN2BQ13224 1484 aa34.02■■■■□ 3.04
VGLL4-203ENST00000414047 GAPVD1Q14C86 1478 aa34■■■■□ 3.03
VGLL4-203ENST00000414047 SNAPC4Q5SXM2 1469 aa33.97■■■■□ 3.03
VGLL4-203ENST00000414047 CHMP7Q8WUX9 453 aaPredicted RBP33.92■■■■□ 3.02
VGLL4-203ENST00000414047 MAGI1Q96QZ7 1491 aaPredicted RBP33.92■■■■□ 3.02
VGLL4-203ENST00000414047 ABCA5Q8WWZ7 1642 aa33.86■■■■□ 3.01
VGLL4-203ENST00000414047 CHD1O14646 1710 aa33.84■■■■□ 3.01
VGLL4-203ENST00000414047 SYNJ2O15056 1496 aa33.81■■■■□ 3
VGLL4-203ENST00000414047 PBRM1Q86U86 1689 aa33.8■■■■□ 3
VGLL4-203ENST00000414047 TRIM41Q8WV44 630 aa33.68■■■□□ 2.98
VGLL4-203ENST00000414047 ERICH3Q5RHP9 1530 aa33.63■■■□□ 2.97
VGLL4-203ENST00000414047 FHAD1B1AJZ9 1412 aa33.62■■■□□ 2.97
VGLL4-203ENST00000414047 ARHGEF11O15085 1522 aa33.58■■■□□ 2.97
VGLL4-203ENST00000414047 RIMBP3CA6NJZ7 1639 aa33.58■■■□□ 2.97
VGLL4-203ENST00000414047 RIMBP3BA6NNM3 1639 aa33.58■■■□□ 2.97
VGLL4-203ENST00000414047 RIMBP3Q9UFD9 1639 aa33.58■■■□□ 2.97
VGLL4-203ENST00000414047 ADAMTS12P58397 1594 aa33.57■■■□□ 2.96
VGLL4-203ENST00000414047 KIF27Q86VH2 1401 aa33.57■■■□□ 2.96
VGLL4-203ENST00000414047 GRIN2AQ12879 1464 aa33.55■■■□□ 2.96
VGLL4-203ENST00000414047 CLASP1Q7Z460 1538 aa33.53■■■□□ 2.96
VGLL4-203ENST00000414047 IGF1RP08069 1367 aa33.46■■■□□ 2.95
VGLL4-203ENST00000414047 CYB5RLQ6IPT4 315 aa33.43■■■□□ 2.94
VGLL4-203ENST00000414047 NUP160Q12769 1436 aa33.4■■■□□ 2.94
VGLL4-203ENST00000414047 CEP170Q5SW79 1584 aa33.34■■■□□ 2.93
VGLL4-203ENST00000414047 ARAP1Q96P48 1450 aa33.31■■■□□ 2.92
VGLL4-203ENST00000414047 CUL7Q14999 1698 aa33.26■■■□□ 2.92
VGLL4-203ENST00000414047 CARMIL1Q5VZK9 1371 aa33.26■■■□□ 2.92
VGLL4-203ENST00000414047 JPH4Q96JJ6 628 aa33.17■■■□□ 2.9
VGLL4-203ENST00000414047 RUSC2Q8N2Y8 1516 aa33.15■■■□□ 2.9
VGLL4-203ENST00000414047 SHROOM2Q13796 1616 aa33.1■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms