RNA–Protein interactions for RNA: ENST00000411700.5

NUCB1-203, Transcript of nucleobindin 1, humanhuman

TSL 4

Gene NUCB1, Length 673 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUCB1-203ENST00000411700 NISCHQ9Y2I1 1504 aa50.05■■■■■ 5.6
NUCB1-203ENST00000411700 CCDC180Q9P1Z9 1646 aa44.57■■■■■ 4.73
NUCB1-203ENST00000411700 ABCC9O60706 1549 aa43.33■■■■■ 4.53
NUCB1-203ENST00000411700 RB1CC1Q8TDY2 1594 aa41.84■■■■■ 4.29
NUCB1-203ENST00000411700 NACADO15069 1562 aa41.81■■■■■ 4.28
NUCB1-203ENST00000411700 ZCCHC6Q5VYS8 1495 aaKnown RBP41.74■■■■■ 4.27
NUCB1-203ENST00000411700 MYO15BQ96JP2 1530 aa41.63■■■■■ 4.25
NUCB1-203ENST00000411700 DCAF8L2P0C7V8 631 aa41.59■■■■■ 4.25
NUCB1-203ENST00000411700 DCAF1Q9Y4B6 1507 aa41.48■■■■■ 4.23
NUCB1-203ENST00000411700 UNC13AQ9UPW8 1703 aa40.93■■■■■ 4.14
NUCB1-203ENST00000411700 SCRIBQ14160 1630 aa40.56■■■■■ 4.08
NUCB1-203ENST00000411700 BICRAQ9NZM4 1560 aa40.52■■■■■ 4.08
NUCB1-203ENST00000411700 PABPN1Q86U42 306 aaKnown RBP eCLIP40.42■■■■■ 4.06
NUCB1-203ENST00000411700 SHROOM4Q9ULL8 1493 aa40.21■■■■■ 4.03
NUCB1-203ENST00000411700 DNAJC5BQ9UF47 199 aa39.56■■■■□ 3.92
NUCB1-203ENST00000411700 EIF4G1Q04637 1599 aaKnown RBP39.46■■■■□ 3.91
NUCB1-203ENST00000411700 CC2D2AQ9P2K1 1620 aa39.27■■■■□ 3.88
NUCB1-203ENST00000411700 CECR2Q9BXF3 1484 aa38.95■■■■□ 3.83
NUCB1-203ENST00000411700 SMARCA4P51532 1647 aa38.85■■■■□ 3.81
NUCB1-203ENST00000411700 BAZ1AQ9NRL2 1556 aaPredicted RBP38.82■■■■□ 3.81
NUCB1-203ENST00000411700 SMARCA2P51531 1590 aa38.58■■■■□ 3.77
NUCB1-203ENST00000411700 ATAD2BQ9ULI0 1458 aa38.56■■■■□ 3.76
NUCB1-203ENST00000411700 MROH2BQ7Z745 1585 aa38.54■■■■□ 3.76
NUCB1-203ENST00000411700 NCAPD3P42695 1498 aa38.53■■■■□ 3.76
NUCB1-203ENST00000411700 PEG3Q9GZU2 1588 aa38.49■■■■□ 3.75
NUCB1-203ENST00000411700 HMGXB3Q12766 1538 aa38.43■■■■□ 3.74
NUCB1-203ENST00000411700 BAZ1BQ9UIG0 1483 aaKnown RBP38.27■■■■□ 3.72
NUCB1-203ENST00000411700 WIZO95785 1651 aa38.16■■■■□ 3.7
NUCB1-203ENST00000411700 RSF1Q96T23 1441 aaPredicted RBP38.12■■■■□ 3.69
NUCB1-203ENST00000411700 TOP2AP11388 1531 aaKnown RBP37.8■■■■□ 3.64
NUCB1-203ENST00000411700 LAMC3Q9Y6N6 1575 aa37.56■■■■□ 3.6
NUCB1-203ENST00000411700 NESP48681 1621 aa37.53■■■■□ 3.6
NUCB1-203ENST00000411700 CADPSQ9ULU8 1353 aa37.39■■■■□ 3.58
NUCB1-203ENST00000411700 ERCC6Q03468 1493 aa37.39■■■■□ 3.58
NUCB1-203ENST00000411700 CCDC88BA6NC98 1476 aa37.27■■■■□ 3.56
NUCB1-203ENST00000411700 PDS5BQ9NTI5 1447 aa37.24■■■■□ 3.55
NUCB1-203ENST00000411700 CFTRP13569 1480 aa37.21■■■■□ 3.55
NUCB1-203ENST00000411700 KIF21AQ7Z4S6 1674 aa37.19■■■■□ 3.54
NUCB1-203ENST00000411700 SUPT5HO00267 1087 aaKnown RBP37.13■■■■□ 3.53
NUCB1-203ENST00000411700 PRDM2Q13029 1718 aa37.1■■■■□ 3.53
NUCB1-203ENST00000411700 THOC2Q8NI27 1593 aaKnown RBP37.04■■■■□ 3.52
NUCB1-203ENST00000411700 CUX2O14529 1486 aa37.01■■■■□ 3.51
NUCB1-203ENST00000411700 FANCD2Q9BXW9 1451 aa36.98■■■■□ 3.51
NUCB1-203ENST00000411700 CEP164Q9UPV0 1460 aa36.95■■■■□ 3.51
NUCB1-203ENST00000411700 MRC2Q9UBG0 1479 aa36.88■■■■□ 3.49
NUCB1-203ENST00000411700 WDR62O43379 1518 aa36.78■■■■□ 3.48
NUCB1-203ENST00000411700 URB2Q14146 1524 aaKnown RBP36.59■■■■□ 3.45
NUCB1-203ENST00000411700 ABCC8Q09428 1581 aa36.45■■■■□ 3.43
NUCB1-203ENST00000411700 DNMBPQ6XZF7 1577 aa36.42■■■■□ 3.42
NUCB1-203ENST00000411700 TOPBP1Q92547 1522 aa36.41■■■■□ 3.42
NUCB1-203ENST00000411700 CUX1P39880 1505 aa36.17■■■■□ 3.38
NUCB1-203ENST00000411700 IFT140Q96RY7 1462 aa36.17■■■■□ 3.38
NUCB1-203ENST00000411700 POLA1P09884 1462 aaPredicted RBP36.11■■■■□ 3.37
NUCB1-203ENST00000411700 FGD5Q6ZNL6 1462 aa36.04■■■■□ 3.36
NUCB1-203ENST00000411700 TARBP1Q13395 1621 aaKnown RBP36.03■■■■□ 3.36
NUCB1-203ENST00000411700 WRNQ14191 1432 aaPredicted RBP eCLIP35.97■■■■□ 3.35
NUCB1-203ENST00000411700 BIVM-ERCC5R4GMW8 1640 aa35.96■■■■□ 3.35
NUCB1-203ENST00000411700 TOP2BQ02880 1626 aa35.94■■■■□ 3.34
NUCB1-203ENST00000411700 ZNF608Q9ULD9 1512 aaPredicted RBP35.93■■■■□ 3.34
NUCB1-203ENST00000411700 SOGA1O94964 1423 aa35.91■■■■□ 3.34
NUCB1-203ENST00000411700 EIF4G3O43432 1585 aaKnown RBP35.9■■■■□ 3.34
NUCB1-203ENST00000411700 SYNJ1O43426 1573 aa35.89■■■■□ 3.34
NUCB1-203ENST00000411700 RAD54L2Q9Y4B4 1467 aa35.89■■■■□ 3.34
NUCB1-203ENST00000411700 WDR97A6NE52 1622 aa35.84■■■■□ 3.33
NUCB1-203ENST00000411700 AQRO60306 1485 aaKnown RBP eCLIP35.73■■■■□ 3.318e-7■■■■■ 35.1
NUCB1-203ENST00000411700 ABCA10Q8WWZ4 1543 aa35.71■■■■□ 3.31
NUCB1-203ENST00000411700 TDRD9Q8NDG6 1382 aaKnown RBP35.66■■■■□ 3.3
NUCB1-203ENST00000411700 DNAJC5Q9H3Z4 198 aa35.61■■■■□ 3.29
NUCB1-203ENST00000411700 ABCA5Q8WWZ7 1642 aa35.6■■■■□ 3.29
NUCB1-203ENST00000411700 PBRM1Q86U86 1689 aa35.56■■■■□ 3.28
NUCB1-203ENST00000411700 GRIN2BQ13224 1484 aa35.54■■■■□ 3.28
NUCB1-203ENST00000411700 GAPVD1Q14C86 1478 aa35.54■■■■□ 3.28
NUCB1-203ENST00000411700 SNAPC4Q5SXM2 1469 aa35.47■■■■□ 3.27
NUCB1-203ENST00000411700 MAGI1Q96QZ7 1491 aaPredicted RBP35.46■■■■□ 3.27
NUCB1-203ENST00000411700 CHD1O14646 1710 aa35.44■■■■□ 3.26
NUCB1-203ENST00000411700 OSCARQ8IYS5 282 aa35.37■■■■□ 3.25
NUCB1-203ENST00000411700 ERICH3Q5RHP9 1530 aa35.32■■■■□ 3.24
NUCB1-203ENST00000411700 SYNJ2O15056 1496 aa35.29■■■■□ 3.24
NUCB1-203ENST00000411700 ADAMTS12P58397 1594 aa35.25■■■■□ 3.23
NUCB1-203ENST00000411700 FBLN2P98095 1184 aa35.23■■■■□ 3.23
NUCB1-203ENST00000411700 KIF27Q86VH2 1401 aa35.22■■■■□ 3.23
NUCB1-203ENST00000411700 CHMP7Q8WUX9 453 aaPredicted RBP35.19■■■■□ 3.22
NUCB1-203ENST00000411700 FHAD1B1AJZ9 1412 aa35.14■■■■□ 3.22
NUCB1-203ENST00000411700 TRIM41Q8WV44 630 aa35.1■■■■□ 3.21
NUCB1-203ENST00000411700 GRIN2AQ12879 1464 aa35.09■■■■□ 3.21
NUCB1-203ENST00000411700 CUL7Q14999 1698 aa35.05■■■■□ 3.2
NUCB1-203ENST00000411700 CLASP1Q7Z460 1538 aa35.03■■■■□ 3.2
NUCB1-203ENST00000411700 IGF1RP08069 1367 aa35■■■■□ 3.19
NUCB1-203ENST00000411700 NUP160Q12769 1436 aa34.92■■■■□ 3.18
NUCB1-203ENST00000411700 CEP170Q5SW79 1584 aa34.91■■■■□ 3.18
NUCB1-203ENST00000411700 RIMBP3CA6NJZ7 1639 aa34.89■■■■□ 3.18
NUCB1-203ENST00000411700 RIMBP3BA6NNM3 1639 aa34.89■■■■□ 3.18
NUCB1-203ENST00000411700 RIMBP3Q9UFD9 1639 aa34.89■■■■□ 3.18
NUCB1-203ENST00000411700 ARHGEF11O15085 1522 aa34.88■■■■□ 3.17
NUCB1-203ENST00000411700 RUSC2Q8N2Y8 1516 aa34.85■■■■□ 3.17
NUCB1-203ENST00000411700 CARMIL1Q5VZK9 1371 aa34.81■■■■□ 3.16
NUCB1-203ENST00000411700 CHIC1Q5VXU3 224 aa34.73■■■■□ 3.15
NUCB1-203ENST00000411700 SHROOM2Q13796 1616 aa34.7■■■■□ 3.14
NUCB1-203ENST00000411700 RAPGEF2Q9Y4G8 1499 aa34.66■■■■□ 3.14
NUCB1-203ENST00000411700 EEA1Q15075 1411 aa34.65■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms