RNA–Protein interactions for RNA: ENST00000410746.1

RN7SKP213-201, Transcript of RNA, 7SK small nuclear pseudogene 213, humanhuman

BASIC

Gene RN7SKP213, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP213-201ENST00000410746 NISCHQ9Y2I1 1504 aa13.3□□□□□ -0.28
RN7SKP213-201ENST00000410746 ABCC9O60706 1549 aa12.28□□□□□ -0.44
RN7SKP213-201ENST00000410746 CCDC180Q9P1Z9 1646 aa12.02□□□□□ -0.49
RN7SKP213-201ENST00000410746 DNAJC5BQ9UF47 199 aa11.67□□□□□ -0.54
RN7SKP213-201ENST00000410746 RB1CC1Q8TDY2 1594 aa11.61□□□□□ -0.55
RN7SKP213-201ENST00000410746 NACADO15069 1562 aa11.46□□□□□ -0.57
RN7SKP213-201ENST00000410746 PABPN1Q86U42 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
RN7SKP213-201ENST00000410746 DCAF8L2P0C7V8 631 aa11.35□□□□□ -0.59
RN7SKP213-201ENST00000410746 MYO15BQ96JP2 1530 aa11.25□□□□□ -0.61
RN7SKP213-201ENST00000410746 BICRAQ9NZM4 1560 aa11.2□□□□□ -0.62
RN7SKP213-201ENST00000410746 SHROOM4Q9ULL8 1493 aa11.18□□□□□ -0.62
RN7SKP213-201ENST00000410746 UNC13AQ9UPW8 1703 aa11.15□□□□□ -0.63
RN7SKP213-201ENST00000410746 CECR2Q9BXF3 1484 aa11.12□□□□□ -0.63
RN7SKP213-201ENST00000410746 CC2D2AQ9P2K1 1620 aa11.05□□□□□ -0.64
RN7SKP213-201ENST00000410746 DCAF1Q9Y4B6 1507 aa11□□□□□ -0.65
RN7SKP213-201ENST00000410746 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
RN7SKP213-201ENST00000410746 EIF4G1Q04637 1599 aaKnown RBP10.99□□□□□ -0.65
RN7SKP213-201ENST00000410746 DNAJC5Q9H3Z4 198 aa10.97□□□□□ -0.65
RN7SKP213-201ENST00000410746 SCRIBQ14160 1630 aa10.94□□□□□ -0.66
RN7SKP213-201ENST00000410746 CUX2O14529 1486 aa10.74□□□□□ -0.69
RN7SKP213-201ENST00000410746 ERCC6Q03468 1493 aa10.68□□□□□ -0.7
RN7SKP213-201ENST00000410746 NCAPD3P42695 1498 aa10.6□□□□□ -0.71
RN7SKP213-201ENST00000410746 ATAD2BQ9ULI0 1458 aa10.52□□□□□ -0.73
RN7SKP213-201ENST00000410746 HMGXB3Q12766 1538 aa10.5□□□□□ -0.73
RN7SKP213-201ENST00000410746 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
RN7SKP213-201ENST00000410746 NESP48681 1621 aa10.44□□□□□ -0.74
RN7SKP213-201ENST00000410746 BAZ1BQ9UIG0 1483 aaKnown RBP10.43□□□□□ -0.74
RN7SKP213-201ENST00000410746 SMARCA4P51532 1647 aa10.41□□□□□ -0.74
RN7SKP213-201ENST00000410746 TRIM41Q8WV44 630 aa10.41□□□□□ -0.74
RN7SKP213-201ENST00000410746 THOC2Q8NI27 1593 aaKnown RBP10.39□□□□□ -0.75
RN7SKP213-201ENST00000410746 PDS5BQ9NTI5 1447 aa10.39□□□□□ -0.75
RN7SKP213-201ENST00000410746 LAMC3Q9Y6N6 1575 aa10.38□□□□□ -0.75
RN7SKP213-201ENST00000410746 BAZ1AQ9NRL2 1556 aaPredicted RBP10.37□□□□□ -0.75
RN7SKP213-201ENST00000410746 PEG3Q9GZU2 1588 aa10.32□□□□□ -0.76
RN7SKP213-201ENST00000410746 MRC2Q9UBG0 1479 aa10.3□□□□□ -0.76
RN7SKP213-201ENST00000410746 CADPSQ9ULU8 1353 aa10.27□□□□□ -0.76
RN7SKP213-201ENST00000410746 KIF21AQ7Z4S6 1674 aa10.25□□□□□ -0.77
RN7SKP213-201ENST00000410746 WDR62O43379 1518 aa10.24□□□□□ -0.77
RN7SKP213-201ENST00000410746 MROH2BQ7Z745 1585 aa10.22□□□□□ -0.77
RN7SKP213-201ENST00000410746 CEP164Q9UPV0 1460 aa10.21□□□□□ -0.78
RN7SKP213-201ENST00000410746 OSCARQ8IYS5 282 aa10.2□□□□□ -0.78
RN7SKP213-201ENST00000410746 FANCD2Q9BXW9 1451 aa10.15□□□□□ -0.78
RN7SKP213-201ENST00000410746 CFTRP13569 1480 aa10.1□□□□□ -0.79
RN7SKP213-201ENST00000410746 URB2Q14146 1524 aaKnown RBP10.05□□□□□ -0.8
RN7SKP213-201ENST00000410746 WIZO95785 1651 aa10.03□□□□□ -0.8
RN7SKP213-201ENST00000410746 RIMBP3CA6NJZ7 1639 aa10.02□□□□□ -0.81
RN7SKP213-201ENST00000410746 RIMBP3BA6NNM3 1639 aa10.02□□□□□ -0.81
RN7SKP213-201ENST00000410746 RIMBP3Q9UFD9 1639 aa10.02□□□□□ -0.81
RN7SKP213-201ENST00000410746 IFT140Q96RY7 1462 aa10.02□□□□□ -0.81
RN7SKP213-201ENST00000410746 ARHGEF11O15085 1522 aa10.01□□□□□ -0.81
RN7SKP213-201ENST00000410746 TOP2AP11388 1531 aaKnown RBP9.99□□□□□ -0.81
RN7SKP213-201ENST00000410746 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.82
RN7SKP213-201ENST00000410746 RSF1Q96T23 1441 aaPredicted RBP9.96□□□□□ -0.82
RN7SKP213-201ENST00000410746 CYB5RLQ6IPT4 315 aa9.95□□□□□ -0.82
RN7SKP213-201ENST00000410746 ZNF608Q9ULD9 1512 aaPredicted RBP9.95□□□□□ -0.82
RN7SKP213-201ENST00000410746 ABCC8Q09428 1581 aa9.92□□□□□ -0.82
RN7SKP213-201ENST00000410746 TOPBP1Q92547 1522 aa9.91□□□□□ -0.82
RN7SKP213-201ENST00000410746 ARAP1Q96P48 1450 aa9.9□□□□□ -0.83
RN7SKP213-201ENST00000410746 EIF4G3O43432 1585 aaKnown RBP9.88□□□□□ -0.83
RN7SKP213-201ENST00000410746 AEBP2Q6ZN18 517 aaPredicted RBP9.88□□□□□ -0.83
RN7SKP213-201ENST00000410746 FBLN2P98095 1184 aa9.87□□□□□ -0.83
RN7SKP213-201ENST00000410746 DNMBPQ6XZF7 1577 aa9.85□□□□□ -0.83
RN7SKP213-201ENST00000410746 CCDC88BA6NC98 1476 aa9.85□□□□□ -0.83
RN7SKP213-201ENST00000410746 AQRO60306 1485 aaKnown RBP eCLIP9.85□□□□□ -0.83
RN7SKP213-201ENST00000410746 PRDM2Q13029 1718 aa9.84□□□□□ -0.83
RN7SKP213-201ENST00000410746 POLA1P09884 1462 aaPredicted RBP9.8□□□□□ -0.84
RN7SKP213-201ENST00000410746 TARBP1Q13395 1621 aaKnown RBP9.79□□□□□ -0.84
RN7SKP213-201ENST00000410746 CHD1O14646 1710 aa9.79□□□□□ -0.84
RN7SKP213-201ENST00000410746 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
RN7SKP213-201ENST00000410746 SNAPC4Q5SXM2 1469 aa9.78□□□□□ -0.84
RN7SKP213-201ENST00000410746 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
RN7SKP213-201ENST00000410746 SOGA1O94964 1423 aa9.76□□□□□ -0.85
RN7SKP213-201ENST00000410746 WDR97A6NE52 1622 aa9.76□□□□□ -0.85
RN7SKP213-201ENST00000410746 MAGI1Q96QZ7 1491 aaPredicted RBP9.76□□□□□ -0.85
RN7SKP213-201ENST00000410746 TDRD9Q8NDG6 1382 aaKnown RBP9.75□□□□□ -0.85
RN7SKP213-201ENST00000410746 CLASP1Q7Z460 1538 aa9.75□□□□□ -0.85
RN7SKP213-201ENST00000410746 RAD54L2Q9Y4B4 1467 aa9.74□□□□□ -0.85
RN7SKP213-201ENST00000410746 GRIN2BQ13224 1484 aa9.73□□□□□ -0.85
RN7SKP213-201ENST00000410746 SYNJ2O15056 1496 aa9.72□□□□□ -0.85
RN7SKP213-201ENST00000410746 FGD5Q6ZNL6 1462 aa9.71□□□□□ -0.86
RN7SKP213-201ENST00000410746 GAPVD1Q14C86 1478 aa9.7□□□□□ -0.86
RN7SKP213-201ENST00000410746 CUX1P39880 1505 aa9.63□□□□□ -0.87
RN7SKP213-201ENST00000410746 ABCA10Q8WWZ4 1543 aa9.59□□□□□ -0.87
RN7SKP213-201ENST00000410746 GRIN2AQ12879 1464 aa9.59□□□□□ -0.87
RN7SKP213-201ENST00000410746 NUP160Q12769 1436 aa9.57□□□□□ -0.88
RN7SKP213-201ENST00000410746 PBRM1Q86U86 1689 aa9.55□□□□□ -0.88
RN7SKP213-201ENST00000410746 ABCA5Q8WWZ7 1642 aa9.55□□□□□ -0.88
RN7SKP213-201ENST00000410746 CEP170Q5SW79 1584 aa9.54□□□□□ -0.88
RN7SKP213-201ENST00000410746 FHAD1B1AJZ9 1412 aa9.54□□□□□ -0.88
RN7SKP213-201ENST00000410746 WRNQ14191 1432 aaPredicted RBP eCLIP9.54□□□□□ -0.88
RN7SKP213-201ENST00000410746 ADAMTS12P58397 1594 aa9.53□□□□□ -0.88
RN7SKP213-201ENST00000410746 ERCC6L2Q5T890 1561 aa9.53□□□□□ -0.88
RN7SKP213-201ENST00000410746 NPM1P06748 294 aaKnown RBP eCLIP9.5□□□□□ -0.89
RN7SKP213-201ENST00000410746 PRG4Q92954 1404 aaPredicted RBP9.49□□□□□ -0.89
RN7SKP213-201ENST00000410746 FAM69CQ0P6D2 419 aa9.49□□□□□ -0.89
RN7SKP213-201ENST00000410746 SHROOM2Q13796 1616 aa9.49□□□□□ -0.89
RN7SKP213-201ENST00000410746 ABCC10Q5T3U5 1492 aa9.48□□□□□ -0.89
RN7SKP213-201ENST00000410746 ERICH3Q5RHP9 1530 aa9.47□□□□□ -0.89
RN7SKP213-201ENST00000410746 JPH4Q96JJ6 628 aa9.46□□□□□ -0.9
RN7SKP213-201ENST00000410746 MAPKBP1O60336 1514 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 124.7 ms