RNA–Protein interactions for RNA: ENST00000412442.1

SNX18P13-201, Transcript of sorting nexin 18 pseudogene 13, humanhuman

BASIC

Gene SNX18P13, Length 529 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18P13-201ENST00000412442 NISCHQ9Y2I1 1504 aa18.89■□□□□ 0.61
SNX18P13-201ENST00000412442 ABCC9O60706 1549 aa17.11■□□□□ 0.33
SNX18P13-201ENST00000412442 CCDC180Q9P1Z9 1646 aa16.85■□□□□ 0.29
SNX18P13-201ENST00000412442 DNAJC5BQ9UF47 199 aa16.26■□□□□ 0.19
SNX18P13-201ENST00000412442 RB1CC1Q8TDY2 1594 aa16.13■□□□□ 0.17
SNX18P13-201ENST00000412442 DCAF8L2P0C7V8 631 aa16.09■□□□□ 0.17
SNX18P13-201ENST00000412442 NACADO15069 1562 aa16.01■□□□□ 0.15
SNX18P13-201ENST00000412442 PABPN1Q86U42 306 aaKnown RBP eCLIP16.01■□□□□ 0.15
SNX18P13-201ENST00000412442 UNC13AQ9UPW8 1703 aa15.76■□□□□ 0.11
SNX18P13-201ENST00000412442 MYO15BQ96JP2 1530 aa15.75■□□□□ 0.11
SNX18P13-201ENST00000412442 BICRAQ9NZM4 1560 aa15.75■□□□□ 0.11
SNX18P13-201ENST00000412442 ZCCHC6Q5VYS8 1495 aaKnown RBP15.62■□□□□ 0.09
SNX18P13-201ENST00000412442 DCAF1Q9Y4B6 1507 aa15.53■□□□□ 0.08
SNX18P13-201ENST00000412442 SCRIBQ14160 1630 aa15.46■□□□□ 0.07
SNX18P13-201ENST00000412442 SHROOM4Q9ULL8 1493 aa15.4■□□□□ 0.06
SNX18P13-201ENST00000412442 CECR2Q9BXF3 1484 aa15.4■□□□□ 0.06
SNX18P13-201ENST00000412442 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
SNX18P13-201ENST00000412442 EIF4G1Q04637 1599 aaKnown RBP15.34■□□□□ 0.05
SNX18P13-201ENST00000412442 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
SNX18P13-201ENST00000412442 NCAPD3P42695 1498 aa14.85□□□□□ -0.03
SNX18P13-201ENST00000412442 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
SNX18P13-201ENST00000412442 ERCC6Q03468 1493 aa14.72□□□□□ -0.05
SNX18P13-201ENST00000412442 SMARCA4P51532 1647 aa14.72□□□□□ -0.05
SNX18P13-201ENST00000412442 NESP48681 1621 aa14.7□□□□□ -0.06
SNX18P13-201ENST00000412442 CUX2O14529 1486 aa14.69□□□□□ -0.06
SNX18P13-201ENST00000412442 SMARCA2P51531 1590 aa14.68□□□□□ -0.06
SNX18P13-201ENST00000412442 HMGXB3Q12766 1538 aa14.66□□□□□ -0.06
SNX18P13-201ENST00000412442 BAZ1BQ9UIG0 1483 aaKnown RBP14.62□□□□□ -0.07
SNX18P13-201ENST00000412442 BAZ1AQ9NRL2 1556 aaPredicted RBP14.61□□□□□ -0.07
SNX18P13-201ENST00000412442 MROH2BQ7Z745 1585 aa14.59□□□□□ -0.07
SNX18P13-201ENST00000412442 PEG3Q9GZU2 1588 aa14.56□□□□□ -0.08
SNX18P13-201ENST00000412442 THOC2Q8NI27 1593 aaKnown RBP14.47□□□□□ -0.09
SNX18P13-201ENST00000412442 LAMC3Q9Y6N6 1575 aa14.45□□□□□ -0.1
SNX18P13-201ENST00000412442 PDS5BQ9NTI5 1447 aa14.42□□□□□ -0.1
SNX18P13-201ENST00000412442 CADPSQ9ULU8 1353 aa14.42□□□□□ -0.1
SNX18P13-201ENST00000412442 KIF21AQ7Z4S6 1674 aa14.39□□□□□ -0.11
SNX18P13-201ENST00000412442 WIZO95785 1651 aa14.38□□□□□ -0.11
SNX18P13-201ENST00000412442 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
SNX18P13-201ENST00000412442 RSF1Q96T23 1441 aaPredicted RBP14.27□□□□□ -0.12
SNX18P13-201ENST00000412442 WDR62O43379 1518 aa14.25□□□□□ -0.13
SNX18P13-201ENST00000412442 TRIM41Q8WV44 630 aa14.23□□□□□ -0.13
SNX18P13-201ENST00000412442 FANCD2Q9BXW9 1451 aa14.23□□□□□ -0.13
SNX18P13-201ENST00000412442 CEP164Q9UPV0 1460 aa14.22□□□□□ -0.13
SNX18P13-201ENST00000412442 CFTRP13569 1480 aa14.21□□□□□ -0.13
SNX18P13-201ENST00000412442 TOP2AP11388 1531 aaKnown RBP14.15□□□□□ -0.14
SNX18P13-201ENST00000412442 URB2Q14146 1524 aaKnown RBP14.15□□□□□ -0.14
SNX18P13-201ENST00000412442 OSCARQ8IYS5 282 aa14.1□□□□□ -0.15
SNX18P13-201ENST00000412442 CCDC88BA6NC98 1476 aa14.07□□□□□ -0.16
SNX18P13-201ENST00000412442 ZNF608Q9ULD9 1512 aaPredicted RBP14.01□□□□□ -0.17
SNX18P13-201ENST00000412442 IFT140Q96RY7 1462 aa13.95□□□□□ -0.18
SNX18P13-201ENST00000412442 TOPBP1Q92547 1522 aa13.95□□□□□ -0.18
SNX18P13-201ENST00000412442 PRDM2Q13029 1718 aa13.9□□□□□ -0.18
SNX18P13-201ENST00000412442 AQRO60306 1485 aaKnown RBP eCLIP13.88□□□□□ -0.19
SNX18P13-201ENST00000412442 RIMBP3CA6NJZ7 1639 aa13.86□□□□□ -0.19
SNX18P13-201ENST00000412442 RIMBP3BA6NNM3 1639 aa13.86□□□□□ -0.19
SNX18P13-201ENST00000412442 RIMBP3Q9UFD9 1639 aa13.86□□□□□ -0.19
SNX18P13-201ENST00000412442 ABCC8Q09428 1581 aa13.84□□□□□ -0.19
SNX18P13-201ENST00000412442 DNMBPQ6XZF7 1577 aa13.84□□□□□ -0.19
SNX18P13-201ENST00000412442 ARHGEF11O15085 1522 aa13.83□□□□□ -0.2
SNX18P13-201ENST00000412442 EIF4G3O43432 1585 aaKnown RBP13.83□□□□□ -0.2
SNX18P13-201ENST00000412442 POLA1P09884 1462 aaPredicted RBP13.81□□□□□ -0.2
SNX18P13-201ENST00000412442 RAD54L2Q9Y4B4 1467 aa13.81□□□□□ -0.2
SNX18P13-201ENST00000412442 CYB5RLQ6IPT4 315 aa13.81□□□□□ -0.2
SNX18P13-201ENST00000412442 TARBP1Q13395 1621 aaKnown RBP13.8□□□□□ -0.2
SNX18P13-201ENST00000412442 FBLN2P98095 1184 aa13.8□□□□□ -0.2
SNX18P13-201ENST00000412442 TDRD9Q8NDG6 1382 aaKnown RBP13.79□□□□□ -0.2
SNX18P13-201ENST00000412442 SOGA1O94964 1423 aa13.76□□□□□ -0.21
SNX18P13-201ENST00000412442 CHD1O14646 1710 aa13.72□□□□□ -0.21
SNX18P13-201ENST00000412442 ARAP1Q96P48 1450 aa13.72□□□□□ -0.21
SNX18P13-201ENST00000412442 FGD5Q6ZNL6 1462 aa13.71□□□□□ -0.21
SNX18P13-201ENST00000412442 CUX1P39880 1505 aa13.69□□□□□ -0.22
SNX18P13-201ENST00000412442 SNAPC4Q5SXM2 1469 aa13.68□□□□□ -0.22
SNX18P13-201ENST00000412442 CHMP7Q8WUX9 453 aaPredicted RBP13.67□□□□□ -0.22
SNX18P13-201ENST00000412442 TRHP20396 242 aaPredicted RBP13.66□□□□□ -0.22
SNX18P13-201ENST00000412442 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
SNX18P13-201ENST00000412442 GRIN2BQ13224 1484 aa13.61□□□□□ -0.23
SNX18P13-201ENST00000412442 CLASP1Q7Z460 1538 aa13.61□□□□□ -0.23
SNX18P13-201ENST00000412442 MAGI1Q96QZ7 1491 aaPredicted RBP13.6□□□□□ -0.23
SNX18P13-201ENST00000412442 SYNJ2O15056 1496 aa13.57□□□□□ -0.24
SNX18P13-201ENST00000412442 GAPVD1Q14C86 1478 aa13.57□□□□□ -0.24
SNX18P13-201ENST00000412442 WDR97A6NE52 1622 aa13.57□□□□□ -0.24
SNX18P13-201ENST00000412442 SYNJ1O43426 1573 aa13.54□□□□□ -0.24
SNX18P13-201ENST00000412442 ABCA10Q8WWZ4 1543 aa13.53□□□□□ -0.24
SNX18P13-201ENST00000412442 PBRM1Q86U86 1689 aa13.48□□□□□ -0.25
SNX18P13-201ENST00000412442 ABCA5Q8WWZ7 1642 aa13.48□□□□□ -0.25
SNX18P13-201ENST00000412442 WRNQ14191 1432 aaPredicted RBP eCLIP13.47□□□□□ -0.25
SNX18P13-201ENST00000412442 ERCC6L2Q5T890 1561 aa13.46□□□□□ -0.25
SNX18P13-201ENST00000412442 GRIN2AQ12879 1464 aa13.44□□□□□ -0.26
SNX18P13-201ENST00000412442 NUP160Q12769 1436 aa13.42□□□□□ -0.26
SNX18P13-201ENST00000412442 CEP170Q5SW79 1584 aa13.41□□□□□ -0.26
SNX18P13-201ENST00000412442 ADAMTS12P58397 1594 aa13.4□□□□□ -0.26
SNX18P13-201ENST00000412442 FHAD1B1AJZ9 1412 aa13.39□□□□□ -0.27
SNX18P13-201ENST00000412442 TOP2BQ02880 1626 aa13.39□□□□□ -0.27
SNX18P13-201ENST00000412442 BIVM-ERCC5R4GMW8 1640 aa13.37□□□□□ -0.27
SNX18P13-201ENST00000412442 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
SNX18P13-201ENST00000412442 ERICH3Q5RHP9 1530 aa13.33□□□□□ -0.28
SNX18P13-201ENST00000412442 PRG4Q92954 1404 aaPredicted RBP13.31□□□□□ -0.28
SNX18P13-201ENST00000412442 SHROOM2Q13796 1616 aa13.31□□□□□ -0.28
SNX18P13-201ENST00000412442 AEBP2Q6ZN18 517 aaPredicted RBP13.28□□□□□ -0.28
SNX18P13-201ENST00000412442 IGF1RP08069 1367 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms