RNA–Protein interactions for RNA: ENST00000410675.1

RNU6-628P-201, Transcript of RNA, U6 small nuclear 628, pseudogene, humanhuman

BASIC

Gene RNU6-628P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-628P-201ENST00000410675 NISCHQ9Y2I1 1504 aa10.23□□□□□ -0.77
RNU6-628P-201ENST00000410675 ABCC9O60706 1549 aa9.62□□□□□ -0.87
RNU6-628P-201ENST00000410675 CCDC180Q9P1Z9 1646 aa9.29□□□□□ -0.92
RNU6-628P-201ENST00000410675 DNAJC5BQ9UF47 199 aa9.12□□□□□ -0.95
RNU6-628P-201ENST00000410675 RB1CC1Q8TDY2 1594 aa9.03□□□□□ -0.96
RNU6-628P-201ENST00000410675 DCAF8L2P0C7V8 631 aa9□□□□□ -0.97
RNU6-628P-201ENST00000410675 PABPN1Q86U42 306 aaKnown RBP eCLIP8.94□□□□□ -0.98
RNU6-628P-201ENST00000410675 NACADO15069 1562 aa8.86□□□□□ -0.99
RNU6-628P-201ENST00000410675 UNC13AQ9UPW8 1703 aa8.7□□□□□ -1.02
RNU6-628P-201ENST00000410675 CECR2Q9BXF3 1484 aa8.69□□□□□ -1.02
RNU6-628P-201ENST00000410675 BICRAQ9NZM4 1560 aa8.64□□□□□ -1.03
RNU6-628P-201ENST00000410675 DNAJC5Q9H3Z4 198 aa8.63□□□□□ -1.03
RNU6-628P-201ENST00000410675 CC2D2AQ9P2K1 1620 aa8.62□□□□□ -1.03
RNU6-628P-201ENST00000410675 SHROOM4Q9ULL8 1493 aa8.57□□□□□ -1.04
RNU6-628P-201ENST00000410675 MYO15BQ96JP2 1530 aa8.57□□□□□ -1.04
RNU6-628P-201ENST00000410675 EIF4G1Q04637 1599 aaKnown RBP8.54□□□□□ -1.04
RNU6-628P-201ENST00000410675 SCRIBQ14160 1630 aa8.54□□□□□ -1.04
RNU6-628P-201ENST00000410675 ERCC6Q03468 1493 aa8.42□□□□□ -1.06
RNU6-628P-201ENST00000410675 ZCCHC6Q5VYS8 1495 aaKnown RBP8.4□□□□□ -1.06
RNU6-628P-201ENST00000410675 DCAF1Q9Y4B6 1507 aa8.39□□□□□ -1.07
RNU6-628P-201ENST00000410675 CUX2O14529 1486 aa8.38□□□□□ -1.07
RNU6-628P-201ENST00000410675 TRIM41Q8WV44 630 aa8.33□□□□□ -1.08
RNU6-628P-201ENST00000410675 SMARCA2P51531 1590 aa8.14□□□□□ -1.11
RNU6-628P-201ENST00000410675 NCAPD3P42695 1498 aa8.14□□□□□ -1.11
RNU6-628P-201ENST00000410675 NESP48681 1621 aa8.14□□□□□ -1.11
RNU6-628P-201ENST00000410675 ATAD2BQ9ULI0 1458 aa8.11□□□□□ -1.11
RNU6-628P-201ENST00000410675 BAZ1BQ9UIG0 1483 aaKnown RBP8.1□□□□□ -1.11
RNU6-628P-201ENST00000410675 HMGXB3Q12766 1538 aa8.08□□□□□ -1.12
RNU6-628P-201ENST00000410675 PDS5BQ9NTI5 1447 aa8.08□□□□□ -1.12
RNU6-628P-201ENST00000410675 THOC2Q8NI27 1593 aaKnown RBP8.08□□□□□ -1.12
RNU6-628P-201ENST00000410675 LAMC3Q9Y6N6 1575 aa8.06□□□□□ -1.12
RNU6-628P-201ENST00000410675 SMARCA4P51532 1647 aa8.05□□□□□ -1.12
RNU6-628P-201ENST00000410675 KIF21AQ7Z4S6 1674 aa8.03□□□□□ -1.12
RNU6-628P-201ENST00000410675 OSCARQ8IYS5 282 aa8.01□□□□□ -1.13
RNU6-628P-201ENST00000410675 BAZ1AQ9NRL2 1556 aaPredicted RBP8.01□□□□□ -1.13
RNU6-628P-201ENST00000410675 MRC2Q9UBG0 1479 aa8□□□□□ -1.13
RNU6-628P-201ENST00000410675 AEBP2Q6ZN18 517 aaPredicted RBP7.98□□□□□ -1.13
RNU6-628P-201ENST00000410675 TRHP20396 242 aaPredicted RBP7.96□□□□□ -1.14
RNU6-628P-201ENST00000410675 CEP164Q9UPV0 1460 aa7.94□□□□□ -1.14
RNU6-628P-201ENST00000410675 CADPSQ9ULU8 1353 aa7.94□□□□□ -1.14
RNU6-628P-201ENST00000410675 WDR62O43379 1518 aa7.93□□□□□ -1.14
RNU6-628P-201ENST00000410675 PEG3Q9GZU2 1588 aa7.89□□□□□ -1.15
RNU6-628P-201ENST00000410675 FANCD2Q9BXW9 1451 aa7.87□□□□□ -1.15
RNU6-628P-201ENST00000410675 RIMBP3CA6NJZ7 1639 aa7.87□□□□□ -1.15
RNU6-628P-201ENST00000410675 RIMBP3BA6NNM3 1639 aa7.87□□□□□ -1.15
RNU6-628P-201ENST00000410675 RIMBP3Q9UFD9 1639 aa7.87□□□□□ -1.15
RNU6-628P-201ENST00000410675 MROH2BQ7Z745 1585 aa7.87□□□□□ -1.15
RNU6-628P-201ENST00000410675 CYB5RLQ6IPT4 315 aa7.86□□□□□ -1.15
RNU6-628P-201ENST00000410675 FBLN2P98095 1184 aa7.83□□□□□ -1.16
RNU6-628P-201ENST00000410675 ARHGEF11O15085 1522 aa7.82□□□□□ -1.16
RNU6-628P-201ENST00000410675 WIZO95785 1651 aa7.79□□□□□ -1.16
RNU6-628P-201ENST00000410675 IFT140Q96RY7 1462 aa7.77□□□□□ -1.17
RNU6-628P-201ENST00000410675 URB2Q14146 1524 aaKnown RBP7.77□□□□□ -1.17
RNU6-628P-201ENST00000410675 CFTRP13569 1480 aa7.75□□□□□ -1.17
RNU6-628P-201ENST00000410675 ZNF608Q9ULD9 1512 aaPredicted RBP7.73□□□□□ -1.17
RNU6-628P-201ENST00000410675 EIF4G3O43432 1585 aaKnown RBP7.71□□□□□ -1.18
RNU6-628P-201ENST00000410675 ARAP1Q96P48 1450 aa7.7□□□□□ -1.18
RNU6-628P-201ENST00000410675 CHD1O14646 1710 aa7.69□□□□□ -1.18
RNU6-628P-201ENST00000410675 TOP2AP11388 1531 aaKnown RBP7.68□□□□□ -1.18
RNU6-628P-201ENST00000410675 ABCC8Q09428 1581 aa7.68□□□□□ -1.18
RNU6-628P-201ENST00000410675 CHMP7Q8WUX9 453 aaPredicted RBP7.68□□□□□ -1.18
RNU6-628P-201ENST00000410675 RSF1Q96T23 1441 aaPredicted RBP7.68□□□□□ -1.18
RNU6-628P-201ENST00000410675 AQRO60306 1485 aaKnown RBP eCLIP7.66□□□□□ -1.18
RNU6-628P-201ENST00000410675 TOPBP1Q92547 1522 aa7.66□□□□□ -1.18
RNU6-628P-201ENST00000410675 PRDM2Q13029 1718 aa7.66□□□□□ -1.18
RNU6-628P-201ENST00000410675 DNMBPQ6XZF7 1577 aa7.63□□□□□ -1.19
RNU6-628P-201ENST00000410675 SYNJ1O43426 1573 aa7.63□□□□□ -1.19
RNU6-628P-201ENST00000410675 SNAPC4Q5SXM2 1469 aa7.61□□□□□ -1.19
RNU6-628P-201ENST00000410675 TDRD9Q8NDG6 1382 aaKnown RBP7.59□□□□□ -1.19
RNU6-628P-201ENST00000410675 CCDC88BA6NC98 1476 aa7.59□□□□□ -1.19
RNU6-628P-201ENST00000410675 SOGA1O94964 1423 aa7.58□□□□□ -1.2
RNU6-628P-201ENST00000410675 POLA1P09884 1462 aaPredicted RBP7.57□□□□□ -1.2
RNU6-628P-201ENST00000410675 TARBP1Q13395 1621 aaKnown RBP7.56□□□□□ -1.2
RNU6-628P-201ENST00000410675 GAPVD1Q14C86 1478 aa7.56□□□□□ -1.2
RNU6-628P-201ENST00000410675 RAD54L2Q9Y4B4 1467 aa7.56□□□□□ -1.2
RNU6-628P-201ENST00000410675 MAGI1Q96QZ7 1491 aaPredicted RBP7.55□□□□□ -1.2
RNU6-628P-201ENST00000410675 CLASP1Q7Z460 1538 aa7.54□□□□□ -1.2
RNU6-628P-201ENST00000410675 GRIN2BQ13224 1484 aa7.54□□□□□ -1.2
RNU6-628P-201ENST00000410675 NPM1P06748 294 aaKnown RBP eCLIP7.53□□□□□ -1.2
RNU6-628P-201ENST00000410675 SYNJ2O15056 1496 aa7.53□□□□□ -1.2
RNU6-628P-201ENST00000410675 WDR97A6NE52 1622 aa7.52□□□□□ -1.2
RNU6-628P-201ENST00000410675 FGD5Q6ZNL6 1462 aa7.51□□□□□ -1.21
RNU6-628P-201ENST00000410675 ILDR1Q86SU0 546 aaPredicted RBP7.49□□□□□ -1.21
RNU6-628P-201ENST00000410675 PBRM1Q86U86 1689 aa7.47□□□□□ -1.21
RNU6-628P-201ENST00000410675 FAM69CQ0P6D2 419 aa7.47□□□□□ -1.21
RNU6-628P-201ENST00000410675 GRIN2AQ12879 1464 aa7.42□□□□□ -1.22
RNU6-628P-201ENST00000410675 CUX1P39880 1505 aa7.42□□□□□ -1.22
RNU6-628P-201ENST00000410675 CEP170Q5SW79 1584 aa7.42□□□□□ -1.22
RNU6-628P-201ENST00000410675 KDM6BO15054 1643 aa7.41□□□□□ -1.22
RNU6-628P-201ENST00000410675 TTBK1Q5TCY1 1321 aaPredicted RBP7.41□□□□□ -1.22
RNU6-628P-201ENST00000410675 ERCC6L2Q5T890 1561 aa7.41□□□□□ -1.22
RNU6-628P-201ENST00000410675 PRG4Q92954 1404 aaPredicted RBP7.39□□□□□ -1.23
RNU6-628P-201ENST00000410675 KIF13AQ9H1H9 1805 aa7.38□□□□□ -1.23
RNU6-628P-201ENST00000410675 ADAMTS12P58397 1594 aa7.37□□□□□ -1.23
RNU6-628P-201ENST00000410675 ABCA10Q8WWZ4 1543 aa7.37□□□□□ -1.23
RNU6-628P-201ENST00000410675 FHAD1B1AJZ9 1412 aa7.37□□□□□ -1.23
RNU6-628P-201ENST00000410675 KDM4FA0A1W2PPD8 638 aa7.37□□□□□ -1.23
RNU6-628P-201ENST00000410675 ABCA5Q8WWZ7 1642 aa7.37□□□□□ -1.23
RNU6-628P-201ENST00000410675 ABCC10Q5T3U5 1492 aa7.36□□□□□ -1.23
RNU6-628P-201ENST00000410675 WRNQ14191 1432 aaPredicted RBP eCLIP7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms