RNA–Protein interactions for RNA: ENST00000413913.2

PTGDS-203, Transcript of prostaglandin D2 synthase, humanhuman

TSL 3

Gene PTGDS, Length 686 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTGDS-203ENST00000413913 NISCHQ9Y2I1 1504 aa52.08■■■■■ 5.93
PTGDS-203ENST00000413913 CCDC180Q9P1Z9 1646 aa46.56■■■■■ 5.04
PTGDS-203ENST00000413913 ABCC9O60706 1549 aa46■■■■■ 4.95
PTGDS-203ENST00000413913 RB1CC1Q8TDY2 1594 aa44.04■■■■■ 4.64
PTGDS-203ENST00000413913 NACADO15069 1562 aa43.85■■■■■ 4.61
PTGDS-203ENST00000413913 DCAF8L2P0C7V8 631 aa43.67■■■■■ 4.58
PTGDS-203ENST00000413913 MYO15BQ96JP2 1530 aa43.41■■■■■ 4.54
PTGDS-203ENST00000413913 ZCCHC6Q5VYS8 1495 aaKnown RBP43.28■■■■■ 4.52
PTGDS-203ENST00000413913 UNC13AQ9UPW8 1703 aa43.11■■■■■ 4.49
PTGDS-203ENST00000413913 DCAF1Q9Y4B6 1507 aa43.06■■■■■ 4.48
PTGDS-203ENST00000413913 PABPN1Q86U42 306 aaKnown RBP eCLIP42.87■■■■■ 4.45
PTGDS-203ENST00000413913 BICRAQ9NZM4 1560 aa42.74■■■■■ 4.43
PTGDS-203ENST00000413913 DNAJC5BQ9UF47 199 aa42.65■■■■■ 4.42
PTGDS-203ENST00000413913 SCRIBQ14160 1630 aa42.44■■■■■ 4.38
PTGDS-203ENST00000413913 SHROOM4Q9ULL8 1493 aa42.2■■■■■ 4.35
PTGDS-203ENST00000413913 EIF4G1Q04637 1599 aaKnown RBP41.64■■■■■ 4.26
PTGDS-203ENST00000413913 CC2D2AQ9P2K1 1620 aa41.6■■■■■ 4.25
PTGDS-203ENST00000413913 CECR2Q9BXF3 1484 aa41.38■■■■■ 4.21
PTGDS-203ENST00000413913 SMARCA4P51532 1647 aa40.54■■■■■ 4.08
PTGDS-203ENST00000413913 NCAPD3P42695 1498 aa40.45■■■■■ 4.07
PTGDS-203ENST00000413913 ATAD2BQ9ULI0 1458 aa40.41■■■■■ 4.06
PTGDS-203ENST00000413913 BAZ1AQ9NRL2 1556 aaPredicted RBP40.4■■■■■ 4.06
PTGDS-203ENST00000413913 SMARCA2P51531 1590 aa40.35■■■■■ 4.05
PTGDS-203ENST00000413913 HMGXB3Q12766 1538 aa40.23■■■■■ 4.03
PTGDS-203ENST00000413913 MROH2BQ7Z745 1585 aa40.14■■■■■ 4.02
PTGDS-203ENST00000413913 PEG3Q9GZU2 1588 aa40.14■■■■■ 4.02
PTGDS-203ENST00000413913 BAZ1BQ9UIG0 1483 aaKnown RBP40.06■■■■■ 4
PTGDS-203ENST00000413913 WIZO95785 1651 aa39.71■■■■□ 3.95
PTGDS-203ENST00000413913 ERCC6Q03468 1493 aa39.68■■■■□ 3.94
PTGDS-203ENST00000413913 NESP48681 1621 aa39.67■■■■□ 3.94
PTGDS-203ENST00000413913 LAMC3Q9Y6N6 1575 aa39.5■■■■□ 3.91
PTGDS-203ENST00000413913 RSF1Q96T23 1441 aaPredicted RBP39.48■■■■□ 3.91
PTGDS-203ENST00000413913 CUX2O14529 1486 aa39.43■■■■□ 3.9
PTGDS-203ENST00000413913 CADPSQ9ULU8 1353 aa39.23■■■■□ 3.87
PTGDS-203ENST00000413913 KIF21AQ7Z4S6 1674 aa39.23■■■■□ 3.87
PTGDS-203ENST00000413913 TOP2AP11388 1531 aaKnown RBP39.23■■■■□ 3.87
PTGDS-203ENST00000413913 PDS5BQ9NTI5 1447 aa39.21■■■■□ 3.87
PTGDS-203ENST00000413913 THOC2Q8NI27 1593 aaKnown RBP39.2■■■■□ 3.87
PTGDS-203ENST00000413913 CFTRP13569 1480 aa38.92■■■■□ 3.82
PTGDS-203ENST00000413913 MRC2Q9UBG0 1479 aa38.86■■■■□ 3.81
PTGDS-203ENST00000413913 FANCD2Q9BXW9 1451 aa38.81■■■■□ 3.8
PTGDS-203ENST00000413913 CEP164Q9UPV0 1460 aa38.81■■■■□ 3.8
PTGDS-203ENST00000413913 DNAJC5Q9H3Z4 198 aa38.78■■■■□ 3.8
PTGDS-203ENST00000413913 WDR62O43379 1518 aa38.77■■■■□ 3.8
PTGDS-203ENST00000413913 CCDC88BA6NC98 1476 aa38.76■■■■□ 3.8
PTGDS-203ENST00000413913 PRDM2Q13029 1718 aa38.66■■■■□ 3.78
PTGDS-203ENST00000413913 URB2Q14146 1524 aaKnown RBP38.48■■■■□ 3.75
PTGDS-203ENST00000413913 TOPBP1Q92547 1522 aa38.14■■■■□ 3.7
PTGDS-203ENST00000413913 SUPT5HO00267 1087 aaKnown RBP38.09■■■■□ 3.69
PTGDS-203ENST00000413913 ABCC8Q09428 1581 aa38.09■■■■□ 3.69
PTGDS-203ENST00000413913 DNMBPQ6XZF7 1577 aa38.07■■■■□ 3.69
PTGDS-203ENST00000413913 IFT140Q96RY7 1462 aa38.01■■■■□ 3.67
PTGDS-203ENST00000413913 ZNF608Q9ULD9 1512 aaPredicted RBP37.91■■■■□ 3.66
PTGDS-203ENST00000413913 TARBP1Q13395 1621 aaKnown RBP37.79■■■■□ 3.64
PTGDS-203ENST00000413913 POLA1P09884 1462 aaPredicted RBP37.79■■■■□ 3.64
PTGDS-203ENST00000413913 EIF4G3O43432 1585 aaKnown RBP37.76■■■■□ 3.64
PTGDS-203ENST00000413913 CUX1P39880 1505 aa37.68■■■■□ 3.62
PTGDS-203ENST00000413913 OSCARQ8IYS5 282 aa37.67■■■■□ 3.62
PTGDS-203ENST00000413913 FGD5Q6ZNL6 1462 aa37.63■■■■□ 3.61
PTGDS-203ENST00000413913 RAD54L2Q9Y4B4 1467 aa37.63■■■■□ 3.61
PTGDS-203ENST00000413913 AQRO60306 1485 aaKnown RBP eCLIP37.61■■■■□ 3.61
PTGDS-203ENST00000413913 SOGA1O94964 1423 aa37.61■■■■□ 3.61
PTGDS-203ENST00000413913 TDRD9Q8NDG6 1382 aaKnown RBP37.46■■■■□ 3.59
PTGDS-203ENST00000413913 WDR97A6NE52 1622 aa37.44■■■■□ 3.58
PTGDS-203ENST00000413913 CHD1O14646 1710 aa37.4■■■■□ 3.58
PTGDS-203ENST00000413913 TRIM41Q8WV44 630 aa37.3■■■■□ 3.56
PTGDS-203ENST00000413913 SNAPC4Q5SXM2 1469 aa37.26■■■■□ 3.56
PTGDS-203ENST00000413913 BIVM-ERCC5R4GMW8 1640 aa37.25■■■■□ 3.55
PTGDS-203ENST00000413913 FBLN2P98095 1184 aa37.24■■■■□ 3.55
PTGDS-203ENST00000413913 GRIN2BQ13224 1484 aa37.24■■■■□ 3.55
PTGDS-203ENST00000413913 TOP2BQ02880 1626 aa37.24■■■■□ 3.55
PTGDS-203ENST00000413913 WRNQ14191 1432 aaPredicted RBP eCLIP37.23■■■■□ 3.55
PTGDS-203ENST00000413913 ABCA10Q8WWZ4 1543 aa37.22■■■■□ 3.55
PTGDS-203ENST00000413913 SYNJ1O43426 1573 aa37.21■■■■□ 3.55
PTGDS-203ENST00000413913 RIMBP3CA6NJZ7 1639 aa37.21■■■■□ 3.55
PTGDS-203ENST00000413913 RIMBP3BA6NNM3 1639 aa37.21■■■■□ 3.55
PTGDS-203ENST00000413913 RIMBP3Q9UFD9 1639 aa37.21■■■■□ 3.55
PTGDS-203ENST00000413913 PBRM1Q86U86 1689 aa37.19■■■■□ 3.54
PTGDS-203ENST00000413913 MAGI1Q96QZ7 1491 aaPredicted RBP37.19■■■■□ 3.54
PTGDS-203ENST00000413913 GAPVD1Q14C86 1478 aa37.17■■■■□ 3.54
PTGDS-203ENST00000413913 ABCA5Q8WWZ7 1642 aa37.16■■■■□ 3.54
PTGDS-203ENST00000413913 ARHGEF11O15085 1522 aa37.12■■■■□ 3.53
PTGDS-203ENST00000413913 SYNJ2O15056 1496 aa37.06■■■■□ 3.52
PTGDS-203ENST00000413913 CHMP7Q8WUX9 453 aaPredicted RBP37.05■■■■□ 3.52
PTGDS-203ENST00000413913 CLASP1Q7Z460 1538 aa36.95■■■■□ 3.51
PTGDS-203ENST00000413913 ADAMTS12P58397 1594 aa36.83■■■■□ 3.49
PTGDS-203ENST00000413913 ARAP1Q96P48 1450 aa36.79■■■■□ 3.48
PTGDS-203ENST00000413913 ERICH3Q5RHP9 1530 aa36.78■■■■□ 3.48
PTGDS-203ENST00000413913 CYB5RLQ6IPT4 315 aa36.77■■■■□ 3.48
PTGDS-203ENST00000413913 GRIN2AQ12879 1464 aa36.76■■■■□ 3.48
PTGDS-203ENST00000413913 FHAD1B1AJZ9 1412 aa36.71■■■■□ 3.47
PTGDS-203ENST00000413913 CEP170Q5SW79 1584 aa36.63■■■■□ 3.45
PTGDS-203ENST00000413913 NUP160Q12769 1436 aa36.6■■■■□ 3.45
PTGDS-203ENST00000413913 KIF27Q86VH2 1401 aa36.49■■■■□ 3.43
PTGDS-203ENST00000413913 SHROOM2Q13796 1616 aa36.43■■■■□ 3.42
PTGDS-203ENST00000413913 ERCC6L2Q5T890 1561 aa36.42■■■■□ 3.42
PTGDS-203ENST00000413913 IGF1RP08069 1367 aa36.4■■■■□ 3.42
PTGDS-203ENST00000413913 CUL7Q14999 1698 aa36.38■■■■□ 3.41
PTGDS-203ENST00000413913 RUSC2Q8N2Y8 1516 aa36.32■■■■□ 3.4
PTGDS-203ENST00000413913 PRG4Q92954 1404 aaPredicted RBP36.21■■■■□ 3.39
Retrieved 100 of 20,778 RNA–protein pairs in 250.1 ms