RNA–Protein interactions for RNA: ENST00000413819.1

TRGVA-201, Transcript of T cell receptor gamma variable A (pseudogene), humanhuman

BASIC

Gene TRGVA, Length 285 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRGVA-201ENST00000413819 NISCHQ9Y2I1 1504 aa24.66■■□□□ 1.54
TRGVA-201ENST00000413819 ABCC9O60706 1549 aa22.47■■□□□ 1.19
TRGVA-201ENST00000413819 CCDC180Q9P1Z9 1646 aa22.24■■□□□ 1.15
TRGVA-201ENST00000413819 DNAJC5BQ9UF47 199 aa21.32■■□□□ 1
TRGVA-201ENST00000413819 RB1CC1Q8TDY2 1594 aa21.3■■□□□ 1
TRGVA-201ENST00000413819 NACADO15069 1562 aa21.1■□□□□ 0.97
TRGVA-201ENST00000413819 PABPN1Q86U42 306 aaKnown RBP eCLIP20.87■□□□□ 0.93
TRGVA-201ENST00000413819 DCAF8L2P0C7V8 631 aa20.84■□□□□ 0.93
TRGVA-201ENST00000413819 MYO15BQ96JP2 1530 aa20.76■□□□□ 0.91
TRGVA-201ENST00000413819 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
TRGVA-201ENST00000413819 BICRAQ9NZM4 1560 aa20.69■□□□□ 0.9
TRGVA-201ENST00000413819 SHROOM4Q9ULL8 1493 aa20.45■□□□□ 0.86
TRGVA-201ENST00000413819 ZCCHC6Q5VYS8 1495 aaKnown RBP20.39■□□□□ 0.85
TRGVA-201ENST00000413819 DCAF1Q9Y4B6 1507 aa20.38■□□□□ 0.85
TRGVA-201ENST00000413819 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
TRGVA-201ENST00000413819 CC2D2AQ9P2K1 1620 aa20.29■□□□□ 0.84
TRGVA-201ENST00000413819 SCRIBQ14160 1630 aa20.21■□□□□ 0.83
TRGVA-201ENST00000413819 EIF4G1Q04637 1599 aaKnown RBP20.21■□□□□ 0.83
TRGVA-201ENST00000413819 DNAJC5Q9H3Z4 198 aa19.8■□□□□ 0.76
TRGVA-201ENST00000413819 CUX2O14529 1486 aa19.53■□□□□ 0.72
TRGVA-201ENST00000413819 NCAPD3P42695 1498 aa19.5■□□□□ 0.71
TRGVA-201ENST00000413819 ERCC6Q03468 1493 aa19.43■□□□□ 0.7
TRGVA-201ENST00000413819 ATAD2BQ9ULI0 1458 aa19.38■□□□□ 0.69
TRGVA-201ENST00000413819 HMGXB3Q12766 1538 aa19.32■□□□□ 0.68
TRGVA-201ENST00000413819 SMARCA2P51531 1590 aa19.32■□□□□ 0.68
TRGVA-201ENST00000413819 SMARCA4P51532 1647 aa19.28■□□□□ 0.68
TRGVA-201ENST00000413819 NESP48681 1621 aa19.23■□□□□ 0.67
TRGVA-201ENST00000413819 BAZ1BQ9UIG0 1483 aaKnown RBP19.17■□□□□ 0.66
TRGVA-201ENST00000413819 BAZ1AQ9NRL2 1556 aaPredicted RBP19.16■□□□□ 0.66
TRGVA-201ENST00000413819 PEG3Q9GZU2 1588 aa19.12■□□□□ 0.65
TRGVA-201ENST00000413819 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
TRGVA-201ENST00000413819 LAMC3Q9Y6N6 1575 aa19.08■□□□□ 0.65
TRGVA-201ENST00000413819 MROH2BQ7Z745 1585 aa18.98■□□□□ 0.63
TRGVA-201ENST00000413819 PDS5BQ9NTI5 1447 aa18.98■□□□□ 0.63
TRGVA-201ENST00000413819 KIF21AQ7Z4S6 1674 aa18.94■□□□□ 0.62
TRGVA-201ENST00000413819 CADPSQ9ULU8 1353 aa18.88■□□□□ 0.61
TRGVA-201ENST00000413819 MRC2Q9UBG0 1479 aa18.84■□□□□ 0.61
TRGVA-201ENST00000413819 WDR62O43379 1518 aa18.81■□□□□ 0.6
TRGVA-201ENST00000413819 TRIM41Q8WV44 630 aa18.76■□□□□ 0.59
TRGVA-201ENST00000413819 CEP164Q9UPV0 1460 aa18.71■□□□□ 0.59
TRGVA-201ENST00000413819 WIZO95785 1651 aa18.7■□□□□ 0.58
TRGVA-201ENST00000413819 FANCD2Q9BXW9 1451 aa18.65■□□□□ 0.58
TRGVA-201ENST00000413819 CFTRP13569 1480 aa18.62■□□□□ 0.57
TRGVA-201ENST00000413819 OSCARQ8IYS5 282 aa18.56■□□□□ 0.56
TRGVA-201ENST00000413819 URB2Q14146 1524 aaKnown RBP18.52■□□□□ 0.56
TRGVA-201ENST00000413819 RSF1Q96T23 1441 aaPredicted RBP18.51■□□□□ 0.55
TRGVA-201ENST00000413819 TOP2AP11388 1531 aaKnown RBP18.5■□□□□ 0.55
TRGVA-201ENST00000413819 IFT140Q96RY7 1462 aa18.35■□□□□ 0.53
TRGVA-201ENST00000413819 RIMBP3CA6NJZ7 1639 aa18.33■□□□□ 0.52
TRGVA-201ENST00000413819 RIMBP3BA6NNM3 1639 aa18.33■□□□□ 0.52
TRGVA-201ENST00000413819 RIMBP3Q9UFD9 1639 aa18.33■□□□□ 0.52
TRGVA-201ENST00000413819 ZNF608Q9ULD9 1512 aaPredicted RBP18.33■□□□□ 0.52
TRGVA-201ENST00000413819 PRDM2Q13029 1718 aa18.32■□□□□ 0.52
TRGVA-201ENST00000413819 ARHGEF11O15085 1522 aa18.28■□□□□ 0.52
TRGVA-201ENST00000413819 CCDC88BA6NC98 1476 aa18.27■□□□□ 0.52
TRGVA-201ENST00000413819 TOPBP1Q92547 1522 aa18.27■□□□□ 0.51
TRGVA-201ENST00000413819 ABCC8Q09428 1581 aa18.22■□□□□ 0.51
TRGVA-201ENST00000413819 EIF4G3O43432 1585 aaKnown RBP18.21■□□□□ 0.51
TRGVA-201ENST00000413819 DNMBPQ6XZF7 1577 aa18.18■□□□□ 0.5
TRGVA-201ENST00000413819 TARBP1Q13395 1621 aaKnown RBP18.12■□□□□ 0.49
TRGVA-201ENST00000413819 AQRO60306 1485 aaKnown RBP eCLIP18.12■□□□□ 0.49
TRGVA-201ENST00000413819 CYB5RLQ6IPT4 315 aa18.11■□□□□ 0.49
TRGVA-201ENST00000413819 ARAP1Q96P48 1450 aa18.08■□□□□ 0.49
TRGVA-201ENST00000413819 CHD1O14646 1710 aa18.08■□□□□ 0.48
TRGVA-201ENST00000413819 POLA1P09884 1462 aaPredicted RBP18.07■□□□□ 0.48
TRGVA-201ENST00000413819 FBLN2P98095 1184 aa18.01■□□□□ 0.47
TRGVA-201ENST00000413819 RAD54L2Q9Y4B4 1467 aa17.99■□□□□ 0.47
TRGVA-201ENST00000413819 TRHP20396 242 aaPredicted RBP17.98■□□□□ 0.47
TRGVA-201ENST00000413819 SOGA1O94964 1423 aa17.97■□□□□ 0.47
TRGVA-201ENST00000413819 TDRD9Q8NDG6 1382 aaKnown RBP17.96■□□□□ 0.47
TRGVA-201ENST00000413819 WDR97A6NE52 1622 aa17.95■□□□□ 0.46
TRGVA-201ENST00000413819 SNAPC4Q5SXM2 1469 aa17.94■□□□□ 0.46
TRGVA-201ENST00000413819 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
TRGVA-201ENST00000413819 FGD5Q6ZNL6 1462 aa17.91■□□□□ 0.46
TRGVA-201ENST00000413819 MAGI1Q96QZ7 1491 aaPredicted RBP17.9■□□□□ 0.46
TRGVA-201ENST00000413819 SYNJ1O43426 1573 aa17.88■□□□□ 0.45
TRGVA-201ENST00000413819 CHMP7Q8WUX9 453 aaPredicted RBP17.87■□□□□ 0.45
TRGVA-201ENST00000413819 GRIN2BQ13224 1484 aa17.87■□□□□ 0.45
TRGVA-201ENST00000413819 CUX1P39880 1505 aa17.86■□□□□ 0.45
TRGVA-201ENST00000413819 SYNJ2O15056 1496 aa17.84■□□□□ 0.45
TRGVA-201ENST00000413819 GAPVD1Q14C86 1478 aa17.75■□□□□ 0.43
TRGVA-201ENST00000413819 PBRM1Q86U86 1689 aa17.71■□□□□ 0.43
TRGVA-201ENST00000413819 ABCA10Q8WWZ4 1543 aa17.71■□□□□ 0.43
TRGVA-201ENST00000413819 ABCA5Q8WWZ7 1642 aa17.7■□□□□ 0.42
TRGVA-201ENST00000413819 AEBP2Q6ZN18 517 aaPredicted RBP17.66■□□□□ 0.42
TRGVA-201ENST00000413819 GRIN2AQ12879 1464 aa17.63■□□□□ 0.41
TRGVA-201ENST00000413819 ERCC6L2Q5T890 1561 aa17.61■□□□□ 0.41
TRGVA-201ENST00000413819 NUP160Q12769 1436 aa17.6■□□□□ 0.41
TRGVA-201ENST00000413819 ADAMTS12P58397 1594 aa17.58■□□□□ 0.41
TRGVA-201ENST00000413819 WRNQ14191 1432 aaPredicted RBP eCLIP17.58■□□□□ 0.41
TRGVA-201ENST00000413819 CEP170Q5SW79 1584 aa17.57■□□□□ 0.4
TRGVA-201ENST00000413819 SHROOM2Q13796 1616 aa17.54■□□□□ 0.4
TRGVA-201ENST00000413819 FHAD1B1AJZ9 1412 aa17.53■□□□□ 0.4
TRGVA-201ENST00000413819 TOP2BQ02880 1626 aa17.49■□□□□ 0.39
TRGVA-201ENST00000413819 BIVM-ERCC5R4GMW8 1640 aa17.49■□□□□ 0.39
TRGVA-201ENST00000413819 ERICH3Q5RHP9 1530 aa17.48■□□□□ 0.39
TRGVA-201ENST00000413819 PRG4Q92954 1404 aaPredicted RBP17.42■□□□□ 0.38
TRGVA-201ENST00000413819 SUPT5HO00267 1087 aaKnown RBP17.41■□□□□ 0.38
TRGVA-201ENST00000413819 KIF13AQ9H1H9 1805 aa17.37■□□□□ 0.37
TRGVA-201ENST00000413819 JPH4Q96JJ6 628 aa17.37■□□□□ 0.37
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