RNA–Protein interactions for RNA: ENST00000411845.3

NGRN-203, Transcript of neugrin, neurite outgrowth associated, humanhuman

TSL 3

Gene NGRN, Length 388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NGRN-203ENST00000411845 NISCHQ9Y2I1 1504 aa21.48■■□□□ 1.03
NGRN-203ENST00000411845 ABCC9O60706 1549 aa20.07■□□□□ 0.8
NGRN-203ENST00000411845 DNAJC5BQ9UF47 199 aa19.43■□□□□ 0.7
NGRN-203ENST00000411845 CCDC180Q9P1Z9 1646 aa19.39■□□□□ 0.69
NGRN-203ENST00000411845 RB1CC1Q8TDY2 1594 aa18.84■□□□□ 0.61
NGRN-203ENST00000411845 PABPN1Q86U42 306 aaKnown RBP eCLIP18.73■□□□□ 0.59
NGRN-203ENST00000411845 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
NGRN-203ENST00000411845 NACADO15069 1562 aa18.59■□□□□ 0.57
NGRN-203ENST00000411845 DNAJC5Q9H3Z4 198 aa18.32■□□□□ 0.52
NGRN-203ENST00000411845 UNC13AQ9UPW8 1703 aa18.25■□□□□ 0.51
NGRN-203ENST00000411845 BICRAQ9NZM4 1560 aa18.22■□□□□ 0.51
NGRN-203ENST00000411845 CECR2Q9BXF3 1484 aa18.16■□□□□ 0.5
NGRN-203ENST00000411845 MYO15BQ96JP2 1530 aa18.14■□□□□ 0.49
NGRN-203ENST00000411845 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
NGRN-203ENST00000411845 SHROOM4Q9ULL8 1493 aa17.97■□□□□ 0.47
NGRN-203ENST00000411845 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
NGRN-203ENST00000411845 DCAF1Q9Y4B6 1507 aa17.68■□□□□ 0.42
NGRN-203ENST00000411845 SCRIBQ14160 1630 aa17.68■□□□□ 0.42
NGRN-203ENST00000411845 ZCCHC6Q5VYS8 1495 aaKnown RBP17.61■□□□□ 0.41
NGRN-203ENST00000411845 CUX2O14529 1486 aa17.53■□□□□ 0.4
NGRN-203ENST00000411845 ERCC6Q03468 1493 aa17.42■□□□□ 0.38
NGRN-203ENST00000411845 TRIM41Q8WV44 630 aa17.28■□□□□ 0.36
NGRN-203ENST00000411845 NCAPD3P42695 1498 aa17.22■□□□□ 0.35
NGRN-203ENST00000411845 ATAD2BQ9ULI0 1458 aa17.05■□□□□ 0.32
NGRN-203ENST00000411845 NESP48681 1621 aa17.05■□□□□ 0.32
NGRN-203ENST00000411845 SMARCA2P51531 1590 aa16.96■□□□□ 0.31
NGRN-203ENST00000411845 HMGXB3Q12766 1538 aa16.92■□□□□ 0.3
NGRN-203ENST00000411845 PDS5BQ9NTI5 1447 aa16.89■□□□□ 0.29
NGRN-203ENST00000411845 THOC2Q8NI27 1593 aaKnown RBP16.87■□□□□ 0.29
NGRN-203ENST00000411845 OSCARQ8IYS5 282 aa16.86■□□□□ 0.29
NGRN-203ENST00000411845 AEBP2Q6ZN18 517 aaPredicted RBP16.85■□□□□ 0.29
NGRN-203ENST00000411845 BAZ1BQ9UIG0 1483 aaKnown RBP16.85■□□□□ 0.29
NGRN-203ENST00000411845 LAMC3Q9Y6N6 1575 aa16.85■□□□□ 0.29
NGRN-203ENST00000411845 SMARCA4P51532 1647 aa16.8■□□□□ 0.28
NGRN-203ENST00000411845 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
NGRN-203ENST00000411845 KIF21AQ7Z4S6 1674 aa16.71■□□□□ 0.27
NGRN-203ENST00000411845 BAZ1AQ9NRL2 1556 aaPredicted RBP16.7■□□□□ 0.26
NGRN-203ENST00000411845 MRC2Q9UBG0 1479 aa16.67■□□□□ 0.26
NGRN-203ENST00000411845 PEG3Q9GZU2 1588 aa16.64■□□□□ 0.25
NGRN-203ENST00000411845 WDR62O43379 1518 aa16.59■□□□□ 0.25
NGRN-203ENST00000411845 MROH2BQ7Z745 1585 aa16.51■□□□□ 0.23
NGRN-203ENST00000411845 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
NGRN-203ENST00000411845 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
NGRN-203ENST00000411845 CYB5RLQ6IPT4 315 aa16.48■□□□□ 0.23
NGRN-203ENST00000411845 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
NGRN-203ENST00000411845 RIMBP3CA6NJZ7 1639 aa16.41■□□□□ 0.22
NGRN-203ENST00000411845 RIMBP3BA6NNM3 1639 aa16.41■□□□□ 0.22
NGRN-203ENST00000411845 RIMBP3Q9UFD9 1639 aa16.41■□□□□ 0.22
NGRN-203ENST00000411845 CFTRP13569 1480 aa16.34■□□□□ 0.21
NGRN-203ENST00000411845 ARHGEF11O15085 1522 aa16.34■□□□□ 0.21
NGRN-203ENST00000411845 URB2Q14146 1524 aaKnown RBP16.29■□□□□ 0.2
NGRN-203ENST00000411845 WIZO95785 1651 aa16.26■□□□□ 0.19
NGRN-203ENST00000411845 IFT140Q96RY7 1462 aa16.22■□□□□ 0.19
NGRN-203ENST00000411845 FBLN2P98095 1184 aa16.22■□□□□ 0.19
NGRN-203ENST00000411845 ZNF608Q9ULD9 1512 aaPredicted RBP16.2■□□□□ 0.18
NGRN-203ENST00000411845 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
NGRN-203ENST00000411845 RSF1Q96T23 1441 aaPredicted RBP16.11■□□□□ 0.17
NGRN-203ENST00000411845 ABCC8Q09428 1581 aa16.09■□□□□ 0.17
NGRN-203ENST00000411845 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
NGRN-203ENST00000411845 AQRO60306 1485 aaKnown RBP eCLIP16.07■□□□□ 0.16
NGRN-203ENST00000411845 TOPBP1Q92547 1522 aa16.05■□□□□ 0.16
NGRN-203ENST00000411845 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
NGRN-203ENST00000411845 CHMP7Q8WUX9 453 aaPredicted RBP16.01■□□□□ 0.15
NGRN-203ENST00000411845 EIF4G3O43432 1585 aaKnown RBP15.99■□□□□ 0.15
NGRN-203ENST00000411845 CHD1O14646 1710 aa15.97■□□□□ 0.15
NGRN-203ENST00000411845 CCDC88BA6NC98 1476 aa15.93■□□□□ 0.14
NGRN-203ENST00000411845 PRDM2Q13029 1718 aa15.93■□□□□ 0.14
NGRN-203ENST00000411845 TDRD9Q8NDG6 1382 aaKnown RBP15.91■□□□□ 0.14
NGRN-203ENST00000411845 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
NGRN-203ENST00000411845 SOGA1O94964 1423 aa15.89■□□□□ 0.13
NGRN-203ENST00000411845 TARBP1Q13395 1621 aaKnown RBP15.88■□□□□ 0.13
NGRN-203ENST00000411845 POLA1P09884 1462 aaPredicted RBP15.84■□□□□ 0.13
NGRN-203ENST00000411845 RAD54L2Q9Y4B4 1467 aa15.83■□□□□ 0.12
NGRN-203ENST00000411845 SYNJ1O43426 1573 aa15.82■□□□□ 0.12
NGRN-203ENST00000411845 CLASP1Q7Z460 1538 aa15.8■□□□□ 0.12
NGRN-203ENST00000411845 SNAPC4Q5SXM2 1469 aa15.8■□□□□ 0.12
NGRN-203ENST00000411845 GAPVD1Q14C86 1478 aa15.79■□□□□ 0.12
NGRN-203ENST00000411845 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
NGRN-203ENST00000411845 GRIN2BQ13224 1484 aa15.75■□□□□ 0.11
NGRN-203ENST00000411845 SYNJ2O15056 1496 aa15.73■□□□□ 0.11
NGRN-203ENST00000411845 ILDR1Q86SU0 546 aaPredicted RBP15.73■□□□□ 0.11
NGRN-203ENST00000411845 WDR97A6NE52 1622 aa15.7■□□□□ 0.1
NGRN-203ENST00000411845 FGD5Q6ZNL6 1462 aa15.66■□□□□ 0.1
NGRN-203ENST00000411845 NPM1P06748 294 aaKnown RBP eCLIP15.62■□□□□ 0.09
NGRN-203ENST00000411845 FAM69CQ0P6D2 419 aa15.62■□□□□ 0.09
NGRN-203ENST00000411845 KDM4FA0A1W2PPD8 638 aa15.6■□□□□ 0.09
NGRN-203ENST00000411845 ERCC6L2Q5T890 1561 aa15.53■□□□□ 0.08
NGRN-203ENST00000411845 CUX1P39880 1505 aa15.53■□□□□ 0.08
NGRN-203ENST00000411845 JPH4Q96JJ6 628 aa15.52■□□□□ 0.08
NGRN-203ENST00000411845 GRIN2AQ12879 1464 aa15.5■□□□□ 0.07
NGRN-203ENST00000411845 CEP170Q5SW79 1584 aa15.49■□□□□ 0.07
NGRN-203ENST00000411845 ABCA10Q8WWZ4 1543 aa15.48■□□□□ 0.07
NGRN-203ENST00000411845 NUP160Q12769 1436 aa15.47■□□□□ 0.07
NGRN-203ENST00000411845 KIF13AQ9H1H9 1805 aa15.47■□□□□ 0.07
NGRN-203ENST00000411845 PBRM1Q86U86 1689 aa15.47■□□□□ 0.07
NGRN-203ENST00000411845 ABCC10Q5T3U5 1492 aa15.46■□□□□ 0.06
NGRN-203ENST00000411845 PRG4Q92954 1404 aaPredicted RBP15.44■□□□□ 0.06
NGRN-203ENST00000411845 FHAD1B1AJZ9 1412 aa15.42■□□□□ 0.06
NGRN-203ENST00000411845 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
NGRN-203ENST00000411845 ABCA5Q8WWZ7 1642 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms