RNA–Protein interactions for RNA: ENST00000413837.1

PGAM1P7-201, Transcript of phosphoglycerate mutase 1 pseudogene 7, humanhuman

BASIC

Gene PGAM1P7, Length 737 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAM1P7-201ENST00000413837 NISCHQ9Y2I1 1504 aa29.41■■■□□ 2.3
PGAM1P7-201ENST00000413837 CCDC180Q9P1Z9 1646 aa26.21■■□□□ 1.79
PGAM1P7-201ENST00000413837 ABCC9O60706 1549 aa25.12■■□□□ 1.61
PGAM1P7-201ENST00000413837 ZCCHC6Q5VYS8 1495 aaKnown RBP24.57■■□□□ 1.52
PGAM1P7-201ENST00000413837 MYO15BQ96JP2 1530 aa24.51■■□□□ 1.51
PGAM1P7-201ENST00000413837 NACADO15069 1562 aa24.5■■□□□ 1.51
PGAM1P7-201ENST00000413837 DCAF1Q9Y4B6 1507 aa24.46■■□□□ 1.51
PGAM1P7-201ENST00000413837 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
PGAM1P7-201ENST00000413837 DCAF8L2P0C7V8 631 aa24.16■■□□□ 1.46
PGAM1P7-201ENST00000413837 UNC13AQ9UPW8 1703 aa24.01■■□□□ 1.43
PGAM1P7-201ENST00000413837 SCRIBQ14160 1630 aa23.72■■□□□ 1.39
PGAM1P7-201ENST00000413837 BICRAQ9NZM4 1560 aa23.69■■□□□ 1.38
PGAM1P7-201ENST00000413837 SHROOM4Q9ULL8 1493 aa23.57■■□□□ 1.36
PGAM1P7-201ENST00000413837 PABPN1Q86U42 306 aaKnown RBP eCLIP23.41■■□□□ 1.34
PGAM1P7-201ENST00000413837 EIF4G1Q04637 1599 aaKnown RBP23.01■■□□□ 1.27
PGAM1P7-201ENST00000413837 CC2D2AQ9P2K1 1620 aa22.86■■□□□ 1.25
PGAM1P7-201ENST00000413837 BAZ1AQ9NRL2 1556 aaPredicted RBP22.81■■□□□ 1.24
PGAM1P7-201ENST00000413837 SMARCA4P51532 1647 aa22.81■■□□□ 1.24
PGAM1P7-201ENST00000413837 CECR2Q9BXF3 1484 aa22.79■■□□□ 1.24
PGAM1P7-201ENST00000413837 DNAJC5BQ9UF47 199 aa22.78■■□□□ 1.24
PGAM1P7-201ENST00000413837 PEG3Q9GZU2 1588 aa22.66■■□□□ 1.22
PGAM1P7-201ENST00000413837 MROH2BQ7Z745 1585 aa22.62■■□□□ 1.21
PGAM1P7-201ENST00000413837 SMARCA2P51531 1590 aa22.61■■□□□ 1.21
PGAM1P7-201ENST00000413837 ATAD2BQ9ULI0 1458 aa22.55■■□□□ 1.2
PGAM1P7-201ENST00000413837 NCAPD3P42695 1498 aa22.54■■□□□ 1.2
PGAM1P7-201ENST00000413837 HMGXB3Q12766 1538 aa22.52■■□□□ 1.2
PGAM1P7-201ENST00000413837 RSF1Q96T23 1441 aaPredicted RBP22.44■■□□□ 1.18
PGAM1P7-201ENST00000413837 WIZO95785 1651 aa22.42■■□□□ 1.18
PGAM1P7-201ENST00000413837 BAZ1BQ9UIG0 1483 aaKnown RBP22.37■■□□□ 1.17
PGAM1P7-201ENST00000413837 TOP2AP11388 1531 aaKnown RBP22.23■■□□□ 1.15
PGAM1P7-201ENST00000413837 LAMC3Q9Y6N6 1575 aa21.97■■□□□ 1.11
PGAM1P7-201ENST00000413837 CCDC88BA6NC98 1476 aa21.89■■□□□ 1.09
PGAM1P7-201ENST00000413837 PRDM2Q13029 1718 aa21.89■■□□□ 1.09
PGAM1P7-201ENST00000413837 SUPT5HO00267 1087 aaKnown RBP21.84■■□□□ 1.09
PGAM1P7-201ENST00000413837 CADPSQ9ULU8 1353 aa21.84■■□□□ 1.09
PGAM1P7-201ENST00000413837 NESP48681 1621 aa21.83■■□□□ 1.08
PGAM1P7-201ENST00000413837 CFTRP13569 1480 aa21.82■■□□□ 1.08
PGAM1P7-201ENST00000413837 KIF21AQ7Z4S6 1674 aa21.72■■□□□ 1.07
PGAM1P7-201ENST00000413837 PDS5BQ9NTI5 1447 aa21.72■■□□□ 1.07
PGAM1P7-201ENST00000413837 ERCC6Q03468 1493 aa21.64■■□□□ 1.06
PGAM1P7-201ENST00000413837 FANCD2Q9BXW9 1451 aa21.59■■□□□ 1.05
PGAM1P7-201ENST00000413837 THOC2Q8NI27 1593 aaKnown RBP21.59■■□□□ 1.05
PGAM1P7-201ENST00000413837 CEP164Q9UPV0 1460 aa21.57■■□□□ 1.04
PGAM1P7-201ENST00000413837 MRC2Q9UBG0 1479 aa21.49■■□□□ 1.03
PGAM1P7-201ENST00000413837 WDR62O43379 1518 aa21.46■■□□□ 1.03
PGAM1P7-201ENST00000413837 CUX2O14529 1486 aa21.45■■□□□ 1.03
PGAM1P7-201ENST00000413837 ABCC8Q09428 1581 aa21.39■■□□□ 1.01
PGAM1P7-201ENST00000413837 URB2Q14146 1524 aaKnown RBP21.38■■□□□ 1.01
PGAM1P7-201ENST00000413837 DNMBPQ6XZF7 1577 aa21.35■■□□□ 1.01
PGAM1P7-201ENST00000413837 TOPBP1Q92547 1522 aa21.3■■□□□ 1
PGAM1P7-201ENST00000413837 CUX1P39880 1505 aa21.22■□□□□ 0.99
PGAM1P7-201ENST00000413837 BIVM-ERCC5R4GMW8 1640 aa21.22■□□□□ 0.99
PGAM1P7-201ENST00000413837 TOP2BQ02880 1626 aa21.18■□□□□ 0.98
PGAM1P7-201ENST00000413837 WRNQ14191 1432 aaPredicted RBP eCLIP21.14■□□□□ 0.98
PGAM1P7-201ENST00000413837 TARBP1Q13395 1621 aaKnown RBP21.13■□□□□ 0.97
PGAM1P7-201ENST00000413837 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
PGAM1P7-201ENST00000413837 SYNJ1O43426 1573 aa21.12■□□□□ 0.97
PGAM1P7-201ENST00000413837 IFT140Q96RY7 1462 aa21.12■□□□□ 0.97
PGAM1P7-201ENST00000413837 FGD5Q6ZNL6 1462 aa21.09■□□□□ 0.97
PGAM1P7-201ENST00000413837 WDR97A6NE52 1622 aa21.07■□□□□ 0.96
PGAM1P7-201ENST00000413837 SOGA1O94964 1423 aa20.99■□□□□ 0.95
PGAM1P7-201ENST00000413837 ABCA10Q8WWZ4 1543 aa20.96■□□□□ 0.95
PGAM1P7-201ENST00000413837 EIF4G3O43432 1585 aaKnown RBP20.96■□□□□ 0.95
PGAM1P7-201ENST00000413837 RAD54L2Q9Y4B4 1467 aa20.94■□□□□ 0.94
PGAM1P7-201ENST00000413837 ZNF608Q9ULD9 1512 aaPredicted RBP20.93■□□□□ 0.94
PGAM1P7-201ENST00000413837 ABCA5Q8WWZ7 1642 aa20.9■□□□□ 0.94
PGAM1P7-201ENST00000413837 PBRM1Q86U86 1689 aa20.86■□□□□ 0.93
PGAM1P7-201ENST00000413837 AQRO60306 1485 aaKnown RBP eCLIP20.81■□□□□ 0.92
PGAM1P7-201ENST00000413837 GAPVD1Q14C86 1478 aa20.8■□□□□ 0.92
PGAM1P7-201ENST00000413837 TDRD9Q8NDG6 1382 aaKnown RBP20.79■□□□□ 0.92
PGAM1P7-201ENST00000413837 GRIN2BQ13224 1484 aa20.77■□□□□ 0.92
PGAM1P7-201ENST00000413837 MAGI1Q96QZ7 1491 aaPredicted RBP20.75■□□□□ 0.91
PGAM1P7-201ENST00000413837 ERICH3Q5RHP9 1530 aa20.74■□□□□ 0.91
PGAM1P7-201ENST00000413837 CHD1O14646 1710 aa20.7■□□□□ 0.9
PGAM1P7-201ENST00000413837 KIF27Q86VH2 1401 aa20.7■□□□□ 0.9
PGAM1P7-201ENST00000413837 TRIM41Q8WV44 630 aa20.69■□□□□ 0.9
PGAM1P7-201ENST00000413837 SNAPC4Q5SXM2 1469 aa20.67■□□□□ 0.9
PGAM1P7-201ENST00000413837 ADAMTS12P58397 1594 aa20.65■□□□□ 0.9
PGAM1P7-201ENST00000413837 CUL7Q14999 1698 aa20.64■□□□□ 0.9
PGAM1P7-201ENST00000413837 SYNJ2O15056 1496 aa20.62■□□□□ 0.89
PGAM1P7-201ENST00000413837 CHIC1Q5VXU3 224 aa20.61■□□□□ 0.89
PGAM1P7-201ENST00000413837 FHAD1B1AJZ9 1412 aa20.57■□□□□ 0.88
PGAM1P7-201ENST00000413837 IGF1RP08069 1367 aa20.55■□□□□ 0.88
PGAM1P7-201ENST00000413837 EEA1Q15075 1411 aa20.53■□□□□ 0.88
PGAM1P7-201ENST00000413837 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
PGAM1P7-201ENST00000413837 RUSC2Q8N2Y8 1516 aa20.5■□□□□ 0.87
PGAM1P7-201ENST00000413837 OSCARQ8IYS5 282 aa20.48■□□□□ 0.87
PGAM1P7-201ENST00000413837 CHMP7Q8WUX9 453 aaPredicted RBP20.47■□□□□ 0.87
PGAM1P7-201ENST00000413837 CLASP1Q7Z460 1538 aa20.45■□□□□ 0.86
PGAM1P7-201ENST00000413837 NUP160Q12769 1436 aa20.44■□□□□ 0.86
PGAM1P7-201ENST00000413837 CARMIL1Q5VZK9 1371 aa20.42■□□□□ 0.86
PGAM1P7-201ENST00000413837 CEP170Q5SW79 1584 aa20.41■□□□□ 0.86
PGAM1P7-201ENST00000413837 FBLN2P98095 1184 aa20.4■□□□□ 0.86
PGAM1P7-201ENST00000413837 DNAJC5Q9H3Z4 198 aa20.4■□□□□ 0.86
PGAM1P7-201ENST00000413837 PRXQ9BXM0 1461 aa20.39■□□□□ 0.85
PGAM1P7-201ENST00000413837 RAPGEF2Q9Y4G8 1499 aa20.37■□□□□ 0.85
PGAM1P7-201ENST00000413837 SHROOM2Q13796 1616 aa20.35■□□□□ 0.85
PGAM1P7-201ENST00000413837 KIF21BO75037 1637 aa20.33■□□□□ 0.84
PGAM1P7-201ENST00000413837 CTTNBP2Q8WZ74 1663 aa20.32■□□□□ 0.84
PGAM1P7-201ENST00000413837 CSRNP3Q8WYN3 585 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms