RNA–Protein interactions for RNA: ENST00000412966.5

RAB5A-202, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5A, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-202ENST00000412966 NISCHQ9Y2I1 1504 aa34.83■■■■□ 3.17
RAB5A-202ENST00000412966 ABCC9O60706 1549 aa31.49■■■□□ 2.63
RAB5A-202ENST00000412966 CCDC180Q9P1Z9 1646 aa31.35■■■□□ 2.61
RAB5A-202ENST00000412966 RB1CC1Q8TDY2 1594 aa29.9■■■□□ 2.38
RAB5A-202ENST00000412966 DNAJC5BQ9UF47 199 aa29.74■■■□□ 2.35
RAB5A-202ENST00000412966 NACADO15069 1562 aa29.64■■■□□ 2.34
RAB5A-202ENST00000412966 DCAF8L2P0C7V8 631 aa29.39■■■□□ 2.3
RAB5A-202ENST00000412966 UNC13AQ9UPW8 1703 aa29.31■■■□□ 2.28
RAB5A-202ENST00000412966 PABPN1Q86U42 306 aaKnown RBP eCLIP29.28■■■□□ 2.28
RAB5A-202ENST00000412966 MYO15BQ96JP2 1530 aa29.19■■■□□ 2.26
RAB5A-202ENST00000412966 BICRAQ9NZM4 1560 aa29.09■■■□□ 2.25
RAB5A-202ENST00000412966 ZCCHC6Q5VYS8 1495 aaKnown RBP28.84■■■□□ 2.21
RAB5A-202ENST00000412966 DCAF1Q9Y4B6 1507 aa28.75■■■□□ 2.19
RAB5A-202ENST00000412966 SHROOM4Q9ULL8 1493 aa28.61■■■□□ 2.17
RAB5A-202ENST00000412966 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
RAB5A-202ENST00000412966 CC2D2AQ9P2K1 1620 aa28.47■■■□□ 2.15
RAB5A-202ENST00000412966 CECR2Q9BXF3 1484 aa28.38■■■□□ 2.13
RAB5A-202ENST00000412966 EIF4G1Q04637 1599 aaKnown RBP28.36■■■□□ 2.13
RAB5A-202ENST00000412966 DNAJC5Q9H3Z4 198 aa27.39■■□□□ 1.98
RAB5A-202ENST00000412966 NCAPD3P42695 1498 aa27.38■■□□□ 1.97
RAB5A-202ENST00000412966 ATAD2BQ9ULI0 1458 aa27.27■■□□□ 1.96
RAB5A-202ENST00000412966 SMARCA4P51532 1647 aa27.22■■□□□ 1.95
RAB5A-202ENST00000412966 CUX2O14529 1486 aa27.21■■□□□ 1.95
RAB5A-202ENST00000412966 HMGXB3Q12766 1538 aa27.17■■□□□ 1.94
RAB5A-202ENST00000412966 ERCC6Q03468 1493 aa27.17■■□□□ 1.94
RAB5A-202ENST00000412966 SMARCA2P51531 1590 aa27.17■■□□□ 1.94
RAB5A-202ENST00000412966 NESP48681 1621 aa27.04■■□□□ 1.92
RAB5A-202ENST00000412966 BAZ1AQ9NRL2 1556 aaPredicted RBP27.03■■□□□ 1.92
RAB5A-202ENST00000412966 BAZ1BQ9UIG0 1483 aaKnown RBP26.98■■□□□ 1.91
RAB5A-202ENST00000412966 PEG3Q9GZU2 1588 aa26.96■■□□□ 1.91
RAB5A-202ENST00000412966 MROH2BQ7Z745 1585 aa26.85■■□□□ 1.89
RAB5A-202ENST00000412966 THOC2Q8NI27 1593 aaKnown RBP26.81■■□□□ 1.88
RAB5A-202ENST00000412966 LAMC3Q9Y6N6 1575 aa26.8■■□□□ 1.88
RAB5A-202ENST00000412966 KIF21AQ7Z4S6 1674 aa26.7■■□□□ 1.87
RAB5A-202ENST00000412966 PDS5BQ9NTI5 1447 aa26.61■■□□□ 1.85
RAB5A-202ENST00000412966 WIZO95785 1651 aa26.53■■□□□ 1.84
RAB5A-202ENST00000412966 CADPSQ9ULU8 1353 aa26.52■■□□□ 1.84
RAB5A-202ENST00000412966 MRC2Q9UBG0 1479 aa26.42■■□□□ 1.82
RAB5A-202ENST00000412966 WDR62O43379 1518 aa26.38■■□□□ 1.81
RAB5A-202ENST00000412966 CEP164Q9UPV0 1460 aa26.27■■□□□ 1.8
RAB5A-202ENST00000412966 FANCD2Q9BXW9 1451 aa26.23■■□□□ 1.79
RAB5A-202ENST00000412966 RSF1Q96T23 1441 aaPredicted RBP26.21■■□□□ 1.79
RAB5A-202ENST00000412966 CFTRP13569 1480 aa26.2■■□□□ 1.78
RAB5A-202ENST00000412966 TOP2AP11388 1531 aaKnown RBP26.15■■□□□ 1.78
RAB5A-202ENST00000412966 TRIM41Q8WV44 630 aa26.09■■□□□ 1.77
RAB5A-202ENST00000412966 URB2Q14146 1524 aaKnown RBP26.06■■□□□ 1.76
RAB5A-202ENST00000412966 PRDM2Q13029 1718 aa25.97■■□□□ 1.75
RAB5A-202ENST00000412966 OSCARQ8IYS5 282 aa25.9■■□□□ 1.74
RAB5A-202ENST00000412966 CCDC88BA6NC98 1476 aa25.85■■□□□ 1.73
RAB5A-202ENST00000412966 ZNF608Q9ULD9 1512 aaPredicted RBP25.76■■□□□ 1.71
RAB5A-202ENST00000412966 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
RAB5A-202ENST00000412966 TOPBP1Q92547 1522 aa25.73■■□□□ 1.71
RAB5A-202ENST00000412966 RIMBP3CA6NJZ7 1639 aa25.66■■□□□ 1.7
RAB5A-202ENST00000412966 RIMBP3BA6NNM3 1639 aa25.66■■□□□ 1.7
RAB5A-202ENST00000412966 RIMBP3Q9UFD9 1639 aa25.66■■□□□ 1.7
RAB5A-202ENST00000412966 DNMBPQ6XZF7 1577 aa25.62■■□□□ 1.69
RAB5A-202ENST00000412966 EIF4G3O43432 1585 aaKnown RBP25.61■■□□□ 1.69
RAB5A-202ENST00000412966 ABCC8Q09428 1581 aa25.61■■□□□ 1.69
RAB5A-202ENST00000412966 TARBP1Q13395 1621 aaKnown RBP25.55■■□□□ 1.68
RAB5A-202ENST00000412966 ARHGEF11O15085 1522 aa25.54■■□□□ 1.68
RAB5A-202ENST00000412966 AQRO60306 1485 aaKnown RBP eCLIP25.48■■□□□ 1.672e-6■■■□□ 15.4
RAB5A-202ENST00000412966 CHD1O14646 1710 aa25.48■■□□□ 1.67
RAB5A-202ENST00000412966 POLA1P09884 1462 aaPredicted RBP25.46■■□□□ 1.67
RAB5A-202ENST00000412966 RAD54L2Q9Y4B4 1467 aa25.37■■□□□ 1.65
RAB5A-202ENST00000412966 CYB5RLQ6IPT4 315 aa25.31■■□□□ 1.64
RAB5A-202ENST00000412966 SOGA1O94964 1423 aa25.3■■□□□ 1.64
RAB5A-202ENST00000412966 ARAP1Q96P48 1450 aa25.29■■□□□ 1.64
RAB5A-202ENST00000412966 FBLN2P98095 1184 aa25.29■■□□□ 1.64
RAB5A-202ENST00000412966 TDRD9Q8NDG6 1382 aaKnown RBP25.29■■□□□ 1.64
RAB5A-202ENST00000412966 FGD5Q6ZNL6 1462 aa25.27■■□□□ 1.64
RAB5A-202ENST00000412966 CUX1P39880 1505 aa25.24■■□□□ 1.63
RAB5A-202ENST00000412966 WDR97A6NE52 1622 aa25.23■■□□□ 1.63
RAB5A-202ENST00000412966 SNAPC4Q5SXM2 1469 aa25.22■■□□□ 1.63
RAB5A-202ENST00000412966 CLASP1Q7Z460 1538 aa25.17■■□□□ 1.62
RAB5A-202ENST00000412966 MAGI1Q96QZ7 1491 aaPredicted RBP25.14■■□□□ 1.61
RAB5A-202ENST00000412966 GRIN2BQ13224 1484 aa25.11■■□□□ 1.61
RAB5A-202ENST00000412966 SYNJ1O43426 1573 aa25.1■■□□□ 1.61
RAB5A-202ENST00000412966 CHMP7Q8WUX9 453 aaPredicted RBP25.08■■□□□ 1.61
RAB5A-202ENST00000412966 TRHP20396 242 aaPredicted RBP25.06■■□□□ 1.6
RAB5A-202ENST00000412966 PBRM1Q86U86 1689 aa25.06■■□□□ 1.6
RAB5A-202ENST00000412966 SYNJ2O15056 1496 aa25.05■■□□□ 1.6
RAB5A-202ENST00000412966 GAPVD1Q14C86 1478 aa25.01■■□□□ 1.59
RAB5A-202ENST00000412966 ABCA5Q8WWZ7 1642 aa24.97■■□□□ 1.59
RAB5A-202ENST00000412966 ABCA10Q8WWZ4 1543 aa24.97■■□□□ 1.59
RAB5A-202ENST00000412966 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
RAB5A-202ENST00000412966 GRIN2AQ12879 1464 aa24.8■■□□□ 1.56
RAB5A-202ENST00000412966 ADAMTS12P58397 1594 aa24.8■■□□□ 1.56
RAB5A-202ENST00000412966 BIVM-ERCC5R4GMW8 1640 aa24.79■■□□□ 1.56
RAB5A-202ENST00000412966 WRNQ14191 1432 aaPredicted RBP eCLIP24.79■■□□□ 1.56
RAB5A-202ENST00000412966 ERCC6L2Q5T890 1561 aa24.79■■□□□ 1.56
RAB5A-202ENST00000412966 TOP2BQ02880 1626 aa24.77■■□□□ 1.56
RAB5A-202ENST00000412966 CEP170Q5SW79 1584 aa24.76■■□□□ 1.55
RAB5A-202ENST00000412966 NUP160Q12769 1436 aa24.74■■□□□ 1.55
RAB5A-202ENST00000412966 FHAD1B1AJZ9 1412 aa24.68■■□□□ 1.54
RAB5A-202ENST00000412966 SHROOM2Q13796 1616 aa24.67■■□□□ 1.54
RAB5A-202ENST00000412966 ERICH3Q5RHP9 1530 aa24.65■■□□□ 1.54
RAB5A-202ENST00000412966 PRG4Q92954 1404 aaPredicted RBP24.49■■□□□ 1.51
RAB5A-202ENST00000412966 KIF13AQ9H1H9 1805 aa24.46■■□□□ 1.51
RAB5A-202ENST00000412966 RUSC2Q8N2Y8 1516 aa24.45■■□□□ 1.5
RAB5A-202ENST00000412966 AEBP2Q6ZN18 517 aaPredicted RBP24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms