RNA–Protein interactions for RNA: ENST00000411037.1

RN7SKP8-201, Transcript of RNA, 7SK small nuclear pseudogene 8, humanhuman

BASIC

Gene RN7SKP8, Length 358 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP8-201ENST00000411037 NISCHQ9Y2I1 1504 aa26.05■■□□□ 1.76
RN7SKP8-201ENST00000411037 ABCC9O60706 1549 aa23.48■■□□□ 1.35
RN7SKP8-201ENST00000411037 CCDC180Q9P1Z9 1646 aa23.33■■□□□ 1.32
RN7SKP8-201ENST00000411037 RB1CC1Q8TDY2 1594 aa22.28■■□□□ 1.16
RN7SKP8-201ENST00000411037 DCAF8L2P0C7V8 631 aa22.27■■□□□ 1.16
RN7SKP8-201ENST00000411037 NACADO15069 1562 aa22.1■■□□□ 1.13
RN7SKP8-201ENST00000411037 DNAJC5BQ9UF47 199 aa22.01■■□□□ 1.11
RN7SKP8-201ENST00000411037 PABPN1Q86U42 306 aaKnown RBP eCLIP21.93■■□□□ 1.1
RN7SKP8-201ENST00000411037 UNC13AQ9UPW8 1703 aa21.75■■□□□ 1.07
RN7SKP8-201ENST00000411037 MYO15BQ96JP2 1530 aa21.71■■□□□ 1.07
RN7SKP8-201ENST00000411037 BICRAQ9NZM4 1560 aa21.57■■□□□ 1.04
RN7SKP8-201ENST00000411037 ZCCHC6Q5VYS8 1495 aaKnown RBP21.56■■□□□ 1.04
RN7SKP8-201ENST00000411037 DCAF1Q9Y4B6 1507 aa21.44■■□□□ 1.02
RN7SKP8-201ENST00000411037 SCRIBQ14160 1630 aa21.37■■□□□ 1.01
RN7SKP8-201ENST00000411037 SHROOM4Q9ULL8 1493 aa21.23■□□□□ 0.99
RN7SKP8-201ENST00000411037 CC2D2AQ9P2K1 1620 aa21.15■□□□□ 0.98
RN7SKP8-201ENST00000411037 CECR2Q9BXF3 1484 aa21.13■□□□□ 0.97
RN7SKP8-201ENST00000411037 EIF4G1Q04637 1599 aaKnown RBP21.09■□□□□ 0.97
RN7SKP8-201ENST00000411037 NCAPD3P42695 1498 aa20.39■□□□□ 0.85
RN7SKP8-201ENST00000411037 ATAD2BQ9ULI0 1458 aa20.36■□□□□ 0.85
RN7SKP8-201ENST00000411037 SMARCA4P51532 1647 aa20.33■□□□□ 0.84
RN7SKP8-201ENST00000411037 ERCC6Q03468 1493 aa20.3■□□□□ 0.84
RN7SKP8-201ENST00000411037 SMARCA2P51531 1590 aa20.29■□□□□ 0.84
RN7SKP8-201ENST00000411037 BAZ1AQ9NRL2 1556 aaPredicted RBP20.23■□□□□ 0.83
RN7SKP8-201ENST00000411037 DNAJC5Q9H3Z4 198 aa20.22■□□□□ 0.83
RN7SKP8-201ENST00000411037 HMGXB3Q12766 1538 aa20.22■□□□□ 0.83
RN7SKP8-201ENST00000411037 BAZ1BQ9UIG0 1483 aaKnown RBP20.19■□□□□ 0.82
RN7SKP8-201ENST00000411037 CUX2O14529 1486 aa20.16■□□□□ 0.82
RN7SKP8-201ENST00000411037 NESP48681 1621 aa20.14■□□□□ 0.81
RN7SKP8-201ENST00000411037 MROH2BQ7Z745 1585 aa20.09■□□□□ 0.81
RN7SKP8-201ENST00000411037 PEG3Q9GZU2 1588 aa20.05■□□□□ 0.8
RN7SKP8-201ENST00000411037 LAMC3Q9Y6N6 1575 aa19.95■□□□□ 0.78
RN7SKP8-201ENST00000411037 PDS5BQ9NTI5 1447 aa19.89■□□□□ 0.77
RN7SKP8-201ENST00000411037 WIZO95785 1651 aa19.88■□□□□ 0.77
RN7SKP8-201ENST00000411037 KIF21AQ7Z4S6 1674 aa19.86■□□□□ 0.77
RN7SKP8-201ENST00000411037 THOC2Q8NI27 1593 aaKnown RBP19.86■□□□□ 0.77
RN7SKP8-201ENST00000411037 CADPSQ9ULU8 1353 aa19.83■□□□□ 0.76
RN7SKP8-201ENST00000411037 MRC2Q9UBG0 1479 aa19.68■□□□□ 0.74
RN7SKP8-201ENST00000411037 RSF1Q96T23 1441 aaPredicted RBP19.68■□□□□ 0.74
RN7SKP8-201ENST00000411037 CEP164Q9UPV0 1460 aa19.62■□□□□ 0.73
RN7SKP8-201ENST00000411037 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
RN7SKP8-201ENST00000411037 WDR62O43379 1518 aa19.6■□□□□ 0.73
RN7SKP8-201ENST00000411037 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
RN7SKP8-201ENST00000411037 CFTRP13569 1480 aa19.56■□□□□ 0.72
RN7SKP8-201ENST00000411037 TRIM41Q8WV44 630 aa19.47■□□□□ 0.71
RN7SKP8-201ENST00000411037 URB2Q14146 1524 aaKnown RBP19.41■□□□□ 0.7
RN7SKP8-201ENST00000411037 CCDC88BA6NC98 1476 aa19.4■□□□□ 0.7
RN7SKP8-201ENST00000411037 OSCARQ8IYS5 282 aa19.36■□□□□ 0.69
RN7SKP8-201ENST00000411037 PRDM2Q13029 1718 aa19.34■□□□□ 0.69
RN7SKP8-201ENST00000411037 IFT140Q96RY7 1462 aa19.22■□□□□ 0.67
RN7SKP8-201ENST00000411037 TOPBP1Q92547 1522 aa19.21■□□□□ 0.67
RN7SKP8-201ENST00000411037 ZNF608Q9ULD9 1512 aaPredicted RBP19.2■□□□□ 0.66
RN7SKP8-201ENST00000411037 ABCC8Q09428 1581 aa19.17■□□□□ 0.66
RN7SKP8-201ENST00000411037 DNMBPQ6XZF7 1577 aa19.13■□□□□ 0.65
RN7SKP8-201ENST00000411037 FBLN2P98095 1184 aa19.07■□□□□ 0.64
RN7SKP8-201ENST00000411037 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.64
RN7SKP8-201ENST00000411037 EIF4G3O43432 1585 aaKnown RBP19.06■□□□□ 0.64
RN7SKP8-201ENST00000411037 RIMBP3CA6NJZ7 1639 aa19.02■□□□□ 0.64
RN7SKP8-201ENST00000411037 RIMBP3BA6NNM3 1639 aa19.02■□□□□ 0.64
RN7SKP8-201ENST00000411037 RIMBP3Q9UFD9 1639 aa19.02■□□□□ 0.64
RN7SKP8-201ENST00000411037 POLA1P09884 1462 aaPredicted RBP19.02■□□□□ 0.63
RN7SKP8-201ENST00000411037 SUPT5HO00267 1087 aaKnown RBP19■□□□□ 0.63
RN7SKP8-201ENST00000411037 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
RN7SKP8-201ENST00000411037 TARBP1Q13395 1621 aaKnown RBP19■□□□□ 0.63
RN7SKP8-201ENST00000411037 SOGA1O94964 1423 aa18.99■□□□□ 0.63
RN7SKP8-201ENST00000411037 TDRD9Q8NDG6 1382 aaKnown RBP18.96■□□□□ 0.63
RN7SKP8-201ENST00000411037 ARHGEF11O15085 1522 aa18.95■□□□□ 0.62
RN7SKP8-201ENST00000411037 CHD1O14646 1710 aa18.95■□□□□ 0.62
RN7SKP8-201ENST00000411037 CYB5RLQ6IPT4 315 aa18.95■□□□□ 0.62
RN7SKP8-201ENST00000411037 FGD5Q6ZNL6 1462 aa18.92■□□□□ 0.62
RN7SKP8-201ENST00000411037 CHMP7Q8WUX9 453 aaPredicted RBP18.88■□□□□ 0.61
RN7SKP8-201ENST00000411037 CUX1P39880 1505 aa18.87■□□□□ 0.61
RN7SKP8-201ENST00000411037 SNAPC4Q5SXM2 1469 aa18.85■□□□□ 0.61
RN7SKP8-201ENST00000411037 TRHP20396 242 aaPredicted RBP18.8■□□□□ 0.6
RN7SKP8-201ENST00000411037 WDR97A6NE52 1622 aa18.78■□□□□ 0.6
RN7SKP8-201ENST00000411037 GRIN2BQ13224 1484 aa18.78■□□□□ 0.6
RN7SKP8-201ENST00000411037 MAGI1Q96QZ7 1491 aaPredicted RBP18.77■□□□□ 0.59
RN7SKP8-201ENST00000411037 ARAP1Q96P48 1450 aa18.76■□□□□ 0.59
RN7SKP8-201ENST00000411037 SYNJ1O43426 1573 aa18.73■□□□□ 0.59
RN7SKP8-201ENST00000411037 GAPVD1Q14C86 1478 aa18.73■□□□□ 0.59
RN7SKP8-201ENST00000411037 SYNJ2O15056 1496 aa18.71■□□□□ 0.59
RN7SKP8-201ENST00000411037 PBRM1Q86U86 1689 aa18.69■□□□□ 0.58
RN7SKP8-201ENST00000411037 CLASP1Q7Z460 1538 aa18.67■□□□□ 0.58
RN7SKP8-201ENST00000411037 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
RN7SKP8-201ENST00000411037 WRNQ14191 1432 aaPredicted RBP eCLIP18.64■□□□□ 0.57
RN7SKP8-201ENST00000411037 ABCA5Q8WWZ7 1642 aa18.61■□□□□ 0.57
RN7SKP8-201ENST00000411037 TOP2BQ02880 1626 aa18.56■□□□□ 0.56
RN7SKP8-201ENST00000411037 BIVM-ERCC5R4GMW8 1640 aa18.54■□□□□ 0.56
RN7SKP8-201ENST00000411037 GRIN2AQ12879 1464 aa18.52■□□□□ 0.56
RN7SKP8-201ENST00000411037 ADAMTS12P58397 1594 aa18.49■□□□□ 0.55
RN7SKP8-201ENST00000411037 FHAD1B1AJZ9 1412 aa18.49■□□□□ 0.55
RN7SKP8-201ENST00000411037 CEP170Q5SW79 1584 aa18.45■□□□□ 0.54
RN7SKP8-201ENST00000411037 ERCC6L2Q5T890 1561 aa18.44■□□□□ 0.54
RN7SKP8-201ENST00000411037 NUP160Q12769 1436 aa18.44■□□□□ 0.54
RN7SKP8-201ENST00000411037 ERICH3Q5RHP9 1530 aa18.43■□□□□ 0.54
RN7SKP8-201ENST00000411037 JPH4Q96JJ6 628 aa18.37■□□□□ 0.53
RN7SKP8-201ENST00000411037 PRG4Q92954 1404 aaPredicted RBP18.34■□□□□ 0.53
RN7SKP8-201ENST00000411037 SHROOM2Q13796 1616 aa18.33■□□□□ 0.52
RN7SKP8-201ENST00000411037 AEBP2Q6ZN18 517 aaPredicted RBP18.27■□□□□ 0.52
RN7SKP8-201ENST00000411037 KIF27Q86VH2 1401 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms