RNA–Protein interactions for RNA: ENST00000413748.6

SCG5-202, Transcript of secretogranin V, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCG5, Length 1,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG5-202ENST00000413748 NISCHQ9Y2I1 1504 aa25.09■■□□□ 1.61
SCG5-202ENST00000413748 ABCC9O60706 1549 aa22.9■■□□□ 1.26
SCG5-202ENST00000413748 CCDC180Q9P1Z9 1646 aa22.64■■□□□ 1.21
SCG5-202ENST00000413748 DNAJC5BQ9UF47 199 aa21.8■■□□□ 1.08
SCG5-202ENST00000413748 RB1CC1Q8TDY2 1594 aa21.65■■□□□ 1.06
SCG5-202ENST00000413748 NACADO15069 1562 aa21.44■■□□□ 1.02
SCG5-202ENST00000413748 UNC13AQ9UPW8 1703 aa21.27■■□□□ 1
SCG5-202ENST00000413748 PABPN1Q86U42 306 aaKnown RBP eCLIP21.26■□□□□ 0.99
SCG5-202ENST00000413748 DCAF8L2P0C7V8 631 aa21.17■□□□□ 0.98
SCG5-202ENST00000413748 BICRAQ9NZM4 1560 aa21.13■□□□□ 0.97
SCG5-202ENST00000413748 MYO15BQ96JP2 1530 aa21.06■□□□□ 0.96
SCG5-202ENST00000413748 ZCCHC6Q5VYS8 1495 aaKnown RBP20.74■□□□□ 0.91
SCG5-202ENST00000413748 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
SCG5-202ENST00000413748 CC2D2AQ9P2K1 1620 aa20.7■□□□□ 0.9
SCG5-202ENST00000413748 DCAF1Q9Y4B6 1507 aa20.69■□□□□ 0.9
SCG5-202ENST00000413748 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
SCG5-202ENST00000413748 SCRIBQ14160 1630 aa20.61■□□□□ 0.89
SCG5-202ENST00000413748 EIF4G1Q04637 1599 aaKnown RBP20.58■□□□□ 0.88
SCG5-202ENST00000413748 DNAJC5Q9H3Z4 198 aa20.14■□□□□ 0.81
SCG5-202ENST00000413748 CUX2O14529 1486 aa19.83■□□□□ 0.76
SCG5-202ENST00000413748 NCAPD3P42695 1498 aa19.81■□□□□ 0.76
SCG5-202ENST00000413748 ERCC6Q03468 1493 aa19.73■□□□□ 0.75
SCG5-202ENST00000413748 ATAD2BQ9ULI0 1458 aa19.72■□□□□ 0.75
SCG5-202ENST00000413748 HMGXB3Q12766 1538 aa19.64■□□□□ 0.73
SCG5-202ENST00000413748 NESP48681 1621 aa19.64■□□□□ 0.73
SCG5-202ENST00000413748 SMARCA4P51532 1647 aa19.64■□□□□ 0.73
SCG5-202ENST00000413748 SMARCA2P51531 1590 aa19.61■□□□□ 0.73
SCG5-202ENST00000413748 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
SCG5-202ENST00000413748 BAZ1BQ9UIG0 1483 aaKnown RBP19.48■□□□□ 0.71
SCG5-202ENST00000413748 PEG3Q9GZU2 1588 aa19.46■□□□□ 0.71
SCG5-202ENST00000413748 BAZ1AQ9NRL2 1556 aaPredicted RBP19.45■□□□□ 0.7
SCG5-202ENST00000413748 LAMC3Q9Y6N6 1575 aa19.4■□□□□ 0.7
SCG5-202ENST00000413748 KIF21AQ7Z4S6 1674 aa19.38■□□□□ 0.69
SCG5-202ENST00000413748 MROH2BQ7Z745 1585 aa19.36■□□□□ 0.69
SCG5-202ENST00000413748 PDS5BQ9NTI5 1447 aa19.25■□□□□ 0.67
SCG5-202ENST00000413748 CADPSQ9ULU8 1353 aa19.17■□□□□ 0.66
SCG5-202ENST00000413748 MRC2Q9UBG0 1479 aa19.14■□□□□ 0.65
SCG5-202ENST00000413748 WDR62O43379 1518 aa19.14■□□□□ 0.65
SCG5-202ENST00000413748 WIZO95785 1651 aa19.11■□□□□ 0.65
SCG5-202ENST00000413748 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
SCG5-202ENST00000413748 CEP164Q9UPV0 1460 aa18.99■□□□□ 0.63
SCG5-202ENST00000413748 FANCD2Q9BXW9 1451 aa18.97■□□□□ 0.63
SCG5-202ENST00000413748 CFTRP13569 1480 aa18.92■□□□□ 0.62
SCG5-202ENST00000413748 URB2Q14146 1524 aaKnown RBP18.87■□□□□ 0.61
SCG5-202ENST00000413748 RSF1Q96T23 1441 aaPredicted RBP18.83■□□□□ 0.6
SCG5-202ENST00000413748 OSCARQ8IYS5 282 aa18.82■□□□□ 0.6
SCG5-202ENST00000413748 TOP2AP11388 1531 aaKnown RBP18.81■□□□□ 0.6
SCG5-202ENST00000413748 PRDM2Q13029 1718 aa18.73■□□□□ 0.59
SCG5-202ENST00000413748 RIMBP3CA6NJZ7 1639 aa18.71■□□□□ 0.59
SCG5-202ENST00000413748 RIMBP3BA6NNM3 1639 aa18.71■□□□□ 0.59
SCG5-202ENST00000413748 RIMBP3Q9UFD9 1639 aa18.71■□□□□ 0.59
SCG5-202ENST00000413748 ZNF608Q9ULD9 1512 aaPredicted RBP18.69■□□□□ 0.58
SCG5-202ENST00000413748 IFT140Q96RY7 1462 aa18.62■□□□□ 0.57
SCG5-202ENST00000413748 CCDC88BA6NC98 1476 aa18.61■□□□□ 0.57
SCG5-202ENST00000413748 ARHGEF11O15085 1522 aa18.6■□□□□ 0.57
SCG5-202ENST00000413748 TOPBP1Q92547 1522 aa18.59■□□□□ 0.57
SCG5-202ENST00000413748 EIF4G3O43432 1585 aaKnown RBP18.56■□□□□ 0.56
SCG5-202ENST00000413748 DNMBPQ6XZF7 1577 aa18.5■□□□□ 0.55
SCG5-202ENST00000413748 TARBP1Q13395 1621 aaKnown RBP18.49■□□□□ 0.55
SCG5-202ENST00000413748 CHD1O14646 1710 aa18.49■□□□□ 0.55
SCG5-202ENST00000413748 AQRO60306 1485 aaKnown RBP eCLIP18.46■□□□□ 0.54
SCG5-202ENST00000413748 ABCC8Q09428 1581 aa18.45■□□□□ 0.54
SCG5-202ENST00000413748 ARAP1Q96P48 1450 aa18.42■□□□□ 0.54
SCG5-202ENST00000413748 CYB5RLQ6IPT4 315 aa18.42■□□□□ 0.54
SCG5-202ENST00000413748 POLA1P09884 1462 aaPredicted RBP18.39■□□□□ 0.53
SCG5-202ENST00000413748 RAD54L2Q9Y4B4 1467 aa18.33■□□□□ 0.53
SCG5-202ENST00000413748 FBLN2P98095 1184 aa18.29■□□□□ 0.52
SCG5-202ENST00000413748 TDRD9Q8NDG6 1382 aaKnown RBP18.28■□□□□ 0.52
SCG5-202ENST00000413748 CLASP1Q7Z460 1538 aa18.28■□□□□ 0.52
SCG5-202ENST00000413748 SOGA1O94964 1423 aa18.25■□□□□ 0.51
SCG5-202ENST00000413748 TRHP20396 242 aaPredicted RBP18.25■□□□□ 0.51
SCG5-202ENST00000413748 SNAPC4Q5SXM2 1469 aa18.25■□□□□ 0.51
SCG5-202ENST00000413748 FGD5Q6ZNL6 1462 aa18.22■□□□□ 0.51
SCG5-202ENST00000413748 WDR97A6NE52 1622 aa18.21■□□□□ 0.51
SCG5-202ENST00000413748 CUX1P39880 1505 aa18.19■□□□□ 0.5
SCG5-202ENST00000413748 MAGI1Q96QZ7 1491 aaPredicted RBP18.16■□□□□ 0.5
SCG5-202ENST00000413748 SYNJ1O43426 1573 aa18.16■□□□□ 0.5
SCG5-202ENST00000413748 GRIN2BQ13224 1484 aa18.13■□□□□ 0.49
SCG5-202ENST00000413748 SYNJ2O15056 1496 aa18.12■□□□□ 0.49
SCG5-202ENST00000413748 CHMP7Q8WUX9 453 aaPredicted RBP18.11■□□□□ 0.49
SCG5-202ENST00000413748 PBRM1Q86U86 1689 aa18.1■□□□□ 0.49
SCG5-202ENST00000413748 GAPVD1Q14C86 1478 aa18.04■□□□□ 0.48
SCG5-202ENST00000413748 ABCA5Q8WWZ7 1642 aa18.04■□□□□ 0.48
SCG5-202ENST00000413748 ERCC6L2Q5T890 1561 aa18■□□□□ 0.47
SCG5-202ENST00000413748 ABCA10Q8WWZ4 1543 aa18■□□□□ 0.47
SCG5-202ENST00000413748 GRIN2AQ12879 1464 aa17.93■□□□□ 0.46
SCG5-202ENST00000413748 CEP170Q5SW79 1584 aa17.91■□□□□ 0.46
SCG5-202ENST00000413748 ADAMTS12P58397 1594 aa17.91■□□□□ 0.46
SCG5-202ENST00000413748 AEBP2Q6ZN18 517 aaPredicted RBP17.89■□□□□ 0.45
SCG5-202ENST00000413748 NUP160Q12769 1436 aa17.89■□□□□ 0.45
SCG5-202ENST00000413748 SHROOM2Q13796 1616 aa17.87■□□□□ 0.45
SCG5-202ENST00000413748 WRNQ14191 1432 aaPredicted RBP eCLIP17.82■□□□□ 0.44
SCG5-202ENST00000413748 BIVM-ERCC5R4GMW8 1640 aa17.82■□□□□ 0.44
SCG5-202ENST00000413748 KIF13AQ9H1H9 1805 aa17.81■□□□□ 0.44
SCG5-202ENST00000413748 TOP2BQ02880 1626 aa17.8■□□□□ 0.44
SCG5-202ENST00000413748 FHAD1B1AJZ9 1412 aa17.78■□□□□ 0.44
SCG5-202ENST00000413748 ERICH3Q5RHP9 1530 aa17.75■□□□□ 0.43
SCG5-202ENST00000413748 PRG4Q92954 1404 aaPredicted RBP17.71■□□□□ 0.43
SCG5-202ENST00000413748 SUPT5HO00267 1087 aaKnown RBP17.68■□□□□ 0.42
SCG5-202ENST00000413748 RUSC2Q8N2Y8 1516 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms