RNA–Protein interactions for RNA: ENST00000411577.5

ERGIC3-204, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 601 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-204ENST00000411577 NISCHQ9Y2I1 1504 aa22.23■■□□□ 1.15
ERGIC3-204ENST00000411577 CCDC180Q9P1Z9 1646 aa19.7■□□□□ 0.74
ERGIC3-204ENST00000411577 ABCC9O60706 1549 aa19.34■□□□□ 0.69
ERGIC3-204ENST00000411577 AEBP2Q6ZN18 517 aaPredicted RBP18.85■□□□□ 0.61
ERGIC3-204ENST00000411577 DNAJC5BQ9UF47 199 aa18.82■□□□□ 0.6
ERGIC3-204ENST00000411577 DCAF8L2P0C7V8 631 aa18.67■□□□□ 0.58
ERGIC3-204ENST00000411577 RB1CC1Q8TDY2 1594 aa18.6■□□□□ 0.57
ERGIC3-204ENST00000411577 NACADO15069 1562 aa18.59■□□□□ 0.57
ERGIC3-204ENST00000411577 MYO15BQ96JP2 1530 aa18.51■□□□□ 0.55
ERGIC3-204ENST00000411577 ZCCHC6Q5VYS8 1495 aaKnown RBP18.49■□□□□ 0.55
ERGIC3-204ENST00000411577 DCAF1Q9Y4B6 1507 aa18.41■□□□□ 0.54
ERGIC3-204ENST00000411577 PABPN1Q86U42 306 aaKnown RBP eCLIP18.12■□□□□ 0.49
ERGIC3-204ENST00000411577 UNC13AQ9UPW8 1703 aa18.03■□□□□ 0.48
ERGIC3-204ENST00000411577 BICRAQ9NZM4 1560 aa17.99■□□□□ 0.47
ERGIC3-204ENST00000411577 SCRIBQ14160 1630 aa17.97■□□□□ 0.47
ERGIC3-204ENST00000411577 DNAJC5Q9H3Z4 198 aa17.94■□□□□ 0.46
ERGIC3-204ENST00000411577 SHROOM4Q9ULL8 1493 aa17.88■□□□□ 0.45
ERGIC3-204ENST00000411577 CHIC1Q5VXU3 224 aa17.59■□□□□ 0.41
ERGIC3-204ENST00000411577 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
ERGIC3-204ENST00000411577 CC2D2AQ9P2K1 1620 aa17.46■□□□□ 0.39
ERGIC3-204ENST00000411577 CECR2Q9BXF3 1484 aa17.4■□□□□ 0.38
ERGIC3-204ENST00000411577 BAZ1AQ9NRL2 1556 aaPredicted RBP17.23■□□□□ 0.35
ERGIC3-204ENST00000411577 SMARCA4P51532 1647 aa17.21■□□□□ 0.35
ERGIC3-204ENST00000411577 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
ERGIC3-204ENST00000411577 ATAD2BQ9ULI0 1458 aa17.18■□□□□ 0.34
ERGIC3-204ENST00000411577 SMARCA2P51531 1590 aa17.15■□□□□ 0.34
ERGIC3-204ENST00000411577 MROH2BQ7Z745 1585 aa17.11■□□□□ 0.33
ERGIC3-204ENST00000411577 PEG3Q9GZU2 1588 aa17.06■□□□□ 0.32
ERGIC3-204ENST00000411577 HMGXB3Q12766 1538 aa17.05■□□□□ 0.32
ERGIC3-204ENST00000411577 BAZ1BQ9UIG0 1483 aaKnown RBP17.03■□□□□ 0.32
ERGIC3-204ENST00000411577 RSF1Q96T23 1441 aaPredicted RBP16.96■□□□□ 0.3
ERGIC3-204ENST00000411577 TRIM41Q8WV44 630 aa16.88■□□□□ 0.29
ERGIC3-204ENST00000411577 WIZO95785 1651 aa16.88■□□□□ 0.29
ERGIC3-204ENST00000411577 CUX2O14529 1486 aa16.86■□□□□ 0.29
ERGIC3-204ENST00000411577 TOP2AP11388 1531 aaKnown RBP16.75■□□□□ 0.27
ERGIC3-204ENST00000411577 CADPSQ9ULU8 1353 aa16.71■□□□□ 0.27
ERGIC3-204ENST00000411577 NESP48681 1621 aa16.7■□□□□ 0.26
ERGIC3-204ENST00000411577 ERCC6Q03468 1493 aa16.69■□□□□ 0.26
ERGIC3-204ENST00000411577 LAMC3Q9Y6N6 1575 aa16.68■□□□□ 0.26
ERGIC3-204ENST00000411577 PDS5BQ9NTI5 1447 aa16.65■□□□□ 0.26
ERGIC3-204ENST00000411577 CCDC88BA6NC98 1476 aa16.59■□□□□ 0.25
ERGIC3-204ENST00000411577 CFTRP13569 1480 aa16.57■□□□□ 0.24
ERGIC3-204ENST00000411577 SUPT5HO00267 1087 aaKnown RBP16.57■□□□□ 0.24
ERGIC3-204ENST00000411577 FANCD2Q9BXW9 1451 aa16.47■□□□□ 0.23
ERGIC3-204ENST00000411577 CEP164Q9UPV0 1460 aa16.44■□□□□ 0.22
ERGIC3-204ENST00000411577 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
ERGIC3-204ENST00000411577 MRC2Q9UBG0 1479 aa16.42■□□□□ 0.22
ERGIC3-204ENST00000411577 THOC2Q8NI27 1593 aaKnown RBP16.41■□□□□ 0.22
ERGIC3-204ENST00000411577 WDR62O43379 1518 aa16.34■□□□□ 0.21
ERGIC3-204ENST00000411577 PRDM2Q13029 1718 aa16.29■□□□□ 0.2
ERGIC3-204ENST00000411577 URB2Q14146 1524 aaKnown RBP16.28■□□□□ 0.2
ERGIC3-204ENST00000411577 ABCC8Q09428 1581 aa16.26■□□□□ 0.19
ERGIC3-204ENST00000411577 TOPBP1Q92547 1522 aa16.19■□□□□ 0.18
ERGIC3-204ENST00000411577 DNMBPQ6XZF7 1577 aa16.16■□□□□ 0.18
ERGIC3-204ENST00000411577 IFT140Q96RY7 1462 aa16.13■□□□□ 0.17
ERGIC3-204ENST00000411577 OSCARQ8IYS5 282 aa16.11■□□□□ 0.17
ERGIC3-204ENST00000411577 POLA1P09884 1462 aaPredicted RBP16.05■□□□□ 0.16
ERGIC3-204ENST00000411577 CUX1P39880 1505 aa16.04■□□□□ 0.16
ERGIC3-204ENST00000411577 SOGA1O94964 1423 aa16.04■□□□□ 0.16
ERGIC3-204ENST00000411577 ZNF608Q9ULD9 1512 aaPredicted RBP16.01■□□□□ 0.15
ERGIC3-204ENST00000411577 FGD5Q6ZNL6 1462 aa16.01■□□□□ 0.15
ERGIC3-204ENST00000411577 WRNQ14191 1432 aaPredicted RBP eCLIP16■□□□□ 0.15
ERGIC3-204ENST00000411577 SENP3Q9H4L4 574 aaPredicted RBP15.99■□□□□ 0.15
ERGIC3-204ENST00000411577 RAD54L2Q9Y4B4 1467 aa15.98■□□□□ 0.15
ERGIC3-204ENST00000411577 TARBP1Q13395 1621 aaKnown RBP15.97■□□□□ 0.15
ERGIC3-204ENST00000411577 TRHP20396 242 aaPredicted RBP15.96■□□□□ 0.15
ERGIC3-204ENST00000411577 AQRO60306 1485 aaKnown RBP eCLIP15.96■□□□□ 0.143e-8■■■■□ 19.7
ERGIC3-204ENST00000411577 TDRD9Q8NDG6 1382 aaKnown RBP15.94■□□□□ 0.14
ERGIC3-204ENST00000411577 TOP2BQ02880 1626 aa15.9■□□□□ 0.14
ERGIC3-204ENST00000411577 EIF4G3O43432 1585 aaKnown RBP15.89■□□□□ 0.13
ERGIC3-204ENST00000411577 WDR97A6NE52 1622 aa15.89■□□□□ 0.13
ERGIC3-204ENST00000411577 ABCA10Q8WWZ4 1543 aa15.88■□□□□ 0.13
ERGIC3-204ENST00000411577 BIVM-ERCC5R4GMW8 1640 aa15.87■□□□□ 0.13
ERGIC3-204ENST00000411577 SYNJ1O43426 1573 aa15.87■□□□□ 0.13
ERGIC3-204ENST00000411577 GRIN2BQ13224 1484 aa15.84■□□□□ 0.13
ERGIC3-204ENST00000411577 GAPVD1Q14C86 1478 aa15.83■□□□□ 0.12
ERGIC3-204ENST00000411577 FBLN2P98095 1184 aa15.82■□□□□ 0.12
ERGIC3-204ENST00000411577 CYB5RLQ6IPT4 315 aa15.82■□□□□ 0.12
ERGIC3-204ENST00000411577 PHF23Q9BUL5 403 aaPredicted RBP15.82■□□□□ 0.12
ERGIC3-204ENST00000411577 CHMP7Q8WUX9 453 aaPredicted RBP15.79■□□□□ 0.12
ERGIC3-204ENST00000411577 RIMBP3CA6NJZ7 1639 aa15.79■□□□□ 0.12
ERGIC3-204ENST00000411577 RIMBP3BA6NNM3 1639 aa15.79■□□□□ 0.12
ERGIC3-204ENST00000411577 RIMBP3Q9UFD9 1639 aa15.79■□□□□ 0.12
ERGIC3-204ENST00000411577 MAGI1Q96QZ7 1491 aaPredicted RBP15.78■□□□□ 0.12
ERGIC3-204ENST00000411577 SNAPC4Q5SXM2 1469 aa15.78■□□□□ 0.12
ERGIC3-204ENST00000411577 ABCA5Q8WWZ7 1642 aa15.75■□□□□ 0.11
ERGIC3-204ENST00000411577 SYNJ2O15056 1496 aa15.72■□□□□ 0.11
ERGIC3-204ENST00000411577 ARHGEF11O15085 1522 aa15.69■□□□□ 0.1
ERGIC3-204ENST00000411577 KIF27Q86VH2 1401 aa15.68■□□□□ 0.1
ERGIC3-204ENST00000411577 ERICH3Q5RHP9 1530 aa15.68■□□□□ 0.1
ERGIC3-204ENST00000411577 PBRM1Q86U86 1689 aa15.67■□□□□ 0.1
ERGIC3-204ENST00000411577 FHAD1B1AJZ9 1412 aa15.67■□□□□ 0.1
ERGIC3-204ENST00000411577 CHD1O14646 1710 aa15.65■□□□□ 0.1
ERGIC3-204ENST00000411577 IGF1RP08069 1367 aa15.63■□□□□ 0.09
ERGIC3-204ENST00000411577 GRIN2AQ12879 1464 aa15.6■□□□□ 0.09
ERGIC3-204ENST00000411577 ADAMTS12P58397 1594 aa15.6■□□□□ 0.09
ERGIC3-204ENST00000411577 CLASP1Q7Z460 1538 aa15.56■□□□□ 0.08
ERGIC3-204ENST00000411577 NUP160Q12769 1436 aa15.55■□□□□ 0.08
ERGIC3-204ENST00000411577 CARMIL1Q5VZK9 1371 aa15.54■□□□□ 0.08
ERGIC3-204ENST00000411577 ILDR1Q86SU0 546 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms