RNA–Protein interactions for RNA: ENST00000413013.6

SMIM29-203, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-203ENST00000413013 NISCHQ9Y2I1 1504 aa44.16■■■■■ 4.66
SMIM29-203ENST00000413013 ABCC9O60706 1549 aa39.9■■■■□ 3.98
SMIM29-203ENST00000413013 CCDC180Q9P1Z9 1646 aa39.83■■■■□ 3.97
SMIM29-203ENST00000413013 RB1CC1Q8TDY2 1594 aa37.98■■■■□ 3.67
SMIM29-203ENST00000413013 NACADO15069 1562 aa37.65■■■■□ 3.62
SMIM29-203ENST00000413013 DNAJC5BQ9UF47 199 aa37.42■■■■□ 3.58
SMIM29-203ENST00000413013 DCAF8L2P0C7V8 631 aa37.3■■■■□ 3.56
SMIM29-203ENST00000413013 UNC13AQ9UPW8 1703 aa37.07■■■■□ 3.52
SMIM29-203ENST00000413013 MYO15BQ96JP2 1530 aa37.06■■■■□ 3.52
SMIM29-203ENST00000413013 PABPN1Q86U42 306 aaKnown RBP eCLIP37.03■■■■□ 3.52
SMIM29-203ENST00000413013 BICRAQ9NZM4 1560 aa36.77■■■■□ 3.48
SMIM29-203ENST00000413013 ZCCHC6Q5VYS8 1495 aaKnown RBP36.59■■■■□ 3.45
SMIM29-203ENST00000413013 DCAF1Q9Y4B6 1507 aa36.5■■■■□ 3.43
SMIM29-203ENST00000413013 SHROOM4Q9ULL8 1493 aa36.42■■■■□ 3.42
SMIM29-203ENST00000413013 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
SMIM29-203ENST00000413013 CC2D2AQ9P2K1 1620 aa36.06■■■■□ 3.36
SMIM29-203ENST00000413013 CECR2Q9BXF3 1484 aa35.99■■■■□ 3.35
SMIM29-203ENST00000413013 EIF4G1Q04637 1599 aaKnown RBP35.94■■■■□ 3.34
SMIM29-203ENST00000413013 NCAPD3P42695 1498 aa34.69■■■■□ 3.14
SMIM29-203ENST00000413013 DNAJC5Q9H3Z4 198 aa34.6■■■■□ 3.13
SMIM29-203ENST00000413013 ATAD2BQ9ULI0 1458 aa34.56■■■■□ 3.12
SMIM29-203ENST00000413013 CUX2O14529 1486 aa34.55■■■■□ 3.12
SMIM29-203ENST00000413013 ERCC6Q03468 1493 aa34.55■■■■□ 3.12
SMIM29-203ENST00000413013 SMARCA2P51531 1590 aa34.54■■■■□ 3.12
SMIM29-203ENST00000413013 SMARCA4P51532 1647 aa34.53■■■■□ 3.12
SMIM29-203ENST00000413013 HMGXB3Q12766 1538 aa34.5■■■■□ 3.11
SMIM29-203ENST00000413013 BAZ1AQ9NRL2 1556 aaPredicted RBP34.36■■■■□ 3.09
SMIM29-203ENST00000413013 BAZ1BQ9UIG0 1483 aaKnown RBP34.28■■■■□ 3.08
SMIM29-203ENST00000413013 PEG3Q9GZU2 1588 aa34.19■■■■□ 3.06
SMIM29-203ENST00000413013 NESP48681 1621 aa34.19■■■■□ 3.06
SMIM29-203ENST00000413013 LAMC3Q9Y6N6 1575 aa34.02■■■■□ 3.04
SMIM29-203ENST00000413013 MROH2BQ7Z745 1585 aa33.99■■■■□ 3.03
SMIM29-203ENST00000413013 THOC2Q8NI27 1593 aaKnown RBP33.97■■■■□ 3.03
SMIM29-203ENST00000413013 KIF21AQ7Z4S6 1674 aa33.82■■■■□ 3
SMIM29-203ENST00000413013 PDS5BQ9NTI5 1447 aa33.81■■■■□ 3
SMIM29-203ENST00000413013 CADPSQ9ULU8 1353 aa33.63■■■□□ 2.97
SMIM29-203ENST00000413013 WIZO95785 1651 aa33.6■■■□□ 2.97
SMIM29-203ENST00000413013 MRC2Q9UBG0 1479 aa33.54■■■□□ 2.96
SMIM29-203ENST00000413013 WDR62O43379 1518 aa33.46■■■□□ 2.95
SMIM29-203ENST00000413013 CEP164Q9UPV0 1460 aa33.38■■■□□ 2.93
SMIM29-203ENST00000413013 FANCD2Q9BXW9 1451 aa33.29■■■□□ 2.92
SMIM29-203ENST00000413013 TOP2AP11388 1531 aaKnown RBP33.23■■■□□ 2.91
SMIM29-203ENST00000413013 CFTRP13569 1480 aa33.22■■■□□ 2.91
SMIM29-203ENST00000413013 RSF1Q96T23 1441 aaPredicted RBP33.2■■■□□ 2.91
SMIM29-203ENST00000413013 TRIM41Q8WV44 630 aa33.05■■■□□ 2.88
SMIM29-203ENST00000413013 PRDM2Q13029 1718 aa32.99■■■□□ 2.87
SMIM29-203ENST00000413013 URB2Q14146 1524 aaKnown RBP32.99■■■□□ 2.87
SMIM29-203ENST00000413013 OSCARQ8IYS5 282 aa32.84■■■□□ 2.85
SMIM29-203ENST00000413013 CCDC88BA6NC98 1476 aa32.76■■■□□ 2.84
SMIM29-203ENST00000413013 IFT140Q96RY7 1462 aa32.71■■■□□ 2.83
SMIM29-203ENST00000413013 TOPBP1Q92547 1522 aa32.62■■■□□ 2.81
SMIM29-203ENST00000413013 ABCC8Q09428 1581 aa32.6■■■□□ 2.81
SMIM29-203ENST00000413013 ZNF608Q9ULD9 1512 aaPredicted RBP32.6■■■□□ 2.81
SMIM29-203ENST00000413013 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
SMIM29-203ENST00000413013 EIF4G3O43432 1585 aaKnown RBP32.51■■■□□ 2.79
SMIM29-203ENST00000413013 RIMBP3CA6NJZ7 1639 aa32.5■■■□□ 2.79
SMIM29-203ENST00000413013 RIMBP3BA6NNM3 1639 aa32.5■■■□□ 2.79
SMIM29-203ENST00000413013 RIMBP3Q9UFD9 1639 aa32.5■■■□□ 2.79
SMIM29-203ENST00000413013 ARHGEF11O15085 1522 aa32.37■■■□□ 2.77
SMIM29-203ENST00000413013 TARBP1Q13395 1621 aaKnown RBP32.34■■■□□ 2.77
SMIM29-203ENST00000413013 CHD1O14646 1710 aa32.29■■■□□ 2.76
SMIM29-203ENST00000413013 POLA1P09884 1462 aaPredicted RBP32.28■■■□□ 2.76
SMIM29-203ENST00000413013 AQRO60306 1485 aaKnown RBP eCLIP32.27■■■□□ 2.762e-7■■■■■ 56.2
SMIM29-203ENST00000413013 FBLN2P98095 1184 aa32.13■■■□□ 2.73
SMIM29-203ENST00000413013 WDR97A6NE52 1622 aa32.12■■■□□ 2.73
SMIM29-203ENST00000413013 RAD54L2Q9Y4B4 1467 aa32.11■■■□□ 2.73
SMIM29-203ENST00000413013 SOGA1O94964 1423 aa32.1■■■□□ 2.73
SMIM29-203ENST00000413013 CYB5RLQ6IPT4 315 aa32.06■■■□□ 2.72
SMIM29-203ENST00000413013 FGD5Q6ZNL6 1462 aa32.05■■■□□ 2.72
SMIM29-203ENST00000413013 TDRD9Q8NDG6 1382 aaKnown RBP32.03■■■□□ 2.72
SMIM29-203ENST00000413013 ARAP1Q96P48 1450 aa32.02■■■□□ 2.72
SMIM29-203ENST00000413013 SNAPC4Q5SXM2 1469 aa32.01■■■□□ 2.71
SMIM29-203ENST00000413013 CUX1P39880 1505 aa31.97■■■□□ 2.71
SMIM29-203ENST00000413013 MAGI1Q96QZ7 1491 aaPredicted RBP31.95■■■□□ 2.7
SMIM29-203ENST00000413013 SYNJ1O43426 1573 aa31.92■■■□□ 2.7
SMIM29-203ENST00000413013 GRIN2BQ13224 1484 aa31.9■■■□□ 2.7
SMIM29-203ENST00000413013 CLASP1Q7Z460 1538 aa31.9■■■□□ 2.7
SMIM29-203ENST00000413013 CHMP7Q8WUX9 453 aaPredicted RBP31.87■■■□□ 2.69
SMIM29-203ENST00000413013 TRHP20396 242 aaPredicted RBP31.82■■■□□ 2.68
SMIM29-203ENST00000413013 SYNJ2O15056 1496 aa31.82■■■□□ 2.68
SMIM29-203ENST00000413013 PBRM1Q86U86 1689 aa31.81■■■□□ 2.68
SMIM29-203ENST00000413013 GAPVD1Q14C86 1478 aa31.74■■■□□ 2.67
SMIM29-203ENST00000413013 ABCA10Q8WWZ4 1543 aa31.69■■■□□ 2.66
SMIM29-203ENST00000413013 ABCA5Q8WWZ7 1642 aa31.68■■■□□ 2.66
SMIM29-203ENST00000413013 SUPT5HO00267 1087 aaKnown RBP31.57■■■□□ 2.64
SMIM29-203ENST00000413013 WRNQ14191 1432 aaPredicted RBP eCLIP31.53■■■□□ 2.64
SMIM29-203ENST00000413013 ADAMTS12P58397 1594 aa31.48■■■□□ 2.63
SMIM29-203ENST00000413013 GRIN2AQ12879 1464 aa31.48■■■□□ 2.63
SMIM29-203ENST00000413013 BIVM-ERCC5R4GMW8 1640 aa31.47■■■□□ 2.63
SMIM29-203ENST00000413013 TOP2BQ02880 1626 aa31.46■■■□□ 2.63
SMIM29-203ENST00000413013 CEP170Q5SW79 1584 aa31.37■■■□□ 2.61
SMIM29-203ENST00000413013 NUP160Q12769 1436 aa31.36■■■□□ 2.61
SMIM29-203ENST00000413013 FHAD1B1AJZ9 1412 aa31.34■■■□□ 2.61
SMIM29-203ENST00000413013 ERICH3Q5RHP9 1530 aa31.32■■■□□ 2.6
SMIM29-203ENST00000413013 ERCC6L2Q5T890 1561 aa31.31■■■□□ 2.6
SMIM29-203ENST00000413013 SHROOM2Q13796 1616 aa31.27■■■□□ 2.6
SMIM29-203ENST00000413013 AEBP2Q6ZN18 517 aaPredicted RBP31.09■■■□□ 2.57
SMIM29-203ENST00000413013 PRG4Q92954 1404 aaPredicted RBP31.07■■■□□ 2.57
SMIM29-203ENST00000413013 RUSC2Q8N2Y8 1516 aa31.04■■■□□ 2.56
SMIM29-203ENST00000413013 JPH4Q96JJ6 628 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 153.3 ms