RNA–Protein interactions for RNA: ENST00000412913.1

SMARCAL1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-204ENST00000412913 NISCHQ9Y2I1 1504 aa25.12■■□□□ 1.61
SMARCAL1-204ENST00000412913 CCDC180Q9P1Z9 1646 aa22.23■■□□□ 1.15
SMARCAL1-204ENST00000412913 ABCC9O60706 1549 aa21.14■□□□□ 0.97
SMARCAL1-204ENST00000412913 ZCCHC6Q5VYS8 1495 aaKnown RBP21.09■□□□□ 0.97
SMARCAL1-204ENST00000412913 DCAF1Q9Y4B6 1507 aa20.84■□□□□ 0.93
SMARCAL1-204ENST00000412913 MYO15BQ96JP2 1530 aa20.74■□□□□ 0.91
SMARCAL1-204ENST00000412913 NACADO15069 1562 aa20.68■□□□□ 0.9
SMARCAL1-204ENST00000412913 RB1CC1Q8TDY2 1594 aa20.59■□□□□ 0.89
SMARCAL1-204ENST00000412913 DCAF8L2P0C7V8 631 aa20.51■□□□□ 0.87
SMARCAL1-204ENST00000412913 UNC13AQ9UPW8 1703 aa20.31■□□□□ 0.84
SMARCAL1-204ENST00000412913 SCRIBQ14160 1630 aa20.27■□□□□ 0.84
SMARCAL1-204ENST00000412913 SHROOM4Q9ULL8 1493 aa20.05■□□□□ 0.8
SMARCAL1-204ENST00000412913 BICRAQ9NZM4 1560 aa20.04■□□□□ 0.8
SMARCAL1-204ENST00000412913 PABPN1Q86U42 306 aaKnown RBP eCLIP19.73■□□□□ 0.75
SMARCAL1-204ENST00000412913 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
SMARCAL1-204ENST00000412913 SMARCA4P51532 1647 aa19.46■□□□□ 0.71
SMARCAL1-204ENST00000412913 BAZ1AQ9NRL2 1556 aaPredicted RBP19.44■□□□□ 0.7
SMARCAL1-204ENST00000412913 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
SMARCAL1-204ENST00000412913 MROH2BQ7Z745 1585 aa19.4■□□□□ 0.7
SMARCAL1-204ENST00000412913 RSF1Q96T23 1441 aaPredicted RBP19.29■□□□□ 0.68
SMARCAL1-204ENST00000412913 PEG3Q9GZU2 1588 aa19.27■□□□□ 0.67
SMARCAL1-204ENST00000412913 WIZO95785 1651 aa19.25■□□□□ 0.67
SMARCAL1-204ENST00000412913 CC2D2AQ9P2K1 1620 aa19.22■□□□□ 0.67
SMARCAL1-204ENST00000412913 SMARCA2P51531 1590 aa19.15■□□□□ 0.66
SMARCAL1-204ENST00000412913 ATAD2BQ9ULI0 1458 aa19.15■□□□□ 0.66
SMARCAL1-204ENST00000412913 HMGXB3Q12766 1538 aa19.08■□□□□ 0.64
SMARCAL1-204ENST00000412913 TOP2AP11388 1531 aaKnown RBP19.05■□□□□ 0.64
SMARCAL1-204ENST00000412913 NCAPD3P42695 1498 aa19.03■□□□□ 0.64
SMARCAL1-204ENST00000412913 SUPT5HO00267 1087 aaKnown RBP19■□□□□ 0.63
SMARCAL1-204ENST00000412913 BAZ1BQ9UIG0 1483 aaKnown RBP19■□□□□ 0.63
SMARCAL1-204ENST00000412913 DNAJC5BQ9UF47 199 aa18.91■□□□□ 0.62
SMARCAL1-204ENST00000412913 CCDC88BA6NC98 1476 aa18.76■□□□□ 0.59
SMARCAL1-204ENST00000412913 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
SMARCAL1-204ENST00000412913 PRDM2Q13029 1718 aa18.61■□□□□ 0.57
SMARCAL1-204ENST00000412913 CFTRP13569 1480 aa18.52■□□□□ 0.56
SMARCAL1-204ENST00000412913 LAMC3Q9Y6N6 1575 aa18.51■□□□□ 0.55
SMARCAL1-204ENST00000412913 NESP48681 1621 aa18.48■□□□□ 0.55
SMARCAL1-204ENST00000412913 CADPSQ9ULU8 1353 aa18.46■□□□□ 0.55
SMARCAL1-204ENST00000412913 KIF21AQ7Z4S6 1674 aa18.38■□□□□ 0.53
SMARCAL1-204ENST00000412913 FANCD2Q9BXW9 1451 aa18.3■□□□□ 0.52
SMARCAL1-204ENST00000412913 ABCC8Q09428 1581 aa18.29■□□□□ 0.52
SMARCAL1-204ENST00000412913 PDS5BQ9NTI5 1447 aa18.25■□□□□ 0.51
SMARCAL1-204ENST00000412913 CEP164Q9UPV0 1460 aa18.24■□□□□ 0.51
SMARCAL1-204ENST00000412913 SYNJ1O43426 1573 aa18.21■□□□□ 0.51
SMARCAL1-204ENST00000412913 THOC2Q8NI27 1593 aaKnown RBP18.21■□□□□ 0.51
SMARCAL1-204ENST00000412913 BIVM-ERCC5R4GMW8 1640 aa18.2■□□□□ 0.5
SMARCAL1-204ENST00000412913 CUX1P39880 1505 aa18.17■□□□□ 0.5
SMARCAL1-204ENST00000412913 TOP2BQ02880 1626 aa18.16■□□□□ 0.5
SMARCAL1-204ENST00000412913 WRNQ14191 1432 aaPredicted RBP eCLIP18.15■□□□□ 0.5
SMARCAL1-204ENST00000412913 DNMBPQ6XZF7 1577 aa18.15■□□□□ 0.5
SMARCAL1-204ENST00000412913 URB2Q14146 1524 aaKnown RBP18.14■□□□□ 0.49
SMARCAL1-204ENST00000412913 ERCC6Q03468 1493 aa18.13■□□□□ 0.49
SMARCAL1-204ENST00000412913 MRC2Q9UBG0 1479 aa18.13■□□□□ 0.49
SMARCAL1-204ENST00000412913 WDR62O43379 1518 aa18.11■□□□□ 0.49
SMARCAL1-204ENST00000412913 TOPBP1Q92547 1522 aa18.1■□□□□ 0.49
SMARCAL1-204ENST00000412913 CHIC1Q5VXU3 224 aa18.08■□□□□ 0.48
SMARCAL1-204ENST00000412913 FGD5Q6ZNL6 1462 aa18.01■□□□□ 0.47
SMARCAL1-204ENST00000412913 WDR97A6NE52 1622 aa17.99■□□□□ 0.47
SMARCAL1-204ENST00000412913 POLA1P09884 1462 aaPredicted RBP17.98■□□□□ 0.47
SMARCAL1-204ENST00000412913 TARBP1Q13395 1621 aaKnown RBP17.93■□□□□ 0.46
SMARCAL1-204ENST00000412913 CUX2O14529 1486 aa17.92■□□□□ 0.46
SMARCAL1-204ENST00000412913 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
SMARCAL1-204ENST00000412913 RAD54L2Q9Y4B4 1467 aa17.87■□□□□ 0.45
SMARCAL1-204ENST00000412913 ABCA10Q8WWZ4 1543 aa17.86■□□□□ 0.45
SMARCAL1-204ENST00000412913 ABCA5Q8WWZ7 1642 aa17.83■□□□□ 0.45
SMARCAL1-204ENST00000412913 IFT140Q96RY7 1462 aa17.82■□□□□ 0.44
SMARCAL1-204ENST00000412913 SOGA1O94964 1423 aa17.81■□□□□ 0.44
SMARCAL1-204ENST00000412913 RUSC2Q8N2Y8 1516 aa17.77■□□□□ 0.44
SMARCAL1-204ENST00000412913 EIF4G3O43432 1585 aaKnown RBP17.77■□□□□ 0.44
SMARCAL1-204ENST00000412913 PBRM1Q86U86 1689 aa17.76■□□□□ 0.43
SMARCAL1-204ENST00000412913 ZNF608Q9ULD9 1512 aaPredicted RBP17.74■□□□□ 0.43
SMARCAL1-204ENST00000412913 EEA1Q15075 1411 aa17.7■□□□□ 0.42
SMARCAL1-204ENST00000412913 KIF27Q86VH2 1401 aa17.69■□□□□ 0.42
SMARCAL1-204ENST00000412913 GAPVD1Q14C86 1478 aa17.66■□□□□ 0.42
SMARCAL1-204ENST00000412913 ERICH3Q5RHP9 1530 aa17.65■□□□□ 0.42
SMARCAL1-204ENST00000412913 TDRD9Q8NDG6 1382 aaKnown RBP17.65■□□□□ 0.42
SMARCAL1-204ENST00000412913 AQRO60306 1485 aaKnown RBP eCLIP17.64■□□□□ 0.41
SMARCAL1-204ENST00000412913 CUL7Q14999 1698 aa17.64■□□□□ 0.41
SMARCAL1-204ENST00000412913 ADAMTS12P58397 1594 aa17.62■□□□□ 0.41
SMARCAL1-204ENST00000412913 KIF21BO75037 1637 aa17.6■□□□□ 0.41
SMARCAL1-204ENST00000412913 GRIN2BQ13224 1484 aa17.59■□□□□ 0.41
SMARCAL1-204ENST00000412913 IGF1RP08069 1367 aa17.56■□□□□ 0.4
SMARCAL1-204ENST00000412913 PRXQ9BXM0 1461 aa17.56■□□□□ 0.4
SMARCAL1-204ENST00000412913 SNAPC4Q5SXM2 1469 aa17.55■□□□□ 0.4
SMARCAL1-204ENST00000412913 FAM9AQ8IZU1 332 aaPredicted RBP17.54■□□□□ 0.4
SMARCAL1-204ENST00000412913 MAGI1Q96QZ7 1491 aaPredicted RBP17.52■□□□□ 0.4
SMARCAL1-204ENST00000412913 CSRNP3Q8WYN3 585 aa17.5■□□□□ 0.39
SMARCAL1-204ENST00000412913 CHD1O14646 1710 aa17.48■□□□□ 0.39
SMARCAL1-204ENST00000412913 RAPGEF2Q9Y4G8 1499 aa17.48■□□□□ 0.39
SMARCAL1-204ENST00000412913 FHAD1B1AJZ9 1412 aa17.47■□□□□ 0.39
SMARCAL1-204ENST00000412913 GOLGA3Q08378 1498 aa17.45■□□□□ 0.38
SMARCAL1-204ENST00000412913 CARMIL1Q5VZK9 1371 aa17.45■□□□□ 0.38
SMARCAL1-204ENST00000412913 SYNJ2O15056 1496 aa17.44■□□□□ 0.38
SMARCAL1-204ENST00000412913 CTTNBP2Q8WZ74 1663 aa17.43■□□□□ 0.38
SMARCAL1-204ENST00000412913 GRIN2AQ12879 1464 aa17.41■□□□□ 0.38
SMARCAL1-204ENST00000412913 CEP170Q5SW79 1584 aa17.37■□□□□ 0.37
SMARCAL1-204ENST00000412913 NUP160Q12769 1436 aa17.31■□□□□ 0.36
SMARCAL1-204ENST00000412913 LOC105371045A0A1W2PR82 267 aa17.3■□□□□ 0.36
SMARCAL1-204ENST00000412913 TNIKQ9UKE5 1360 aa17.28■□□□□ 0.36
SMARCAL1-204ENST00000412913 EHMT2Q96KQ7 1210 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms