RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 NISCHQ9Y2I1 1504 aa41.42■■■■■ 4.22
COL6A2-205ENST00000413758 CCDC180Q9P1Z9 1646 aa37.02■■■■□ 3.52
COL6A2-205ENST00000413758 ABCC9O60706 1549 aa36.83■■■■□ 3.49
COL6A2-205ENST00000413758 RB1CC1Q8TDY2 1594 aa35.15■■■■□ 3.22
COL6A2-205ENST00000413758 DCAF8L2P0C7V8 631 aa35.05■■■■□ 3.2
COL6A2-205ENST00000413758 NACADO15069 1562 aa34.95■■■■□ 3.18
COL6A2-205ENST00000413758 MYO15BQ96JP2 1530 aa34.49■■■■□ 3.11
COL6A2-205ENST00000413758 PABPN1Q86U42 306 aaKnown RBP eCLIP34.37■■■■□ 3.09
COL6A2-205ENST00000413758 ZCCHC6Q5VYS8 1495 aaKnown RBP34.37■■■■□ 3.09
COL6A2-205ENST00000413758 UNC13AQ9UPW8 1703 aa34.3■■■■□ 3.08
COL6A2-205ENST00000413758 DNAJC5BQ9UF47 199 aa34.22■■■■□ 3.07
COL6A2-205ENST00000413758 DCAF1Q9Y4B6 1507 aa34.17■■■■□ 3.06
COL6A2-205ENST00000413758 BICRAQ9NZM4 1560 aa34.04■■■■□ 3.04
COL6A2-205ENST00000413758 SCRIBQ14160 1630 aa33.84■■■■□ 3.01
COL6A2-205ENST00000413758 SHROOM4Q9ULL8 1493 aa33.61■■■□□ 2.97
COL6A2-205ENST00000413758 CC2D2AQ9P2K1 1620 aa33.24■■■□□ 2.91
COL6A2-205ENST00000413758 EIF4G1Q04637 1599 aaKnown RBP33.22■■■□□ 2.91
COL6A2-205ENST00000413758 CECR2Q9BXF3 1484 aa33.12■■■□□ 2.89
COL6A2-205ENST00000413758 SMARCA4P51532 1647 aa32.26■■■□□ 2.75
COL6A2-205ENST00000413758 NCAPD3P42695 1498 aa32.24■■■□□ 2.75
COL6A2-205ENST00000413758 ATAD2BQ9ULI0 1458 aa32.21■■■□□ 2.75
COL6A2-205ENST00000413758 SMARCA2P51531 1590 aa32.15■■■□□ 2.74
COL6A2-205ENST00000413758 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
COL6A2-205ENST00000413758 HMGXB3Q12766 1538 aa32.03■■■□□ 2.72
COL6A2-205ENST00000413758 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
COL6A2-205ENST00000413758 MROH2BQ7Z745 1585 aa31.93■■■□□ 2.7
COL6A2-205ENST00000413758 PEG3Q9GZU2 1588 aa31.87■■■□□ 2.69
COL6A2-205ENST00000413758 ERCC6Q03468 1493 aa31.82■■■□□ 2.68
COL6A2-205ENST00000413758 NESP48681 1621 aa31.69■■■□□ 2.66
COL6A2-205ENST00000413758 WIZO95785 1651 aa31.58■■■□□ 2.65
COL6A2-205ENST00000413758 CUX2O14529 1486 aa31.57■■■□□ 2.64
COL6A2-205ENST00000413758 LAMC3Q9Y6N6 1575 aa31.49■■■□□ 2.63
COL6A2-205ENST00000413758 RSF1Q96T23 1441 aaPredicted RBP31.38■■■□□ 2.61
COL6A2-205ENST00000413758 PDS5BQ9NTI5 1447 aa31.35■■■□□ 2.61
COL6A2-205ENST00000413758 CADPSQ9ULU8 1353 aa31.32■■■□□ 2.6
COL6A2-205ENST00000413758 KIF21AQ7Z4S6 1674 aa31.29■■■□□ 2.6
COL6A2-205ENST00000413758 THOC2Q8NI27 1593 aaKnown RBP31.26■■■□□ 2.59
COL6A2-205ENST00000413758 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
COL6A2-205ENST00000413758 TOP2AP11388 1531 aaKnown RBP31.19■■■□□ 2.58
COL6A2-205ENST00000413758 MRC2Q9UBG0 1479 aa31.04■■■□□ 2.56
COL6A2-205ENST00000413758 CEP164Q9UPV0 1460 aa31■■■□□ 2.55
COL6A2-205ENST00000413758 CFTRP13569 1480 aa30.99■■■□□ 2.55
COL6A2-205ENST00000413758 FANCD2Q9BXW9 1451 aa30.98■■■□□ 2.55
COL6A2-205ENST00000413758 WDR62O43379 1518 aa30.91■■■□□ 2.54
COL6A2-205ENST00000413758 CCDC88BA6NC98 1476 aa30.85■■■□□ 2.53
COL6A2-205ENST00000413758 PRDM2Q13029 1718 aa30.71■■■□□ 2.51
COL6A2-205ENST00000413758 URB2Q14146 1524 aaKnown RBP30.68■■■□□ 2.5
COL6A2-205ENST00000413758 TOPBP1Q92547 1522 aa30.41■■■□□ 2.46
COL6A2-205ENST00000413758 SUPT5HO00267 1087 aaKnown RBP30.38■■■□□ 2.45
COL6A2-205ENST00000413758 ABCC8Q09428 1581 aa30.37■■■□□ 2.45
COL6A2-205ENST00000413758 IFT140Q96RY7 1462 aa30.35■■■□□ 2.45
COL6A2-205ENST00000413758 DNMBPQ6XZF7 1577 aa30.32■■■□□ 2.45
COL6A2-205ENST00000413758 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
COL6A2-205ENST00000413758 OSCARQ8IYS5 282 aa30.25■■■□□ 2.43
COL6A2-205ENST00000413758 TRIM41Q8WV44 630 aa30.13■■■□□ 2.41
COL6A2-205ENST00000413758 POLA1P09884 1462 aaPredicted RBP30.11■■■□□ 2.41
COL6A2-205ENST00000413758 EIF4G3O43432 1585 aaKnown RBP30.11■■■□□ 2.41
COL6A2-205ENST00000413758 TARBP1Q13395 1621 aaKnown RBP30.07■■■□□ 2.4
COL6A2-205ENST00000413758 AQRO60306 1485 aaKnown RBP eCLIP30.06■■■□□ 2.4
COL6A2-205ENST00000413758 RAD54L2Q9Y4B4 1467 aa30.03■■■□□ 2.4
COL6A2-205ENST00000413758 SOGA1O94964 1423 aa30.03■■■□□ 2.4
COL6A2-205ENST00000413758 FGD5Q6ZNL6 1462 aa29.99■■■□□ 2.39
COL6A2-205ENST00000413758 CUX1P39880 1505 aa29.98■■■□□ 2.39
COL6A2-205ENST00000413758 TDRD9Q8NDG6 1382 aaKnown RBP29.94■■■□□ 2.38
COL6A2-205ENST00000413758 FBLN2P98095 1184 aa29.92■■■□□ 2.38
COL6A2-205ENST00000413758 CHD1O14646 1710 aa29.85■■■□□ 2.37
COL6A2-205ENST00000413758 WDR97A6NE52 1622 aa29.79■■■□□ 2.36
COL6A2-205ENST00000413758 RIMBP3CA6NJZ7 1639 aa29.77■■■□□ 2.36
COL6A2-205ENST00000413758 RIMBP3BA6NNM3 1639 aa29.77■■■□□ 2.36
COL6A2-205ENST00000413758 RIMBP3Q9UFD9 1639 aa29.77■■■□□ 2.36
COL6A2-205ENST00000413758 SNAPC4Q5SXM2 1469 aa29.76■■■□□ 2.35
COL6A2-205ENST00000413758 CHMP7Q8WUX9 453 aaPredicted RBP29.71■■■□□ 2.35
COL6A2-205ENST00000413758 GRIN2BQ13224 1484 aa29.71■■■□□ 2.35
COL6A2-205ENST00000413758 ARHGEF11O15085 1522 aa29.7■■■□□ 2.34
COL6A2-205ENST00000413758 MAGI1Q96QZ7 1491 aaPredicted RBP29.67■■■□□ 2.34
COL6A2-205ENST00000413758 GAPVD1Q14C86 1478 aa29.66■■■□□ 2.34
COL6A2-205ENST00000413758 WRNQ14191 1432 aaPredicted RBP eCLIP29.63■■■□□ 2.33
COL6A2-205ENST00000413758 ABCA10Q8WWZ4 1543 aa29.63■■■□□ 2.33
COL6A2-205ENST00000413758 PBRM1Q86U86 1689 aa29.61■■■□□ 2.33
COL6A2-205ENST00000413758 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
COL6A2-205ENST00000413758 BIVM-ERCC5R4GMW8 1640 aa29.56■■■□□ 2.32
COL6A2-205ENST00000413758 SYNJ1O43426 1573 aa29.56■■■□□ 2.32
COL6A2-205ENST00000413758 SYNJ2O15056 1496 aa29.56■■■□□ 2.32
COL6A2-205ENST00000413758 CYB5RLQ6IPT4 315 aa29.55■■■□□ 2.32
COL6A2-205ENST00000413758 ABCA5Q8WWZ7 1642 aa29.55■■■□□ 2.32
COL6A2-205ENST00000413758 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.31
COL6A2-205ENST00000413758 ARAP1Q96P48 1450 aa29.42■■■□□ 2.3
COL6A2-205ENST00000413758 ADAMTS12P58397 1594 aa29.33■■■□□ 2.29
COL6A2-205ENST00000413758 GRIN2AQ12879 1464 aa29.32■■■□□ 2.28
COL6A2-205ENST00000413758 FHAD1B1AJZ9 1412 aa29.28■■■□□ 2.28
COL6A2-205ENST00000413758 ERICH3Q5RHP9 1530 aa29.27■■■□□ 2.28
COL6A2-205ENST00000413758 TRHP20396 242 aaPredicted RBP29.2■■■□□ 2.26
COL6A2-205ENST00000413758 CEP170Q5SW79 1584 aa29.18■■■□□ 2.26
COL6A2-205ENST00000413758 NUP160Q12769 1436 aa29.17■■■□□ 2.26
COL6A2-205ENST00000413758 KIF27Q86VH2 1401 aa29.07■■■□□ 2.24
COL6A2-205ENST00000413758 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
COL6A2-205ENST00000413758 SHROOM2Q13796 1616 aa28.99■■■□□ 2.23
COL6A2-205ENST00000413758 IGF1RP08069 1367 aa28.98■■■□□ 2.23
COL6A2-205ENST00000413758 JPH4Q96JJ6 628 aa28.96■■■□□ 2.23
COL6A2-205ENST00000413758 PRG4Q92954 1404 aaPredicted RBP28.94■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms