RNA–Protein interactions for RNA: ENST00000412438.5

MCFD2-209, Transcript of multiple coagulation factor deficiency 2, humanhuman

TSL 3

Gene MCFD2, Length 588 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCFD2-209ENST00000412438 NISCHQ9Y2I1 1504 aa41.86■■■■■ 4.29
MCFD2-209ENST00000412438 CCDC180Q9P1Z9 1646 aa37.3■■■■□ 3.56
MCFD2-209ENST00000412438 ABCC9O60706 1549 aa36.63■■■■□ 3.45
MCFD2-209ENST00000412438 RB1CC1Q8TDY2 1594 aa35.23■■■■□ 3.23
MCFD2-209ENST00000412438 NACADO15069 1562 aa35.16■■■■□ 3.22
MCFD2-209ENST00000412438 DCAF8L2P0C7V8 631 aa35.04■■■■□ 3.2
MCFD2-209ENST00000412438 MYO15BQ96JP2 1530 aa34.94■■■■□ 3.18
MCFD2-209ENST00000412438 ZCCHC6Q5VYS8 1495 aaKnown RBP34.82■■■■□ 3.16
MCFD2-209ENST00000412438 DCAF1Q9Y4B6 1507 aa34.69■■■■□ 3.14
MCFD2-209ENST00000412438 UNC13AQ9UPW8 1703 aa34.27■■■■□ 3.08
MCFD2-209ENST00000412438 PABPN1Q86U42 306 aaKnown RBP eCLIP34.2■■■■□ 3.07
MCFD2-209ENST00000412438 BICRAQ9NZM4 1560 aa34.08■■■■□ 3.05
MCFD2-209ENST00000412438 SCRIBQ14160 1630 aa33.93■■■■□ 3.02
MCFD2-209ENST00000412438 SHROOM4Q9ULL8 1493 aa33.88■■■■□ 3.01
MCFD2-209ENST00000412438 DNAJC5BQ9UF47 199 aa33.77■■■■□ 3
MCFD2-209ENST00000412438 EIF4G1Q04637 1599 aaKnown RBP33.24■■■□□ 2.91
MCFD2-209ENST00000412438 CC2D2AQ9P2K1 1620 aa33.13■■■□□ 2.89
MCFD2-209ENST00000412438 CECR2Q9BXF3 1484 aa32.98■■■□□ 2.87
MCFD2-209ENST00000412438 SMARCA4P51532 1647 aa32.49■■■□□ 2.79
MCFD2-209ENST00000412438 BAZ1AQ9NRL2 1556 aaPredicted RBP32.49■■■□□ 2.79
MCFD2-209ENST00000412438 NCAPD3P42695 1498 aa32.45■■■□□ 2.79
MCFD2-209ENST00000412438 ATAD2BQ9ULI0 1458 aa32.4■■■□□ 2.78
MCFD2-209ENST00000412438 SMARCA2P51531 1590 aa32.38■■■□□ 2.77
MCFD2-209ENST00000412438 HMGXB3Q12766 1538 aa32.25■■■□□ 2.75
MCFD2-209ENST00000412438 PEG3Q9GZU2 1588 aa32.23■■■□□ 2.75
MCFD2-209ENST00000412438 MROH2BQ7Z745 1585 aa32.2■■■□□ 2.75
MCFD2-209ENST00000412438 BAZ1BQ9UIG0 1483 aaKnown RBP32.12■■■□□ 2.73
MCFD2-209ENST00000412438 WIZO95785 1651 aa31.82■■■□□ 2.68
MCFD2-209ENST00000412438 RSF1Q96T23 1441 aaPredicted RBP31.81■■■□□ 2.68
MCFD2-209ENST00000412438 ERCC6Q03468 1493 aa31.65■■■□□ 2.66
MCFD2-209ENST00000412438 NESP48681 1621 aa31.6■■■□□ 2.65
MCFD2-209ENST00000412438 LAMC3Q9Y6N6 1575 aa31.6■■■□□ 2.65
MCFD2-209ENST00000412438 TOP2AP11388 1531 aaKnown RBP31.54■■■□□ 2.64
MCFD2-209ENST00000412438 CADPSQ9ULU8 1353 aa31.49■■■□□ 2.63
MCFD2-209ENST00000412438 PDS5BQ9NTI5 1447 aa31.44■■■□□ 2.62
MCFD2-209ENST00000412438 CUX2O14529 1486 aa31.41■■■□□ 2.62
MCFD2-209ENST00000412438 CFTRP13569 1480 aa31.25■■■□□ 2.59
MCFD2-209ENST00000412438 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
MCFD2-209ENST00000412438 THOC2Q8NI27 1593 aaKnown RBP31.19■■■□□ 2.58
MCFD2-209ENST00000412438 CCDC88BA6NC98 1476 aa31.16■■■□□ 2.58
MCFD2-209ENST00000412438 FANCD2Q9BXW9 1451 aa31.09■■■□□ 2.57
MCFD2-209ENST00000412438 CEP164Q9UPV0 1460 aa31.08■■■□□ 2.57
MCFD2-209ENST00000412438 MRC2Q9UBG0 1479 aa31.08■■■□□ 2.57
MCFD2-209ENST00000412438 WDR62O43379 1518 aa30.97■■■□□ 2.55
MCFD2-209ENST00000412438 PRDM2Q13029 1718 aa30.91■■■□□ 2.54
MCFD2-209ENST00000412438 SUPT5HO00267 1087 aaKnown RBP30.84■■■□□ 2.53
MCFD2-209ENST00000412438 URB2Q14146 1524 aaKnown RBP30.75■■■□□ 2.51
MCFD2-209ENST00000412438 DNAJC5Q9H3Z4 198 aa30.67■■■□□ 2.5
MCFD2-209ENST00000412438 ABCC8Q09428 1581 aa30.66■■■□□ 2.5
MCFD2-209ENST00000412438 TOPBP1Q92547 1522 aa30.56■■■□□ 2.48
MCFD2-209ENST00000412438 DNMBPQ6XZF7 1577 aa30.52■■■□□ 2.48
MCFD2-209ENST00000412438 IFT140Q96RY7 1462 aa30.46■■■□□ 2.47
MCFD2-209ENST00000412438 POLA1P09884 1462 aaPredicted RBP30.29■■■□□ 2.44
MCFD2-209ENST00000412438 ZNF608Q9ULD9 1512 aaPredicted RBP30.25■■■□□ 2.43
MCFD2-209ENST00000412438 CUX1P39880 1505 aa30.22■■■□□ 2.43
MCFD2-209ENST00000412438 TARBP1Q13395 1621 aaKnown RBP30.22■■■□□ 2.43
MCFD2-209ENST00000412438 SOGA1O94964 1423 aa30.2■■■□□ 2.42
MCFD2-209ENST00000412438 FGD5Q6ZNL6 1462 aa30.18■■■□□ 2.42
MCFD2-209ENST00000412438 EIF4G3O43432 1585 aaKnown RBP30.13■■■□□ 2.41
MCFD2-209ENST00000412438 RAD54L2Q9Y4B4 1467 aa30.12■■■□□ 2.41
MCFD2-209ENST00000412438 OSCARQ8IYS5 282 aa30.1■■■□□ 2.41
MCFD2-209ENST00000412438 AQRO60306 1485 aaKnown RBP eCLIP30.08■■■□□ 2.412e-6■■■□□ 18.3
MCFD2-209ENST00000412438 WDR97A6NE52 1622 aa30.07■■■□□ 2.4
MCFD2-209ENST00000412438 WRNQ14191 1432 aaPredicted RBP eCLIP30.02■■■□□ 2.4
MCFD2-209ENST00000412438 TDRD9Q8NDG6 1382 aaKnown RBP30.02■■■□□ 2.4
MCFD2-209ENST00000412438 TOP2BQ02880 1626 aa29.95■■■□□ 2.38
MCFD2-209ENST00000412438 BIVM-ERCC5R4GMW8 1640 aa29.93■■■□□ 2.38
MCFD2-209ENST00000412438 ABCA10Q8WWZ4 1543 aa29.91■■■□□ 2.38
MCFD2-209ENST00000412438 SYNJ1O43426 1573 aa29.88■■■□□ 2.37
MCFD2-209ENST00000412438 GRIN2BQ13224 1484 aa29.87■■■□□ 2.37
MCFD2-209ENST00000412438 GAPVD1Q14C86 1478 aa29.83■■■□□ 2.37
MCFD2-209ENST00000412438 MAGI1Q96QZ7 1491 aaPredicted RBP29.82■■■□□ 2.36
MCFD2-209ENST00000412438 SNAPC4Q5SXM2 1469 aa29.8■■■□□ 2.36
MCFD2-209ENST00000412438 FBLN2P98095 1184 aa29.79■■■□□ 2.36
MCFD2-209ENST00000412438 ABCA5Q8WWZ7 1642 aa29.76■■■□□ 2.35
MCFD2-209ENST00000412438 CHD1O14646 1710 aa29.74■■■□□ 2.35
MCFD2-209ENST00000412438 CHMP7Q8WUX9 453 aaPredicted RBP29.73■■■□□ 2.35
MCFD2-209ENST00000412438 PBRM1Q86U86 1689 aa29.7■■■□□ 2.35
MCFD2-209ENST00000412438 SYNJ2O15056 1496 aa29.7■■■□□ 2.35
MCFD2-209ENST00000412438 ERICH3Q5RHP9 1530 aa29.57■■■□□ 2.32
MCFD2-209ENST00000412438 ARHGEF11O15085 1522 aa29.53■■■□□ 2.32
MCFD2-209ENST00000412438 RIMBP3CA6NJZ7 1639 aa29.52■■■□□ 2.32
MCFD2-209ENST00000412438 RIMBP3BA6NNM3 1639 aa29.52■■■□□ 2.32
MCFD2-209ENST00000412438 RIMBP3Q9UFD9 1639 aa29.52■■■□□ 2.32
MCFD2-209ENST00000412438 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
MCFD2-209ENST00000412438 FHAD1B1AJZ9 1412 aa29.51■■■□□ 2.31
MCFD2-209ENST00000412438 ADAMTS12P58397 1594 aa29.49■■■□□ 2.31
MCFD2-209ENST00000412438 CLASP1Q7Z460 1538 aa29.49■■■□□ 2.31
MCFD2-209ENST00000412438 GRIN2AQ12879 1464 aa29.47■■■□□ 2.31
MCFD2-209ENST00000412438 KIF27Q86VH2 1401 aa29.45■■■□□ 2.3
MCFD2-209ENST00000412438 NUP160Q12769 1436 aa29.35■■■□□ 2.29
MCFD2-209ENST00000412438 IGF1RP08069 1367 aa29.32■■■□□ 2.28
MCFD2-209ENST00000412438 CYB5RLQ6IPT4 315 aa29.3■■■□□ 2.28
MCFD2-209ENST00000412438 CEP170Q5SW79 1584 aa29.27■■■□□ 2.28
MCFD2-209ENST00000412438 ARAP1Q96P48 1450 aa29.26■■■□□ 2.27
MCFD2-209ENST00000412438 CUL7Q14999 1698 aa29.24■■■□□ 2.27
MCFD2-209ENST00000412438 CARMIL1Q5VZK9 1371 aa29.15■■■□□ 2.26
MCFD2-209ENST00000412438 SHROOM2Q13796 1616 aa29.12■■■□□ 2.25
MCFD2-209ENST00000412438 JPH4Q96JJ6 628 aa29.08■■■□□ 2.25
MCFD2-209ENST00000412438 RUSC2Q8N2Y8 1516 aa29.05■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms