RNA–Protein interactions for RNA: ENST00000413878.1

CDH2-203, Transcript of cadherin 2, humanhuman

TSL 4

Gene CDH2, Length 563 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH2-203ENST00000413878 NISCHQ9Y2I1 1504 aa34.02■■■■□ 3.04
CDH2-203ENST00000413878 ABCC9O60706 1549 aa30.63■■■□□ 2.49
CDH2-203ENST00000413878 CCDC180Q9P1Z9 1646 aa30.36■■■□□ 2.45
CDH2-203ENST00000413878 RB1CC1Q8TDY2 1594 aa28.99■■■□□ 2.23
CDH2-203ENST00000413878 DNAJC5BQ9UF47 199 aa28.97■■■□□ 2.23
CDH2-203ENST00000413878 NACADO15069 1562 aa28.74■■■□□ 2.19
CDH2-203ENST00000413878 DCAF8L2P0C7V8 631 aa28.51■■■□□ 2.15
CDH2-203ENST00000413878 PABPN1Q86U42 306 aaKnown RBP eCLIP28.47■■■□□ 2.15
CDH2-203ENST00000413878 UNC13AQ9UPW8 1703 aa28.4■■■□□ 2.14
CDH2-203ENST00000413878 ZCCHC6Q5VYS8 1495 aaKnown RBP28.33■■■□□ 2.13
CDH2-203ENST00000413878 MYO15BQ96JP2 1530 aa28.27■■■□□ 2.12
CDH2-203ENST00000413878 BICRAQ9NZM4 1560 aa28.26■■■□□ 2.11
CDH2-203ENST00000413878 DCAF1Q9Y4B6 1507 aa28.13■■■□□ 2.09
CDH2-203ENST00000413878 SHROOM4Q9ULL8 1493 aa27.73■■■□□ 2.03
CDH2-203ENST00000413878 SCRIBQ14160 1630 aa27.7■■■□□ 2.02
CDH2-203ENST00000413878 CC2D2AQ9P2K1 1620 aa27.64■■■□□ 2.02
CDH2-203ENST00000413878 CECR2Q9BXF3 1484 aa27.58■■■□□ 2.01
CDH2-203ENST00000413878 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
CDH2-203ENST00000413878 DNAJC5Q9H3Z4 198 aa26.67■■□□□ 1.86
CDH2-203ENST00000413878 NCAPD3P42695 1498 aa26.55■■□□□ 1.84
CDH2-203ENST00000413878 ATAD2BQ9ULI0 1458 aa26.47■■□□□ 1.83
CDH2-203ENST00000413878 CUX2O14529 1486 aa26.42■■□□□ 1.82
CDH2-203ENST00000413878 SMARCA4P51532 1647 aa26.39■■□□□ 1.82
CDH2-203ENST00000413878 ERCC6Q03468 1493 aa26.39■■□□□ 1.82
CDH2-203ENST00000413878 BAZ1AQ9NRL2 1556 aaPredicted RBP26.37■■□□□ 1.81
CDH2-203ENST00000413878 HMGXB3Q12766 1538 aa26.34■■□□□ 1.81
CDH2-203ENST00000413878 SMARCA2P51531 1590 aa26.33■■□□□ 1.81
CDH2-203ENST00000413878 NESP48681 1621 aa26.28■■□□□ 1.8
CDH2-203ENST00000413878 MROH2BQ7Z745 1585 aa26.22■■□□□ 1.79
CDH2-203ENST00000413878 BAZ1BQ9UIG0 1483 aaKnown RBP26.17■■□□□ 1.78
CDH2-203ENST00000413878 PEG3Q9GZU2 1588 aa26.12■■□□□ 1.77
CDH2-203ENST00000413878 THOC2Q8NI27 1593 aaKnown RBP26.04■■□□□ 1.76
CDH2-203ENST00000413878 LAMC3Q9Y6N6 1575 aa25.98■■□□□ 1.75
CDH2-203ENST00000413878 WIZO95785 1651 aa25.96■■□□□ 1.75
CDH2-203ENST00000413878 RSF1Q96T23 1441 aaPredicted RBP25.94■■□□□ 1.74
CDH2-203ENST00000413878 KIF21AQ7Z4S6 1674 aa25.9■■□□□ 1.74
CDH2-203ENST00000413878 PDS5BQ9NTI5 1447 aa25.8■■□□□ 1.72
CDH2-203ENST00000413878 CADPSQ9ULU8 1353 aa25.73■■□□□ 1.71
CDH2-203ENST00000413878 TOP2AP11388 1531 aaKnown RBP25.67■■□□□ 1.7
CDH2-203ENST00000413878 MRC2Q9UBG0 1479 aa25.65■■□□□ 1.7
CDH2-203ENST00000413878 WDR62O43379 1518 aa25.6■■□□□ 1.69
CDH2-203ENST00000413878 CEP164Q9UPV0 1460 aa25.48■■□□□ 1.67
CDH2-203ENST00000413878 FANCD2Q9BXW9 1451 aa25.46■■□□□ 1.67
CDH2-203ENST00000413878 TRIM41Q8WV44 630 aa25.42■■□□□ 1.66
CDH2-203ENST00000413878 CFTRP13569 1480 aa25.41■■□□□ 1.66
CDH2-203ENST00000413878 CCDC88BA6NC98 1476 aa25.38■■□□□ 1.65
CDH2-203ENST00000413878 SUPT5HO00267 1087 aaKnown RBP25.37■■□□□ 1.65
CDH2-203ENST00000413878 URB2Q14146 1524 aaKnown RBP25.31■■□□□ 1.64
CDH2-203ENST00000413878 PRDM2Q13029 1718 aa25.17■■□□□ 1.62
CDH2-203ENST00000413878 OSCARQ8IYS5 282 aa25.14■■□□□ 1.62
CDH2-203ENST00000413878 ZNF608Q9ULD9 1512 aaPredicted RBP25.03■■□□□ 1.6
CDH2-203ENST00000413878 IFT140Q96RY7 1462 aa24.97■■□□□ 1.59
CDH2-203ENST00000413878 TOPBP1Q92547 1522 aa24.96■■□□□ 1.59
CDH2-203ENST00000413878 RIMBP3CA6NJZ7 1639 aa24.94■■□□□ 1.58
CDH2-203ENST00000413878 RIMBP3BA6NNM3 1639 aa24.94■■□□□ 1.58
CDH2-203ENST00000413878 RIMBP3Q9UFD9 1639 aa24.94■■□□□ 1.58
CDH2-203ENST00000413878 EIF4G3O43432 1585 aaKnown RBP24.86■■□□□ 1.57
CDH2-203ENST00000413878 DNMBPQ6XZF7 1577 aa24.84■■□□□ 1.57
CDH2-203ENST00000413878 ARHGEF11O15085 1522 aa24.82■■□□□ 1.56
CDH2-203ENST00000413878 ABCC8Q09428 1581 aa24.8■■□□□ 1.56
CDH2-203ENST00000413878 TARBP1Q13395 1621 aaKnown RBP24.78■■□□□ 1.56
CDH2-203ENST00000413878 AQRO60306 1485 aaKnown RBP eCLIP24.75■■□□□ 1.55
CDH2-203ENST00000413878 CHD1O14646 1710 aa24.71■■□□□ 1.55
CDH2-203ENST00000413878 POLA1P09884 1462 aaPredicted RBP24.7■■□□□ 1.55
CDH2-203ENST00000413878 RAD54L2Q9Y4B4 1467 aa24.64■■□□□ 1.53
CDH2-203ENST00000413878 CYB5RLQ6IPT4 315 aa24.61■■□□□ 1.53
CDH2-203ENST00000413878 ARAP1Q96P48 1450 aa24.6■■□□□ 1.53
CDH2-203ENST00000413878 CUX1P39880 1505 aa24.6■■□□□ 1.53
CDH2-203ENST00000413878 FBLN2P98095 1184 aa24.56■■□□□ 1.52
CDH2-203ENST00000413878 TDRD9Q8NDG6 1382 aaKnown RBP24.55■■□□□ 1.52
CDH2-203ENST00000413878 SOGA1O94964 1423 aa24.53■■□□□ 1.52
CDH2-203ENST00000413878 FGD5Q6ZNL6 1462 aa24.51■■□□□ 1.51
CDH2-203ENST00000413878 SNAPC4Q5SXM2 1469 aa24.49■■□□□ 1.51
CDH2-203ENST00000413878 WRNQ14191 1432 aaPredicted RBP eCLIP24.46■■□□□ 1.51
CDH2-203ENST00000413878 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
CDH2-203ENST00000413878 WDR97A6NE52 1622 aa24.43■■□□□ 1.5
CDH2-203ENST00000413878 TOP2BQ02880 1626 aa24.4■■□□□ 1.5
CDH2-203ENST00000413878 BIVM-ERCC5R4GMW8 1640 aa24.39■■□□□ 1.5
CDH2-203ENST00000413878 SYNJ1O43426 1573 aa24.39■■□□□ 1.5
CDH2-203ENST00000413878 MAGI1Q96QZ7 1491 aaPredicted RBP24.38■■□□□ 1.49
CDH2-203ENST00000413878 TRHP20396 242 aaPredicted RBP24.37■■□□□ 1.49
CDH2-203ENST00000413878 GRIN2BQ13224 1484 aa24.36■■□□□ 1.49
CDH2-203ENST00000413878 CHMP7Q8WUX9 453 aaPredicted RBP24.33■■□□□ 1.49
CDH2-203ENST00000413878 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
CDH2-203ENST00000413878 ABCA10Q8WWZ4 1543 aa24.27■■□□□ 1.48
CDH2-203ENST00000413878 PBRM1Q86U86 1689 aa24.27■■□□□ 1.48
CDH2-203ENST00000413878 GAPVD1Q14C86 1478 aa24.25■■□□□ 1.47
CDH2-203ENST00000413878 ABCA5Q8WWZ7 1642 aa24.21■■□□□ 1.47
CDH2-203ENST00000413878 ERCC6L2Q5T890 1561 aa24.09■■□□□ 1.45
CDH2-203ENST00000413878 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
CDH2-203ENST00000413878 ADAMTS12P58397 1594 aa24.05■■□□□ 1.44
CDH2-203ENST00000413878 CEP170Q5SW79 1584 aa24.02■■□□□ 1.44
CDH2-203ENST00000413878 NUP160Q12769 1436 aa24.01■■□□□ 1.43
CDH2-203ENST00000413878 ERICH3Q5RHP9 1530 aa23.98■■□□□ 1.43
CDH2-203ENST00000413878 KIF27Q86VH2 1401 aa23.96■■□□□ 1.43
CDH2-203ENST00000413878 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
CDH2-203ENST00000413878 FHAD1B1AJZ9 1412 aa23.93■■□□□ 1.42
CDH2-203ENST00000413878 IGF1RP08069 1367 aa23.85■■□□□ 1.41
CDH2-203ENST00000413878 CUL7Q14999 1698 aa23.78■■□□□ 1.4
CDH2-203ENST00000413878 PRG4Q92954 1404 aaPredicted RBP23.77■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms