RNA–Protein interactions for RNA: ENST00000411591.5

PCYT1A-202, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 3

Gene PCYT1A, Length 1,084 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-202ENST00000411591 NISCHQ9Y2I1 1504 aa36.81■■■■□ 3.48
PCYT1A-202ENST00000411591 ABCC9O60706 1549 aa33.72■■■□□ 2.99
PCYT1A-202ENST00000411591 CCDC180Q9P1Z9 1646 aa33.23■■■□□ 2.91
PCYT1A-202ENST00000411591 DNAJC5BQ9UF47 199 aa32.14■■■□□ 2.74
PCYT1A-202ENST00000411591 RB1CC1Q8TDY2 1594 aa31.88■■■□□ 2.69
PCYT1A-202ENST00000411591 NACADO15069 1562 aa31.56■■■□□ 2.64
PCYT1A-202ENST00000411591 PABPN1Q86U42 306 aaKnown RBP eCLIP31.31■■■□□ 2.6
PCYT1A-202ENST00000411591 DCAF8L2P0C7V8 631 aa31.18■■■□□ 2.58
PCYT1A-202ENST00000411591 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
PCYT1A-202ENST00000411591 BICRAQ9NZM4 1560 aa31.01■■■□□ 2.56
PCYT1A-202ENST00000411591 MYO15BQ96JP2 1530 aa31■■■□□ 2.55
PCYT1A-202ENST00000411591 SHROOM4Q9ULL8 1493 aa30.57■■■□□ 2.48
PCYT1A-202ENST00000411591 CECR2Q9BXF3 1484 aa30.45■■■□□ 2.47
PCYT1A-202ENST00000411591 CC2D2AQ9P2K1 1620 aa30.44■■■□□ 2.46
PCYT1A-202ENST00000411591 ZCCHC6Q5VYS8 1495 aaKnown RBP30.42■■■□□ 2.46
PCYT1A-202ENST00000411591 DCAF1Q9Y4B6 1507 aa30.41■■■□□ 2.46
PCYT1A-202ENST00000411591 EIF4G1Q04637 1599 aaKnown RBP30.27■■■□□ 2.44
PCYT1A-202ENST00000411591 SCRIBQ14160 1630 aa30.22■■■□□ 2.43
PCYT1A-202ENST00000411591 DNAJC5Q9H3Z4 198 aa29.88■■■□□ 2.37
PCYT1A-202ENST00000411591 CUX2O14529 1486 aa29.31■■■□□ 2.28
PCYT1A-202ENST00000411591 NCAPD3P42695 1498 aa29.17■■■□□ 2.26
PCYT1A-202ENST00000411591 ERCC6Q03468 1493 aa29.13■■■□□ 2.25
PCYT1A-202ENST00000411591 ATAD2BQ9ULI0 1458 aa28.99■■■□□ 2.23
PCYT1A-202ENST00000411591 HMGXB3Q12766 1538 aa28.89■■■□□ 2.21
PCYT1A-202ENST00000411591 SMARCA2P51531 1590 aa28.86■■■□□ 2.21
PCYT1A-202ENST00000411591 NESP48681 1621 aa28.84■■■□□ 2.21
PCYT1A-202ENST00000411591 SMARCA4P51532 1647 aa28.81■■■□□ 2.2
PCYT1A-202ENST00000411591 THOC2Q8NI27 1593 aaKnown RBP28.67■■■□□ 2.18
PCYT1A-202ENST00000411591 BAZ1BQ9UIG0 1483 aaKnown RBP28.65■■■□□ 2.18
PCYT1A-202ENST00000411591 BAZ1AQ9NRL2 1556 aaPredicted RBP28.59■■■□□ 2.17
PCYT1A-202ENST00000411591 PEG3Q9GZU2 1588 aa28.58■■■□□ 2.17
PCYT1A-202ENST00000411591 LAMC3Q9Y6N6 1575 aa28.55■■■□□ 2.16
PCYT1A-202ENST00000411591 PDS5BQ9NTI5 1447 aa28.41■■■□□ 2.14
PCYT1A-202ENST00000411591 KIF21AQ7Z4S6 1674 aa28.41■■■□□ 2.14
PCYT1A-202ENST00000411591 MROH2BQ7Z745 1585 aa28.36■■■□□ 2.13
PCYT1A-202ENST00000411591 TRIM41Q8WV44 630 aa28.28■■■□□ 2.12
PCYT1A-202ENST00000411591 CADPSQ9ULU8 1353 aa28.24■■■□□ 2.11
PCYT1A-202ENST00000411591 MRC2Q9UBG0 1479 aa28.21■■■□□ 2.11
PCYT1A-202ENST00000411591 WDR62O43379 1518 aa28.17■■■□□ 2.1
PCYT1A-202ENST00000411591 CEP164Q9UPV0 1460 aa27.97■■■□□ 2.07
PCYT1A-202ENST00000411591 WIZO95785 1651 aa27.96■■■□□ 2.07
PCYT1A-202ENST00000411591 FANCD2Q9BXW9 1451 aa27.9■■■□□ 2.06
PCYT1A-202ENST00000411591 OSCARQ8IYS5 282 aa27.85■■■□□ 2.05
PCYT1A-202ENST00000411591 CFTRP13569 1480 aa27.83■■■□□ 2.04
PCYT1A-202ENST00000411591 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
PCYT1A-202ENST00000411591 TOP2AP11388 1531 aaKnown RBP27.6■■■□□ 2.01
PCYT1A-202ENST00000411591 RSF1Q96T23 1441 aaPredicted RBP27.59■■■□□ 2.01
PCYT1A-202ENST00000411591 RIMBP3CA6NJZ7 1639 aa27.55■■■□□ 2
PCYT1A-202ENST00000411591 RIMBP3BA6NNM3 1639 aa27.55■■■□□ 2
PCYT1A-202ENST00000411591 RIMBP3Q9UFD9 1639 aa27.55■■■□□ 2
PCYT1A-202ENST00000411591 ZNF608Q9ULD9 1512 aaPredicted RBP27.46■■□□□ 1.99
PCYT1A-202ENST00000411591 IFT140Q96RY7 1462 aa27.45■■□□□ 1.99
PCYT1A-202ENST00000411591 ARHGEF11O15085 1522 aa27.43■■□□□ 1.98
PCYT1A-202ENST00000411591 PRDM2Q13029 1718 aa27.41■■□□□ 1.98
PCYT1A-202ENST00000411591 TOPBP1Q92547 1522 aa27.32■■□□□ 1.96
PCYT1A-202ENST00000411591 CCDC88BA6NC98 1476 aa27.29■■□□□ 1.96
PCYT1A-202ENST00000411591 EIF4G3O43432 1585 aaKnown RBP27.26■■□□□ 1.95
PCYT1A-202ENST00000411591 CYB5RLQ6IPT4 315 aa27.22■■□□□ 1.95
PCYT1A-202ENST00000411591 ABCC8Q09428 1581 aa27.22■■□□□ 1.95
PCYT1A-202ENST00000411591 DNMBPQ6XZF7 1577 aa27.17■■□□□ 1.94
PCYT1A-202ENST00000411591 ARAP1Q96P48 1450 aa27.14■■□□□ 1.94
PCYT1A-202ENST00000411591 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.937e-8■■■■□ 23.6
PCYT1A-202ENST00000411591 CHD1O14646 1710 aa27.12■■□□□ 1.93
PCYT1A-202ENST00000411591 TARBP1Q13395 1621 aaKnown RBP27.12■■□□□ 1.93
PCYT1A-202ENST00000411591 TRHP20396 242 aaPredicted RBP27.05■■□□□ 1.92
PCYT1A-202ENST00000411591 POLA1P09884 1462 aaPredicted RBP27.02■■□□□ 1.92
PCYT1A-202ENST00000411591 FBLN2P98095 1184 aa26.99■■□□□ 1.91
PCYT1A-202ENST00000411591 RAD54L2Q9Y4B4 1467 aa26.92■■□□□ 1.9
PCYT1A-202ENST00000411591 TDRD9Q8NDG6 1382 aaKnown RBP26.88■■□□□ 1.89
PCYT1A-202ENST00000411591 CLASP1Q7Z460 1538 aa26.87■■□□□ 1.89
PCYT1A-202ENST00000411591 SOGA1O94964 1423 aa26.87■■□□□ 1.89
PCYT1A-202ENST00000411591 SNAPC4Q5SXM2 1469 aa26.85■■□□□ 1.89
PCYT1A-202ENST00000411591 WDR97A6NE52 1622 aa26.82■■□□□ 1.88
PCYT1A-202ENST00000411591 SYNJ1O43426 1573 aa26.76■■□□□ 1.87
PCYT1A-202ENST00000411591 FGD5Q6ZNL6 1462 aa26.76■■□□□ 1.87
PCYT1A-202ENST00000411591 MAGI1Q96QZ7 1491 aaPredicted RBP26.76■■□□□ 1.87
PCYT1A-202ENST00000411591 CHMP7Q8WUX9 453 aaPredicted RBP26.74■■□□□ 1.87
PCYT1A-202ENST00000411591 GRIN2BQ13224 1484 aa26.7■■□□□ 1.87
PCYT1A-202ENST00000411591 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
PCYT1A-202ENST00000411591 CUX1P39880 1505 aa26.66■■□□□ 1.86
PCYT1A-202ENST00000411591 AEBP2Q6ZN18 517 aaPredicted RBP26.62■■□□□ 1.85
PCYT1A-202ENST00000411591 GAPVD1Q14C86 1478 aa26.59■■□□□ 1.85
PCYT1A-202ENST00000411591 PBRM1Q86U86 1689 aa26.51■■□□□ 1.83
PCYT1A-202ENST00000411591 ABCA10Q8WWZ4 1543 aa26.45■■□□□ 1.83
PCYT1A-202ENST00000411591 ABCA5Q8WWZ7 1642 aa26.44■■□□□ 1.82
PCYT1A-202ENST00000411591 ERCC6L2Q5T890 1561 aa26.4■■□□□ 1.82
PCYT1A-202ENST00000411591 GRIN2AQ12879 1464 aa26.36■■□□□ 1.81
PCYT1A-202ENST00000411591 NUP160Q12769 1436 aa26.32■■□□□ 1.8
PCYT1A-202ENST00000411591 CEP170Q5SW79 1584 aa26.31■■□□□ 1.8
PCYT1A-202ENST00000411591 ADAMTS12P58397 1594 aa26.29■■□□□ 1.8
PCYT1A-202ENST00000411591 SHROOM2Q13796 1616 aa26.25■■□□□ 1.79
PCYT1A-202ENST00000411591 WRNQ14191 1432 aaPredicted RBP eCLIP26.22■■□□□ 1.79
PCYT1A-202ENST00000411591 FHAD1B1AJZ9 1412 aa26.19■■□□□ 1.78
PCYT1A-202ENST00000411591 KIF13AQ9H1H9 1805 aa26.13■■□□□ 1.77
PCYT1A-202ENST00000411591 ERICH3Q5RHP9 1530 aa26.09■■□□□ 1.77
PCYT1A-202ENST00000411591 TOP2BQ02880 1626 aa26.09■■□□□ 1.77
PCYT1A-202ENST00000411591 BIVM-ERCC5R4GMW8 1640 aa26.09■■□□□ 1.77
PCYT1A-202ENST00000411591 PRG4Q92954 1404 aaPredicted RBP26.06■■□□□ 1.76
PCYT1A-202ENST00000411591 JPH4Q96JJ6 628 aa26.01■■□□□ 1.75
PCYT1A-202ENST00000411591 ABCC10Q5T3U5 1492 aa25.99■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms