RNA–Protein interactions for RNA: ENST00000410773.1

RN7SKP39-201, Transcript of RNA, 7SK small nuclear pseudogene 39, humanhuman

BASIC

Gene RN7SKP39, Length 322 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP39-201ENST00000410773 NISCHQ9Y2I1 1504 aa20.43■□□□□ 0.86
RN7SKP39-201ENST00000410773 ABCC9O60706 1549 aa19.22■□□□□ 0.67
RN7SKP39-201ENST00000410773 CCDC180Q9P1Z9 1646 aa18.66■□□□□ 0.58
RN7SKP39-201ENST00000410773 DNAJC5BQ9UF47 199 aa18.56■□□□□ 0.56
RN7SKP39-201ENST00000410773 RB1CC1Q8TDY2 1594 aa18.03■□□□□ 0.48
RN7SKP39-201ENST00000410773 PABPN1Q86U42 306 aaKnown RBP eCLIP17.75■□□□□ 0.43
RN7SKP39-201ENST00000410773 NACADO15069 1562 aa17.74■□□□□ 0.43
RN7SKP39-201ENST00000410773 UNC13AQ9UPW8 1703 aa17.7■□□□□ 0.42
RN7SKP39-201ENST00000410773 BICRAQ9NZM4 1560 aa17.56■□□□□ 0.4
RN7SKP39-201ENST00000410773 DNAJC5Q9H3Z4 198 aa17.48■□□□□ 0.39
RN7SKP39-201ENST00000410773 DCAF8L2P0C7V8 631 aa17.43■□□□□ 0.38
RN7SKP39-201ENST00000410773 CECR2Q9BXF3 1484 aa17.37■□□□□ 0.37
RN7SKP39-201ENST00000410773 CC2D2AQ9P2K1 1620 aa17.36■□□□□ 0.37
RN7SKP39-201ENST00000410773 MYO15BQ96JP2 1530 aa17.28■□□□□ 0.36
RN7SKP39-201ENST00000410773 SHROOM4Q9ULL8 1493 aa17.22■□□□□ 0.35
RN7SKP39-201ENST00000410773 EIF4G1Q04637 1599 aaKnown RBP17.16■□□□□ 0.34
RN7SKP39-201ENST00000410773 SCRIBQ14160 1630 aa16.96■□□□□ 0.3
RN7SKP39-201ENST00000410773 DCAF1Q9Y4B6 1507 aa16.84■□□□□ 0.29
RN7SKP39-201ENST00000410773 ZCCHC6Q5VYS8 1495 aaKnown RBP16.82■□□□□ 0.28
RN7SKP39-201ENST00000410773 CUX2O14529 1486 aa16.81■□□□□ 0.28
RN7SKP39-201ENST00000410773 ERCC6Q03468 1493 aa16.62■□□□□ 0.25
RN7SKP39-201ENST00000410773 TRIM41Q8WV44 630 aa16.46■□□□□ 0.23
RN7SKP39-201ENST00000410773 NCAPD3P42695 1498 aa16.37■□□□□ 0.21
RN7SKP39-201ENST00000410773 THOC2Q8NI27 1593 aaKnown RBP16.35■□□□□ 0.21
RN7SKP39-201ENST00000410773 NESP48681 1621 aa16.35■□□□□ 0.21
RN7SKP39-201ENST00000410773 ATAD2BQ9ULI0 1458 aa16.24■□□□□ 0.19
RN7SKP39-201ENST00000410773 HMGXB3Q12766 1538 aa16.23■□□□□ 0.19
RN7SKP39-201ENST00000410773 SMARCA2P51531 1590 aa16.19■□□□□ 0.18
RN7SKP39-201ENST00000410773 KIF21AQ7Z4S6 1674 aa16.17■□□□□ 0.18
RN7SKP39-201ENST00000410773 LAMC3Q9Y6N6 1575 aa16.13■□□□□ 0.17
RN7SKP39-201ENST00000410773 SMARCA4P51532 1647 aa16.11■□□□□ 0.17
RN7SKP39-201ENST00000410773 BAZ1BQ9UIG0 1483 aaKnown RBP16.05■□□□□ 0.16
RN7SKP39-201ENST00000410773 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
RN7SKP39-201ENST00000410773 PDS5BQ9NTI5 1447 aa16.02■□□□□ 0.15
RN7SKP39-201ENST00000410773 WDR62O43379 1518 aa15.95■□□□□ 0.14
RN7SKP39-201ENST00000410773 MRC2Q9UBG0 1479 aa15.95■□□□□ 0.14
RN7SKP39-201ENST00000410773 PEG3Q9GZU2 1588 aa15.95■□□□□ 0.14
RN7SKP39-201ENST00000410773 OSCARQ8IYS5 282 aa15.88■□□□□ 0.13
RN7SKP39-201ENST00000410773 RIMBP3CA6NJZ7 1639 aa15.85■□□□□ 0.13
RN7SKP39-201ENST00000410773 RIMBP3BA6NNM3 1639 aa15.85■□□□□ 0.13
RN7SKP39-201ENST00000410773 RIMBP3Q9UFD9 1639 aa15.85■□□□□ 0.13
RN7SKP39-201ENST00000410773 CADPSQ9ULU8 1353 aa15.83■□□□□ 0.12
RN7SKP39-201ENST00000410773 CEP164Q9UPV0 1460 aa15.76■□□□□ 0.11
RN7SKP39-201ENST00000410773 MROH2BQ7Z745 1585 aa15.75■□□□□ 0.11
RN7SKP39-201ENST00000410773 ARHGEF11O15085 1522 aa15.72■□□□□ 0.11
RN7SKP39-201ENST00000410773 FANCD2Q9BXW9 1451 aa15.68■□□□□ 0.1
RN7SKP39-201ENST00000410773 URB2Q14146 1524 aaKnown RBP15.61■□□□□ 0.09
RN7SKP39-201ENST00000410773 TRHP20396 242 aaPredicted RBP15.59■□□□□ 0.09
RN7SKP39-201ENST00000410773 AEBP2Q6ZN18 517 aaPredicted RBP15.59■□□□□ 0.09
RN7SKP39-201ENST00000410773 CYB5RLQ6IPT4 315 aa15.56■□□□□ 0.08
RN7SKP39-201ENST00000410773 WIZO95785 1651 aa15.55■□□□□ 0.08
RN7SKP39-201ENST00000410773 CFTRP13569 1480 aa15.54■□□□□ 0.08
RN7SKP39-201ENST00000410773 ZNF608Q9ULD9 1512 aaPredicted RBP15.52■□□□□ 0.07
RN7SKP39-201ENST00000410773 ARAP1Q96P48 1450 aa15.52■□□□□ 0.07
RN7SKP39-201ENST00000410773 CHD1O14646 1710 aa15.46■□□□□ 0.06
RN7SKP39-201ENST00000410773 IFT140Q96RY7 1462 aa15.45■□□□□ 0.06
RN7SKP39-201ENST00000410773 EIF4G3O43432 1585 aaKnown RBP15.44■□□□□ 0.06
RN7SKP39-201ENST00000410773 PRDM2Q13029 1718 aa15.42■□□□□ 0.06
RN7SKP39-201ENST00000410773 RSF1Q96T23 1441 aaPredicted RBP15.38■□□□□ 0.05
RN7SKP39-201ENST00000410773 TOPBP1Q92547 1522 aa15.32■□□□□ 0.04
RN7SKP39-201ENST00000410773 TOP2AP11388 1531 aaKnown RBP15.29■□□□□ 0.04
RN7SKP39-201ENST00000410773 AQRO60306 1485 aaKnown RBP eCLIP15.27■□□□□ 0.04
RN7SKP39-201ENST00000410773 TARBP1Q13395 1621 aaKnown RBP15.26■□□□□ 0.03
RN7SKP39-201ENST00000410773 FBLN2P98095 1184 aa15.25■□□□□ 0.03
RN7SKP39-201ENST00000410773 CLASP1Q7Z460 1538 aa15.23■□□□□ 0.03
RN7SKP39-201ENST00000410773 DNMBPQ6XZF7 1577 aa15.22■□□□□ 0.03
RN7SKP39-201ENST00000410773 ABCC8Q09428 1581 aa15.2■□□□□ 0.02
RN7SKP39-201ENST00000410773 SYNJ1O43426 1573 aa15.14■□□□□ 0.01
RN7SKP39-201ENST00000410773 POLA1P09884 1462 aaPredicted RBP15.13■□□□□ 0.01
RN7SKP39-201ENST00000410773 SNAPC4Q5SXM2 1469 aa15.12■□□□□ 0.01
RN7SKP39-201ENST00000410773 CCDC88BA6NC98 1476 aa15.1■□□□□ 0.01
RN7SKP39-201ENST00000410773 GAPVD1Q14C86 1478 aa15.08■□□□□ 0.01
RN7SKP39-201ENST00000410773 RAD54L2Q9Y4B4 1467 aa15.08■□□□□ 0
RN7SKP39-201ENST00000410773 TDRD9Q8NDG6 1382 aaKnown RBP15.06■□□□□ 0
RN7SKP39-201ENST00000410773 ILDR1Q86SU0 546 aaPredicted RBP15.05■□□□□ -0
RN7SKP39-201ENST00000410773 WDR97A6NE52 1622 aa15.04■□□□□ -0
RN7SKP39-201ENST00000410773 MAGI1Q96QZ7 1491 aaPredicted RBP15.04■□□□□ -0
RN7SKP39-201ENST00000410773 CHMP7Q8WUX9 453 aaPredicted RBP15.03■□□□□ -0
RN7SKP39-201ENST00000410773 SYNJ2O15056 1496 aa15□□□□□ -0.01
RN7SKP39-201ENST00000410773 SOGA1O94964 1423 aa15□□□□□ -0.01
RN7SKP39-201ENST00000410773 KIF13AQ9H1H9 1805 aa14.99□□□□□ -0.01
RN7SKP39-201ENST00000410773 GRIN2BQ13224 1484 aa14.96□□□□□ -0.01
RN7SKP39-201ENST00000410773 ERCC6L2Q5T890 1561 aa14.95□□□□□ -0.02
RN7SKP39-201ENST00000410773 FGD5Q6ZNL6 1462 aa14.95□□□□□ -0.02
RN7SKP39-201ENST00000410773 PBRM1Q86U86 1689 aa14.93□□□□□ -0.02
RN7SKP39-201ENST00000410773 CEP170Q5SW79 1584 aa14.85□□□□□ -0.03
RN7SKP39-201ENST00000410773 KDM4FA0A1W2PPD8 638 aa14.85□□□□□ -0.03
RN7SKP39-201ENST00000410773 CUX1P39880 1505 aa14.84□□□□□ -0.03
RN7SKP39-201ENST00000410773 SHROOM2Q13796 1616 aa14.81□□□□□ -0.04
RN7SKP39-201ENST00000410773 ABCA5Q8WWZ7 1642 aa14.81□□□□□ -0.04
RN7SKP39-201ENST00000410773 GRIN2AQ12879 1464 aa14.79□□□□□ -0.04
RN7SKP39-201ENST00000410773 KDM6BO15054 1643 aa14.77□□□□□ -0.05
RN7SKP39-201ENST00000410773 NUP160Q12769 1436 aa14.76□□□□□ -0.05
RN7SKP39-201ENST00000410773 ABCC10Q5T3U5 1492 aa14.76□□□□□ -0.05
RN7SKP39-201ENST00000410773 ADAMTS12P58397 1594 aa14.74□□□□□ -0.05
RN7SKP39-201ENST00000410773 DIP2BQ9P265 1576 aa14.74□□□□□ -0.05
RN7SKP39-201ENST00000410773 ABCA10Q8WWZ4 1543 aa14.72□□□□□ -0.05
RN7SKP39-201ENST00000410773 FAM69CQ0P6D2 419 aa14.72□□□□□ -0.05
RN7SKP39-201ENST00000410773 MAPKBP1O60336 1514 aa14.71□□□□□ -0.06
RN7SKP39-201ENST00000410773 TSPOAP1O95153 1857 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms