RNA–Protein interactions for RNA: ENST00000412869.5

PCYT1A-203, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-203ENST00000412869 NISCHQ9Y2I1 1504 aa19.16■□□□□ 0.66
PCYT1A-203ENST00000412869 CCDC180Q9P1Z9 1646 aa16.81■□□□□ 0.28
PCYT1A-203ENST00000412869 ZCCHC6Q5VYS8 1495 aaKnown RBP16.13■□□□□ 0.17
PCYT1A-203ENST00000412869 CHIC1Q5VXU3 224 aa16.06■□□□□ 0.16
PCYT1A-203ENST00000412869 DCAF1Q9Y4B6 1507 aa15.94■□□□□ 0.14
PCYT1A-203ENST00000412869 AEBP2Q6ZN18 517 aaPredicted RBP15.81■□□□□ 0.12
PCYT1A-203ENST00000412869 MYO15BQ96JP2 1530 aa15.73■□□□□ 0.11
PCYT1A-203ENST00000412869 DCAF8L2P0C7V8 631 aa15.63■□□□□ 0.09
PCYT1A-203ENST00000412869 ABCC9O60706 1549 aa15.59■□□□□ 0.09
PCYT1A-203ENST00000412869 NACADO15069 1562 aa15.58■□□□□ 0.08
PCYT1A-203ENST00000412869 SHROOM4Q9ULL8 1493 aa15.52■□□□□ 0.08
PCYT1A-203ENST00000412869 RB1CC1Q8TDY2 1594 aa15.42■□□□□ 0.06
PCYT1A-203ENST00000412869 SCRIBQ14160 1630 aa15.32■□□□□ 0.04
PCYT1A-203ENST00000412869 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
PCYT1A-203ENST00000412869 SUPT5HO00267 1087 aaKnown RBP14.99□□□□□ -0.01
PCYT1A-203ENST00000412869 BICRAQ9NZM4 1560 aa14.86□□□□□ -0.03
PCYT1A-203ENST00000412869 RSF1Q96T23 1441 aaPredicted RBP14.84□□□□□ -0.03
PCYT1A-203ENST00000412869 BAZ1AQ9NRL2 1556 aaPredicted RBP14.84□□□□□ -0.03
PCYT1A-203ENST00000412869 CECR2Q9BXF3 1484 aa14.78□□□□□ -0.04
PCYT1A-203ENST00000412869 MROH2BQ7Z745 1585 aa14.75□□□□□ -0.05
PCYT1A-203ENST00000412869 SMARCA4P51532 1647 aa14.74□□□□□ -0.05
PCYT1A-203ENST00000412869 WIZO95785 1651 aa14.66□□□□□ -0.06
PCYT1A-203ENST00000412869 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
PCYT1A-203ENST00000412869 PEG3Q9GZU2 1588 aa14.6□□□□□ -0.07
PCYT1A-203ENST00000412869 TOP2AP11388 1531 aaKnown RBP14.57□□□□□ -0.08
PCYT1A-203ENST00000412869 SMARCA2P51531 1590 aa14.51□□□□□ -0.09
PCYT1A-203ENST00000412869 EIF4G1Q04637 1599 aaKnown RBP14.44□□□□□ -0.1
PCYT1A-203ENST00000412869 ATAD2BQ9ULI0 1458 aa14.42□□□□□ -0.1
PCYT1A-203ENST00000412869 BAZ1BQ9UIG0 1483 aaKnown RBP14.38□□□□□ -0.11
PCYT1A-203ENST00000412869 HMGXB3Q12766 1538 aa14.36□□□□□ -0.11
PCYT1A-203ENST00000412869 CCDC88BA6NC98 1476 aa14.35□□□□□ -0.11
PCYT1A-203ENST00000412869 NCAPD3P42695 1498 aa14.31□□□□□ -0.12
PCYT1A-203ENST00000412869 CC2D2AQ9P2K1 1620 aa14.19□□□□□ -0.14
PCYT1A-203ENST00000412869 TRIM41Q8WV44 630 aa14.17□□□□□ -0.14
PCYT1A-203ENST00000412869 PHF23Q9BUL5 403 aaPredicted RBP14.16□□□□□ -0.14
PCYT1A-203ENST00000412869 PRDM2Q13029 1718 aa14.1□□□□□ -0.15
PCYT1A-203ENST00000412869 ABCC8Q09428 1581 aa14.06□□□□□ -0.16
PCYT1A-203ENST00000412869 CFTRP13569 1480 aa14.01□□□□□ -0.17
PCYT1A-203ENST00000412869 WRNQ14191 1432 aaPredicted RBP eCLIP14.01□□□□□ -0.17
PCYT1A-203ENST00000412869 EEA1Q15075 1411 aa13.95□□□□□ -0.18
PCYT1A-203ENST00000412869 BIVM-ERCC5R4GMW8 1640 aa13.94□□□□□ -0.18
PCYT1A-203ENST00000412869 SYNJ1O43426 1573 aa13.94□□□□□ -0.18
PCYT1A-203ENST00000412869 TOP2BQ02880 1626 aa13.93□□□□□ -0.18
PCYT1A-203ENST00000412869 CADPSQ9ULU8 1353 aa13.93□□□□□ -0.18
PCYT1A-203ENST00000412869 LAMC3Q9Y6N6 1575 aa13.88□□□□□ -0.19
PCYT1A-203ENST00000412869 FAM9AQ8IZU1 332 aaPredicted RBP13.81□□□□□ -0.2
PCYT1A-203ENST00000412869 CUX1P39880 1505 aa13.8□□□□□ -0.2
PCYT1A-203ENST00000412869 LOC105371045A0A1W2PR82 267 aa13.8□□□□□ -0.2
PCYT1A-203ENST00000412869 SOGA1O94964 1423 aa13.78□□□□□ -0.2
PCYT1A-203ENST00000412869 FANCD2Q9BXW9 1451 aa13.78□□□□□ -0.2
PCYT1A-203ENST00000412869 KIF21BO75037 1637 aa13.75□□□□□ -0.21
PCYT1A-203ENST00000412869 CSRNP3Q8WYN3 585 aa13.73□□□□□ -0.21
PCYT1A-203ENST00000412869 DNMBPQ6XZF7 1577 aa13.73□□□□□ -0.21
PCYT1A-203ENST00000412869 PDS5BQ9NTI5 1447 aa13.73□□□□□ -0.21
PCYT1A-203ENST00000412869 CEP164Q9UPV0 1460 aa13.72□□□□□ -0.21
PCYT1A-203ENST00000412869 GOLGA3Q08378 1498 aa13.71□□□□□ -0.21
PCYT1A-203ENST00000412869 NESP48681 1621 aa13.7□□□□□ -0.22
PCYT1A-203ENST00000412869 RUSC2Q8N2Y8 1516 aa13.69□□□□□ -0.22
PCYT1A-203ENST00000412869 KIF27Q86VH2 1401 aa13.68□□□□□ -0.22
PCYT1A-203ENST00000412869 FGD5Q6ZNL6 1462 aa13.66□□□□□ -0.22
PCYT1A-203ENST00000412869 TNIKQ9UKE5 1360 aa13.65□□□□□ -0.22
PCYT1A-203ENST00000412869 KIF21AQ7Z4S6 1674 aa13.65□□□□□ -0.22
PCYT1A-203ENST00000412869 ERICH3Q5RHP9 1530 aa13.64□□□□□ -0.23
PCYT1A-203ENST00000412869 TOPBP1Q92547 1522 aa13.64□□□□□ -0.23
PCYT1A-203ENST00000412869 PRXQ9BXM0 1461 aa13.58□□□□□ -0.24
PCYT1A-203ENST00000412869 URB2Q14146 1524 aaKnown RBP13.58□□□□□ -0.24
PCYT1A-203ENST00000412869 CUX2O14529 1486 aa13.57□□□□□ -0.24
PCYT1A-203ENST00000412869 POLA1P09884 1462 aaPredicted RBP13.57□□□□□ -0.24
PCYT1A-203ENST00000412869 ABCA10Q8WWZ4 1543 aa13.57□□□□□ -0.24
PCYT1A-203ENST00000412869 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
PCYT1A-203ENST00000412869 CEP162Q5TB80 1403 aa13.56□□□□□ -0.24
PCYT1A-203ENST00000412869 UBTFP17480 764 aaKnown RBP13.55□□□□□ -0.24
PCYT1A-203ENST00000412869 DNAJC5BQ9UF47 199 aa13.55□□□□□ -0.24
PCYT1A-203ENST00000412869 EHMT2Q96KQ7 1210 aa13.54□□□□□ -0.24
PCYT1A-203ENST00000412869 MRC2Q9UBG0 1479 aa13.54□□□□□ -0.24
PCYT1A-203ENST00000412869 RAPGEF2Q9Y4G8 1499 aa13.54□□□□□ -0.24
PCYT1A-203ENST00000412869 CUL7Q14999 1698 aa13.52□□□□□ -0.25
PCYT1A-203ENST00000412869 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
PCYT1A-203ENST00000412869 WDR62O43379 1518 aa13.48□□□□□ -0.25
PCYT1A-203ENST00000412869 RAD54L2Q9Y4B4 1467 aa13.47□□□□□ -0.25
PCYT1A-203ENST00000412869 CLIP1P30622 1438 aa13.46□□□□□ -0.26
PCYT1A-203ENST00000412869 TARBP1Q13395 1621 aaKnown RBP13.46□□□□□ -0.26
PCYT1A-203ENST00000412869 IGF1RP08069 1367 aa13.45□□□□□ -0.26
PCYT1A-203ENST00000412869 ERCC6Q03468 1493 aa13.43□□□□□ -0.26
PCYT1A-203ENST00000412869 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
PCYT1A-203ENST00000412869 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
PCYT1A-203ENST00000412869 GAPVD1Q14C86 1478 aa13.4□□□□□ -0.26
PCYT1A-203ENST00000412869 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
PCYT1A-203ENST00000412869 IFT140Q96RY7 1462 aa13.39□□□□□ -0.27
PCYT1A-203ENST00000412869 PBRM1Q86U86 1689 aa13.39□□□□□ -0.27
PCYT1A-203ENST00000412869 CTTNBP2Q8WZ74 1663 aa13.37□□□□□ -0.27
PCYT1A-203ENST00000412869 VPS8Q8N3P4 1428 aa13.37□□□□□ -0.27
PCYT1A-203ENST00000412869 SENP3Q9H4L4 574 aaPredicted RBP13.35□□□□□ -0.27
PCYT1A-203ENST00000412869 PCGF6Q9BYE7 350 aa13.32□□□□□ -0.28
PCYT1A-203ENST00000412869 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
PCYT1A-203ENST00000412869 PLPPR3Q6T4P5 718 aa13.31□□□□□ -0.28
PCYT1A-203ENST00000412869 GRIN2BQ13224 1484 aa13.3□□□□□ -0.28
PCYT1A-203ENST00000412869 EFCAB5A4FU69 1503 aa13.3□□□□□ -0.28
PCYT1A-203ENST00000412869 ADAMTS12P58397 1594 aa13.29□□□□□ -0.28
PCYT1A-203ENST00000412869 ARAP1Q96P48 1450 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 848.9 ms