RNA–Protein interactions for RNA: ENST00000411698.6

MDM1-204, Transcript of Mdm1 nuclear protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MDM1, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-204ENST00000411698 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
MDM1-204ENST00000411698 CCDC180Q9P1Z9 1646 aa26.38■■□□□ 1.81
MDM1-204ENST00000411698 ZCCHC6Q5VYS8 1495 aaKnown RBP25.25■■□□□ 1.63
MDM1-204ENST00000411698 ABCC9O60706 1549 aa25.06■■□□□ 1.6
MDM1-204ENST00000411698 DCAF1Q9Y4B6 1507 aa24.95■■□□□ 1.59
MDM1-204ENST00000411698 DCAF8L2P0C7V8 631 aa24.86■■□□□ 1.57
MDM1-204ENST00000411698 MYO15BQ96JP2 1530 aa24.76■■□□□ 1.55
MDM1-204ENST00000411698 NACADO15069 1562 aa24.63■■□□□ 1.53
MDM1-204ENST00000411698 RB1CC1Q8TDY2 1594 aa24.45■■□□□ 1.51
MDM1-204ENST00000411698 SHROOM4Q9ULL8 1493 aa24.3■■□□□ 1.48
MDM1-204ENST00000411698 SCRIBQ14160 1630 aa24.15■■□□□ 1.46
MDM1-204ENST00000411698 UNC13AQ9UPW8 1703 aa23.88■■□□□ 1.41
MDM1-204ENST00000411698 BICRAQ9NZM4 1560 aa23.68■■□□□ 1.38
MDM1-204ENST00000411698 PABPN1Q86U42 306 aaKnown RBP eCLIP23.57■■□□□ 1.36
MDM1-204ENST00000411698 CECR2Q9BXF3 1484 aa23.36■■□□□ 1.33
MDM1-204ENST00000411698 SUPT5HO00267 1087 aaKnown RBP23.31■■□□□ 1.32
MDM1-204ENST00000411698 BAZ1AQ9NRL2 1556 aaPredicted RBP23.28■■□□□ 1.32
MDM1-204ENST00000411698 RSF1Q96T23 1441 aaPredicted RBP23.26■■□□□ 1.31
MDM1-204ENST00000411698 MROH2BQ7Z745 1585 aa23.22■■□□□ 1.31
MDM1-204ENST00000411698 SMARCA4P51532 1647 aa23.18■■□□□ 1.3
MDM1-204ENST00000411698 WIZO95785 1651 aa23■■□□□ 1.27
MDM1-204ENST00000411698 EIF4G1Q04637 1599 aaKnown RBP22.99■■□□□ 1.27
MDM1-204ENST00000411698 PEG3Q9GZU2 1588 aa22.94■■□□□ 1.26
MDM1-204ENST00000411698 SMARCA2P51531 1590 aa22.87■■□□□ 1.25
MDM1-204ENST00000411698 ATAD2BQ9ULI0 1458 aa22.86■■□□□ 1.25
MDM1-204ENST00000411698 TOP2AP11388 1531 aaKnown RBP22.81■■□□□ 1.24
MDM1-204ENST00000411698 NCAPD3P42695 1498 aa22.73■■□□□ 1.23
MDM1-204ENST00000411698 BAZ1BQ9UIG0 1483 aaKnown RBP22.71■■□□□ 1.23
MDM1-204ENST00000411698 CC2D2AQ9P2K1 1620 aa22.7■■□□□ 1.22
MDM1-204ENST00000411698 HMGXB3Q12766 1538 aa22.68■■□□□ 1.22
MDM1-204ENST00000411698 CCDC88BA6NC98 1476 aa22.55■■□□□ 1.2
MDM1-204ENST00000411698 DNAJC5BQ9UF47 199 aa22.28■■□□□ 1.16
MDM1-204ENST00000411698 CHIC1Q5VXU3 224 aa22.24■■□□□ 1.15
MDM1-204ENST00000411698 CFTRP13569 1480 aa22.15■■□□□ 1.14
MDM1-204ENST00000411698 CADPSQ9ULU8 1353 aa22.12■■□□□ 1.13
MDM1-204ENST00000411698 PRDM2Q13029 1718 aa22■■□□□ 1.11
MDM1-204ENST00000411698 TRIM41Q8WV44 630 aa21.99■■□□□ 1.11
MDM1-204ENST00000411698 LAMC3Q9Y6N6 1575 aa21.99■■□□□ 1.11
MDM1-204ENST00000411698 ABCC8Q09428 1581 aa21.96■■□□□ 1.11
MDM1-204ENST00000411698 NESP48681 1621 aa21.92■■□□□ 1.1
MDM1-204ENST00000411698 WRNQ14191 1432 aaPredicted RBP eCLIP21.91■■□□□ 1.1
MDM1-204ENST00000411698 FANCD2Q9BXW9 1451 aa21.86■■□□□ 1.09
MDM1-204ENST00000411698 PDS5BQ9NTI5 1447 aa21.83■■□□□ 1.09
MDM1-204ENST00000411698 SYNJ1O43426 1573 aa21.79■■□□□ 1.08
MDM1-204ENST00000411698 TOP2BQ02880 1626 aa21.76■■□□□ 1.07
MDM1-204ENST00000411698 CEP164Q9UPV0 1460 aa21.74■■□□□ 1.07
MDM1-204ENST00000411698 BIVM-ERCC5R4GMW8 1640 aa21.74■■□□□ 1.07
MDM1-204ENST00000411698 CUX1P39880 1505 aa21.73■■□□□ 1.07
MDM1-204ENST00000411698 KIF21AQ7Z4S6 1674 aa21.66■■□□□ 1.06
MDM1-204ENST00000411698 DNMBPQ6XZF7 1577 aa21.63■■□□□ 1.05
MDM1-204ENST00000411698 TOPBP1Q92547 1522 aa21.59■■□□□ 1.05
MDM1-204ENST00000411698 URB2Q14146 1524 aaKnown RBP21.57■■□□□ 1.04
MDM1-204ENST00000411698 MRC2Q9UBG0 1479 aa21.54■■□□□ 1.04
MDM1-204ENST00000411698 ERCC6Q03468 1493 aa21.54■■□□□ 1.04
MDM1-204ENST00000411698 EEA1Q15075 1411 aa21.53■■□□□ 1.04
MDM1-204ENST00000411698 FGD5Q6ZNL6 1462 aa21.53■■□□□ 1.04
MDM1-204ENST00000411698 SOGA1O94964 1423 aa21.53■■□□□ 1.04
MDM1-204ENST00000411698 FAM9AQ8IZU1 332 aaPredicted RBP21.5■■□□□ 1.03
MDM1-204ENST00000411698 POLA1P09884 1462 aaPredicted RBP21.46■■□□□ 1.03
MDM1-204ENST00000411698 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
MDM1-204ENST00000411698 WDR62O43379 1518 aa21.44■■□□□ 1.02
MDM1-204ENST00000411698 CSRNP3Q8WYN3 585 aa21.4■■□□□ 1.02
MDM1-204ENST00000411698 KIF27Q86VH2 1401 aa21.4■■□□□ 1.02
MDM1-204ENST00000411698 THOC2Q8NI27 1593 aaKnown RBP21.39■■□□□ 1.02
MDM1-204ENST00000411698 ABCA10Q8WWZ4 1543 aa21.37■■□□□ 1.01
MDM1-204ENST00000411698 RAD54L2Q9Y4B4 1467 aa21.37■■□□□ 1.01
MDM1-204ENST00000411698 CUX2O14529 1486 aa21.35■■□□□ 1.01
MDM1-204ENST00000411698 LOC105371045A0A1W2PR82 267 aa21.33■■□□□ 1.01
MDM1-204ENST00000411698 WDR97A6NE52 1622 aa21.29■■□□□ 1
MDM1-204ENST00000411698 TARBP1Q13395 1621 aaKnown RBP21.29■■□□□ 1
MDM1-204ENST00000411698 IFT140Q96RY7 1462 aa21.26■□□□□ 0.99
MDM1-204ENST00000411698 KIF21BO75037 1637 aa21.22■□□□□ 0.99
MDM1-204ENST00000411698 IGF1RP08069 1367 aa21.21■□□□□ 0.99
MDM1-204ENST00000411698 ABCA5Q8WWZ7 1642 aa21.19■□□□□ 0.98
MDM1-204ENST00000411698 PRXQ9BXM0 1461 aa21.19■□□□□ 0.98
MDM1-204ENST00000411698 TDRD9Q8NDG6 1382 aaKnown RBP21.19■□□□□ 0.98
MDM1-204ENST00000411698 GOLGA3Q08378 1498 aa21.18■□□□□ 0.98
MDM1-204ENST00000411698 GAPVD1Q14C86 1478 aa21.17■□□□□ 0.98
MDM1-204ENST00000411698 EHMT2Q96KQ7 1210 aa21.15■□□□□ 0.98
MDM1-204ENST00000411698 ERICH3Q5RHP9 1530 aa21.14■□□□□ 0.97
MDM1-204ENST00000411698 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
MDM1-204ENST00000411698 CARMIL1Q5VZK9 1371 aa21.1■□□□□ 0.97
MDM1-204ENST00000411698 ZNF608Q9ULD9 1512 aaPredicted RBP21.09■□□□□ 0.97
MDM1-204ENST00000411698 TNIKQ9UKE5 1360 aa21.09■□□□□ 0.97
MDM1-204ENST00000411698 AQRO60306 1485 aaKnown RBP eCLIP21.09■□□□□ 0.97
MDM1-204ENST00000411698 CUL7Q14999 1698 aa21.08■□□□□ 0.97
MDM1-204ENST00000411698 UBTFP17480 764 aaKnown RBP21.07■□□□□ 0.96
MDM1-204ENST00000411698 GRIN2BQ13224 1484 aa21.05■□□□□ 0.96
MDM1-204ENST00000411698 PBRM1Q86U86 1689 aa21.03■□□□□ 0.96
MDM1-204ENST00000411698 EIF4G3O43432 1585 aaKnown RBP21.03■□□□□ 0.96
MDM1-204ENST00000411698 FHAD1B1AJZ9 1412 aa20.95■□□□□ 0.94
MDM1-204ENST00000411698 ADAMTS12P58397 1594 aa20.93■□□□□ 0.94
MDM1-204ENST00000411698 CEP162Q5TB80 1403 aa20.92■□□□□ 0.94
MDM1-204ENST00000411698 MAGI1Q96QZ7 1491 aaPredicted RBP20.91■□□□□ 0.94
MDM1-204ENST00000411698 SNAPC4Q5SXM2 1469 aa20.9■□□□□ 0.94
MDM1-204ENST00000411698 CLIP1P30622 1438 aa20.82■□□□□ 0.92
MDM1-204ENST00000411698 SYNJ2O15056 1496 aa20.82■□□□□ 0.92
MDM1-204ENST00000411698 CTTNBP2Q8WZ74 1663 aa20.78■□□□□ 0.92
MDM1-204ENST00000411698 GRIN2AQ12879 1464 aa20.78■□□□□ 0.92
MDM1-204ENST00000411698 CHMP7Q8WUX9 453 aaPredicted RBP20.77■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms