RNA–Protein interactions for RNA: ENST00000412937.5

NR1H3-205, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 4

Gene NR1H3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-205ENST00000412937 NISCHQ9Y2I1 1504 aa39.68■■■■□ 3.94
NR1H3-205ENST00000412937 CCDC180Q9P1Z9 1646 aa35.36■■■■□ 3.25
NR1H3-205ENST00000412937 ABCC9O60706 1549 aa35.11■■■■□ 3.21
NR1H3-205ENST00000412937 RB1CC1Q8TDY2 1594 aa33.51■■■□□ 2.95
NR1H3-205ENST00000412937 DCAF8L2P0C7V8 631 aa33.5■■■□□ 2.95
NR1H3-205ENST00000412937 NACADO15069 1562 aa33.35■■■□□ 2.93
NR1H3-205ENST00000412937 MYO15BQ96JP2 1530 aa32.95■■■□□ 2.87
NR1H3-205ENST00000412937 ZCCHC6Q5VYS8 1495 aaKnown RBP32.94■■■□□ 2.86
NR1H3-205ENST00000412937 UNC13AQ9UPW8 1703 aa32.84■■■□□ 2.85
NR1H3-205ENST00000412937 PABPN1Q86U42 306 aaKnown RBP eCLIP32.83■■■□□ 2.85
NR1H3-205ENST00000412937 DCAF1Q9Y4B6 1507 aa32.71■■■□□ 2.83
NR1H3-205ENST00000412937 DNAJC5BQ9UF47 199 aa32.65■■■□□ 2.82
NR1H3-205ENST00000412937 BICRAQ9NZM4 1560 aa32.56■■■□□ 2.8
NR1H3-205ENST00000412937 SCRIBQ14160 1630 aa32.37■■■□□ 2.77
NR1H3-205ENST00000412937 SHROOM4Q9ULL8 1493 aa31.99■■■□□ 2.71
NR1H3-205ENST00000412937 EIF4G1Q04637 1599 aaKnown RBP31.71■■■□□ 2.67
NR1H3-205ENST00000412937 CC2D2AQ9P2K1 1620 aa31.71■■■□□ 2.67
NR1H3-205ENST00000412937 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
NR1H3-205ENST00000412937 SMARCA4P51532 1647 aa30.87■■■□□ 2.53
NR1H3-205ENST00000412937 NCAPD3P42695 1498 aa30.8■■■□□ 2.52
NR1H3-205ENST00000412937 ATAD2BQ9ULI0 1458 aa30.8■■■□□ 2.52
NR1H3-205ENST00000412937 BAZ1AQ9NRL2 1556 aaPredicted RBP30.74■■■□□ 2.51
NR1H3-205ENST00000412937 SMARCA2P51531 1590 aa30.69■■■□□ 2.5
NR1H3-205ENST00000412937 MROH2BQ7Z745 1585 aa30.62■■■□□ 2.49
NR1H3-205ENST00000412937 HMGXB3Q12766 1538 aa30.57■■■□□ 2.49
NR1H3-205ENST00000412937 BAZ1BQ9UIG0 1483 aaKnown RBP30.52■■■□□ 2.48
NR1H3-205ENST00000412937 PEG3Q9GZU2 1588 aa30.49■■■□□ 2.47
NR1H3-205ENST00000412937 WIZO95785 1651 aa30.31■■■□□ 2.44
NR1H3-205ENST00000412937 NESP48681 1621 aa30.3■■■□□ 2.44
NR1H3-205ENST00000412937 ERCC6Q03468 1493 aa30.25■■■□□ 2.43
NR1H3-205ENST00000412937 RSF1Q96T23 1441 aaPredicted RBP30.13■■■□□ 2.41
NR1H3-205ENST00000412937 LAMC3Q9Y6N6 1575 aa30.03■■■□□ 2.4
NR1H3-205ENST00000412937 CUX2O14529 1486 aa29.99■■■□□ 2.39
NR1H3-205ENST00000412937 CADPSQ9ULU8 1353 aa29.91■■■□□ 2.38
NR1H3-205ENST00000412937 KIF21AQ7Z4S6 1674 aa29.9■■■□□ 2.38
NR1H3-205ENST00000412937 TOP2AP11388 1531 aaKnown RBP29.87■■■□□ 2.37
NR1H3-205ENST00000412937 PDS5BQ9NTI5 1447 aa29.87■■■□□ 2.37
NR1H3-205ENST00000412937 THOC2Q8NI27 1593 aaKnown RBP29.82■■■□□ 2.36
NR1H3-205ENST00000412937 CFTRP13569 1480 aa29.64■■■□□ 2.34
NR1H3-205ENST00000412937 MRC2Q9UBG0 1479 aa29.6■■■□□ 2.33
NR1H3-205ENST00000412937 DNAJC5Q9H3Z4 198 aa29.59■■■□□ 2.33
NR1H3-205ENST00000412937 CCDC88BA6NC98 1476 aa29.59■■■□□ 2.33
NR1H3-205ENST00000412937 FANCD2Q9BXW9 1451 aa29.59■■■□□ 2.33
NR1H3-205ENST00000412937 CEP164Q9UPV0 1460 aa29.56■■■□□ 2.32
NR1H3-205ENST00000412937 WDR62O43379 1518 aa29.49■■■□□ 2.31
NR1H3-205ENST00000412937 PRDM2Q13029 1718 aa29.39■■■□□ 2.3
NR1H3-205ENST00000412937 URB2Q14146 1524 aaKnown RBP29.34■■■□□ 2.29
NR1H3-205ENST00000412937 SUPT5HO00267 1087 aaKnown RBP29.23■■■□□ 2.27
NR1H3-205ENST00000412937 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
NR1H3-205ENST00000412937 ABCC8Q09428 1581 aa28.97■■■□□ 2.23
NR1H3-205ENST00000412937 DNMBPQ6XZF7 1577 aa28.97■■■□□ 2.23
NR1H3-205ENST00000412937 IFT140Q96RY7 1462 aa28.95■■■□□ 2.22
NR1H3-205ENST00000412937 ZNF608Q9ULD9 1512 aaPredicted RBP28.93■■■□□ 2.22
NR1H3-205ENST00000412937 POLA1P09884 1462 aaPredicted RBP28.8■■■□□ 2.2
NR1H3-205ENST00000412937 TARBP1Q13395 1621 aaKnown RBP28.77■■■□□ 2.2
NR1H3-205ENST00000412937 OSCARQ8IYS5 282 aa28.77■■■□□ 2.2
NR1H3-205ENST00000412937 RAD54L2Q9Y4B4 1467 aa28.76■■■□□ 2.19
NR1H3-205ENST00000412937 CUX1P39880 1505 aa28.74■■■□□ 2.19
NR1H3-205ENST00000412937 EIF4G3O43432 1585 aaKnown RBP28.74■■■□□ 2.19
NR1H3-205ENST00000412937 AQRO60306 1485 aaKnown RBP eCLIP28.73■■■□□ 2.199e-8■■■■□ 21.2
NR1H3-205ENST00000412937 SOGA1O94964 1423 aa28.7■■■□□ 2.19
NR1H3-205ENST00000412937 FGD5Q6ZNL6 1462 aa28.69■■■□□ 2.18
NR1H3-205ENST00000412937 TDRD9Q8NDG6 1382 aaKnown RBP28.63■■■□□ 2.17
NR1H3-205ENST00000412937 TRIM41Q8WV44 630 aa28.57■■■□□ 2.16
NR1H3-205ENST00000412937 FBLN2P98095 1184 aa28.52■■■□□ 2.16
NR1H3-205ENST00000412937 CHD1O14646 1710 aa28.5■■■□□ 2.15
NR1H3-205ENST00000412937 WDR97A6NE52 1622 aa28.43■■■□□ 2.14
NR1H3-205ENST00000412937 SNAPC4Q5SXM2 1469 aa28.42■■■□□ 2.14
NR1H3-205ENST00000412937 WRNQ14191 1432 aaPredicted RBP eCLIP28.4■■■□□ 2.14
NR1H3-205ENST00000412937 SYNJ1O43426 1573 aa28.37■■■□□ 2.13
NR1H3-205ENST00000412937 GRIN2BQ13224 1484 aa28.36■■■□□ 2.13
NR1H3-205ENST00000412937 RIMBP3CA6NJZ7 1639 aa28.36■■■□□ 2.13
NR1H3-205ENST00000412937 RIMBP3BA6NNM3 1639 aa28.36■■■□□ 2.13
NR1H3-205ENST00000412937 RIMBP3Q9UFD9 1639 aa28.36■■■□□ 2.13
NR1H3-205ENST00000412937 ABCA10Q8WWZ4 1543 aa28.35■■■□□ 2.13
NR1H3-205ENST00000412937 TOP2BQ02880 1626 aa28.35■■■□□ 2.13
NR1H3-205ENST00000412937 BIVM-ERCC5R4GMW8 1640 aa28.35■■■□□ 2.13
NR1H3-205ENST00000412937 GAPVD1Q14C86 1478 aa28.34■■■□□ 2.13
NR1H3-205ENST00000412937 CHMP7Q8WUX9 453 aaPredicted RBP28.32■■■□□ 2.12
NR1H3-205ENST00000412937 PBRM1Q86U86 1689 aa28.32■■■□□ 2.12
NR1H3-205ENST00000412937 MAGI1Q96QZ7 1491 aaPredicted RBP28.29■■■□□ 2.12
NR1H3-205ENST00000412937 ARHGEF11O15085 1522 aa28.28■■■□□ 2.12
NR1H3-205ENST00000412937 ABCA5Q8WWZ7 1642 aa28.27■■■□□ 2.12
NR1H3-205ENST00000412937 SYNJ2O15056 1496 aa28.21■■■□□ 2.11
NR1H3-205ENST00000412937 CYB5RLQ6IPT4 315 aa28.14■■■□□ 2.1
NR1H3-205ENST00000412937 CLASP1Q7Z460 1538 aa28.12■■■□□ 2.09
NR1H3-205ENST00000412937 ARAP1Q96P48 1450 aa28.04■■■□□ 2.08
NR1H3-205ENST00000412937 ADAMTS12P58397 1594 aa28.03■■■□□ 2.08
NR1H3-205ENST00000412937 GRIN2AQ12879 1464 aa28■■■□□ 2.07
NR1H3-205ENST00000412937 ERICH3Q5RHP9 1530 aa27.98■■■□□ 2.07
NR1H3-205ENST00000412937 FHAD1B1AJZ9 1412 aa27.98■■■□□ 2.07
NR1H3-205ENST00000412937 CEP170Q5SW79 1584 aa27.92■■■□□ 2.06
NR1H3-205ENST00000412937 NUP160Q12769 1436 aa27.88■■■□□ 2.05
NR1H3-205ENST00000412937 KIF27Q86VH2 1401 aa27.82■■■□□ 2.04
NR1H3-205ENST00000412937 ERCC6L2Q5T890 1561 aa27.81■■■□□ 2.04
NR1H3-205ENST00000412937 IGF1RP08069 1367 aa27.8■■■□□ 2.04
NR1H3-205ENST00000412937 SHROOM2Q13796 1616 aa27.7■■■□□ 2.03
NR1H3-205ENST00000412937 TRHP20396 242 aaPredicted RBP27.7■■■□□ 2.02
NR1H3-205ENST00000412937 JPH4Q96JJ6 628 aa27.68■■■□□ 2.02
NR1H3-205ENST00000412937 CUL7Q14999 1698 aa27.66■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 114.6 ms