RNA–Protein interactions for RNA: ENST00000413303.5

LTBP1-205, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

TSL 3

Gene LTBP1, Length 713 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-205ENST00000413303 NISCHQ9Y2I1 1504 aa29.55■■■□□ 2.32
LTBP1-205ENST00000413303 CCDC180Q9P1Z9 1646 aa26.32■■□□□ 1.8
LTBP1-205ENST00000413303 ABCC9O60706 1549 aa25.36■■□□□ 1.65
LTBP1-205ENST00000413303 ZCCHC6Q5VYS8 1495 aaKnown RBP24.68■■□□□ 1.54
LTBP1-205ENST00000413303 NACADO15069 1562 aa24.6■■□□□ 1.53
LTBP1-205ENST00000413303 RB1CC1Q8TDY2 1594 aa24.59■■□□□ 1.53
LTBP1-205ENST00000413303 MYO15BQ96JP2 1530 aa24.52■■□□□ 1.52
LTBP1-205ENST00000413303 DCAF1Q9Y4B6 1507 aa24.51■■□□□ 1.51
LTBP1-205ENST00000413303 DCAF8L2P0C7V8 631 aa24.46■■□□□ 1.51
LTBP1-205ENST00000413303 UNC13AQ9UPW8 1703 aa24.15■■□□□ 1.46
LTBP1-205ENST00000413303 SCRIBQ14160 1630 aa23.94■■□□□ 1.42
LTBP1-205ENST00000413303 BICRAQ9NZM4 1560 aa23.81■■□□□ 1.4
LTBP1-205ENST00000413303 PABPN1Q86U42 306 aaKnown RBP eCLIP23.65■■□□□ 1.38
LTBP1-205ENST00000413303 SHROOM4Q9ULL8 1493 aa23.62■■□□□ 1.37
LTBP1-205ENST00000413303 DNAJC5BQ9UF47 199 aa23.53■■□□□ 1.36
LTBP1-205ENST00000413303 EIF4G1Q04637 1599 aaKnown RBP23.16■■□□□ 1.3
LTBP1-205ENST00000413303 CC2D2AQ9P2K1 1620 aa23.02■■□□□ 1.28
LTBP1-205ENST00000413303 SMARCA4P51532 1647 aa22.94■■□□□ 1.26
LTBP1-205ENST00000413303 CECR2Q9BXF3 1484 aa22.94■■□□□ 1.26
LTBP1-205ENST00000413303 BAZ1AQ9NRL2 1556 aaPredicted RBP22.93■■□□□ 1.26
LTBP1-205ENST00000413303 MROH2BQ7Z745 1585 aa22.76■■□□□ 1.23
LTBP1-205ENST00000413303 SMARCA2P51531 1590 aa22.73■■□□□ 1.23
LTBP1-205ENST00000413303 PEG3Q9GZU2 1588 aa22.71■■□□□ 1.23
LTBP1-205ENST00000413303 ATAD2BQ9ULI0 1458 aa22.68■■□□□ 1.22
LTBP1-205ENST00000413303 NCAPD3P42695 1498 aa22.63■■□□□ 1.21
LTBP1-205ENST00000413303 HMGXB3Q12766 1538 aa22.62■■□□□ 1.21
LTBP1-205ENST00000413303 WIZO95785 1651 aa22.58■■□□□ 1.21
LTBP1-205ENST00000413303 RSF1Q96T23 1441 aaPredicted RBP22.55■■□□□ 1.2
LTBP1-205ENST00000413303 BAZ1BQ9UIG0 1483 aaKnown RBP22.53■■□□□ 1.2
LTBP1-205ENST00000413303 TOP2AP11388 1531 aaKnown RBP22.36■■□□□ 1.17
LTBP1-205ENST00000413303 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
LTBP1-205ENST00000413303 LAMC3Q9Y6N6 1575 aa22.08■■□□□ 1.12
LTBP1-205ENST00000413303 CCDC88BA6NC98 1476 aa22.03■■□□□ 1.12
LTBP1-205ENST00000413303 NESP48681 1621 aa22.01■■□□□ 1.11
LTBP1-205ENST00000413303 PRDM2Q13029 1718 aa22■■□□□ 1.11
LTBP1-205ENST00000413303 CADPSQ9ULU8 1353 aa21.96■■□□□ 1.11
LTBP1-205ENST00000413303 CFTRP13569 1480 aa21.91■■□□□ 1.1
LTBP1-205ENST00000413303 KIF21AQ7Z4S6 1674 aa21.9■■□□□ 1.1
LTBP1-205ENST00000413303 ERCC6Q03468 1493 aa21.87■■□□□ 1.09
LTBP1-205ENST00000413303 DNAJC5Q9H3Z4 198 aa21.86■■□□□ 1.09
LTBP1-205ENST00000413303 PDS5BQ9NTI5 1447 aa21.84■■□□□ 1.09
LTBP1-205ENST00000413303 FANCD2Q9BXW9 1451 aa21.74■■□□□ 1.07
LTBP1-205ENST00000413303 THOC2Q8NI27 1593 aaKnown RBP21.74■■□□□ 1.07
LTBP1-205ENST00000413303 CEP164Q9UPV0 1460 aa21.72■■□□□ 1.07
LTBP1-205ENST00000413303 MRC2Q9UBG0 1479 aa21.64■■□□□ 1.05
LTBP1-205ENST00000413303 WDR62O43379 1518 aa21.59■■□□□ 1.05
LTBP1-205ENST00000413303 CUX2O14529 1486 aa21.58■■□□□ 1.05
LTBP1-205ENST00000413303 URB2Q14146 1524 aaKnown RBP21.51■■□□□ 1.03
LTBP1-205ENST00000413303 DNMBPQ6XZF7 1577 aa21.48■■□□□ 1.03
LTBP1-205ENST00000413303 ABCC8Q09428 1581 aa21.47■■□□□ 1.03
LTBP1-205ENST00000413303 TOPBP1Q92547 1522 aa21.44■■□□□ 1.02
LTBP1-205ENST00000413303 CUX1P39880 1505 aa21.35■■□□□ 1.01
LTBP1-205ENST00000413303 BIVM-ERCC5R4GMW8 1640 aa21.32■■□□□ 1
LTBP1-205ENST00000413303 TOP2BQ02880 1626 aa21.28■■□□□ 1
LTBP1-205ENST00000413303 WRNQ14191 1432 aaPredicted RBP eCLIP21.28■■□□□ 1
LTBP1-205ENST00000413303 POLA1P09884 1462 aaPredicted RBP21.26■□□□□ 0.99
LTBP1-205ENST00000413303 SYNJ1O43426 1573 aa21.26■□□□□ 0.99
LTBP1-205ENST00000413303 FGD5Q6ZNL6 1462 aa21.25■□□□□ 0.99
LTBP1-205ENST00000413303 IFT140Q96RY7 1462 aa21.25■□□□□ 0.99
LTBP1-205ENST00000413303 TARBP1Q13395 1621 aaKnown RBP21.23■□□□□ 0.99
LTBP1-205ENST00000413303 WDR97A6NE52 1622 aa21.18■□□□□ 0.98
LTBP1-205ENST00000413303 SOGA1O94964 1423 aa21.13■□□□□ 0.97
LTBP1-205ENST00000413303 RAD54L2Q9Y4B4 1467 aa21.13■□□□□ 0.97
LTBP1-205ENST00000413303 EIF4G3O43432 1585 aaKnown RBP21.12■□□□□ 0.97
LTBP1-205ENST00000413303 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
LTBP1-205ENST00000413303 ABCA10Q8WWZ4 1543 aa21.06■□□□□ 0.96
LTBP1-205ENST00000413303 ABCA5Q8WWZ7 1642 aa21.02■□□□□ 0.96
LTBP1-205ENST00000413303 PBRM1Q86U86 1689 aa21.02■□□□□ 0.95
LTBP1-205ENST00000413303 AQRO60306 1485 aaKnown RBP eCLIP20.98■□□□□ 0.95
LTBP1-205ENST00000413303 TDRD9Q8NDG6 1382 aaKnown RBP20.96■□□□□ 0.95
LTBP1-205ENST00000413303 GAPVD1Q14C86 1478 aa20.94■□□□□ 0.94
LTBP1-205ENST00000413303 GRIN2BQ13224 1484 aa20.9■□□□□ 0.94
LTBP1-205ENST00000413303 CHD1O14646 1710 aa20.87■□□□□ 0.93
LTBP1-205ENST00000413303 TRIM41Q8WV44 630 aa20.86■□□□□ 0.93
LTBP1-205ENST00000413303 MAGI1Q96QZ7 1491 aaPredicted RBP20.85■□□□□ 0.93
LTBP1-205ENST00000413303 SNAPC4Q5SXM2 1469 aa20.84■□□□□ 0.93
LTBP1-205ENST00000413303 ERICH3Q5RHP9 1530 aa20.83■□□□□ 0.93
LTBP1-205ENST00000413303 KIF27Q86VH2 1401 aa20.82■□□□□ 0.92
LTBP1-205ENST00000413303 ADAMTS12P58397 1594 aa20.79■□□□□ 0.92
LTBP1-205ENST00000413303 CUL7Q14999 1698 aa20.75■□□□□ 0.91
LTBP1-205ENST00000413303 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
LTBP1-205ENST00000413303 CHIC1Q5VXU3 224 aa20.74■□□□□ 0.91
LTBP1-205ENST00000413303 FHAD1B1AJZ9 1412 aa20.7■□□□□ 0.9
LTBP1-205ENST00000413303 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
LTBP1-205ENST00000413303 IGF1RP08069 1367 aa20.65■□□□□ 0.9
LTBP1-205ENST00000413303 FBLN2P98095 1184 aa20.65■□□□□ 0.9
LTBP1-205ENST00000413303 GRIN2AQ12879 1464 aa20.64■□□□□ 0.89
LTBP1-205ENST00000413303 CHMP7Q8WUX9 453 aaPredicted RBP20.64■□□□□ 0.89
LTBP1-205ENST00000413303 OSCARQ8IYS5 282 aa20.63■□□□□ 0.89
LTBP1-205ENST00000413303 EEA1Q15075 1411 aa20.6■□□□□ 0.89
LTBP1-205ENST00000413303 CLASP1Q7Z460 1538 aa20.56■□□□□ 0.88
LTBP1-205ENST00000413303 CARMIL1Q5VZK9 1371 aa20.56■□□□□ 0.88
LTBP1-205ENST00000413303 CEP170Q5SW79 1584 aa20.55■□□□□ 0.88
LTBP1-205ENST00000413303 NUP160Q12769 1436 aa20.53■□□□□ 0.88
LTBP1-205ENST00000413303 RAPGEF2Q9Y4G8 1499 aa20.5■□□□□ 0.87
LTBP1-205ENST00000413303 PRXQ9BXM0 1461 aa20.47■□□□□ 0.87
LTBP1-205ENST00000413303 CTTNBP2Q8WZ74 1663 aa20.46■□□□□ 0.87
LTBP1-205ENST00000413303 CSRNP3Q8WYN3 585 aa20.44■□□□□ 0.86
LTBP1-205ENST00000413303 SHROOM2Q13796 1616 aa20.43■□□□□ 0.86
LTBP1-205ENST00000413303 KIF21BO75037 1637 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms