RNA–Protein interactions for RNA: ENST00000410635.1

RN7SKP236-201, Transcript of RNA, 7SK small nuclear pseudogene 236, humanhuman

BASIC

Gene RN7SKP236, Length 284 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP236-201ENST00000410635 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
RN7SKP236-201ENST00000410635 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
RN7SKP236-201ENST00000410635 ABCC9O60706 1549 aa17.27■□□□□ 0.36
RN7SKP236-201ENST00000410635 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
RN7SKP236-201ENST00000410635 NACADO15069 1562 aa16.33■□□□□ 0.2
RN7SKP236-201ENST00000410635 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
RN7SKP236-201ENST00000410635 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
RN7SKP236-201ENST00000410635 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
RN7SKP236-201ENST00000410635 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
RN7SKP236-201ENST00000410635 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
RN7SKP236-201ENST00000410635 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
RN7SKP236-201ENST00000410635 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
RN7SKP236-201ENST00000410635 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
RN7SKP236-201ENST00000410635 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
RN7SKP236-201ENST00000410635 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
RN7SKP236-201ENST00000410635 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
RN7SKP236-201ENST00000410635 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
RN7SKP236-201ENST00000410635 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
RN7SKP236-201ENST00000410635 NCAPD3P42695 1498 aa15.08■□□□□ 0
RN7SKP236-201ENST00000410635 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
RN7SKP236-201ENST00000410635 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
RN7SKP236-201ENST00000410635 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
RN7SKP236-201ENST00000410635 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
RN7SKP236-201ENST00000410635 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
RN7SKP236-201ENST00000410635 CUX2O14529 1486 aa14.95□□□□□ -0.02
RN7SKP236-201ENST00000410635 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
RN7SKP236-201ENST00000410635 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
RN7SKP236-201ENST00000410635 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
RN7SKP236-201ENST00000410635 NESP48681 1621 aa14.86□□□□□ -0.03
RN7SKP236-201ENST00000410635 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
RN7SKP236-201ENST00000410635 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
RN7SKP236-201ENST00000410635 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
RN7SKP236-201ENST00000410635 LAMC3Q9Y6N6 1575 aa14.75□□□□□ -0.05
RN7SKP236-201ENST00000410635 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
RN7SKP236-201ENST00000410635 WIZO95785 1651 aa14.62□□□□□ -0.07
RN7SKP236-201ENST00000410635 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
RN7SKP236-201ENST00000410635 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
RN7SKP236-201ENST00000410635 WDR62O43379 1518 aa14.53□□□□□ -0.08
RN7SKP236-201ENST00000410635 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
RN7SKP236-201ENST00000410635 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
RN7SKP236-201ENST00000410635 CFTRP13569 1480 aa14.43□□□□□ -0.1
RN7SKP236-201ENST00000410635 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
RN7SKP236-201ENST00000410635 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
RN7SKP236-201ENST00000410635 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
RN7SKP236-201ENST00000410635 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
RN7SKP236-201ENST00000410635 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
RN7SKP236-201ENST00000410635 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
RN7SKP236-201ENST00000410635 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
RN7SKP236-201ENST00000410635 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
RN7SKP236-201ENST00000410635 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
RN7SKP236-201ENST00000410635 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
RN7SKP236-201ENST00000410635 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
RN7SKP236-201ENST00000410635 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
RN7SKP236-201ENST00000410635 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
RN7SKP236-201ENST00000410635 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
RN7SKP236-201ENST00000410635 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
RN7SKP236-201ENST00000410635 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
RN7SKP236-201ENST00000410635 TARBP1Q13395 1621 aaKnown RBP14.1□□□□□ -0.15
RN7SKP236-201ENST00000410635 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
RN7SKP236-201ENST00000410635 CHD1O14646 1710 aa14.05□□□□□ -0.16
RN7SKP236-201ENST00000410635 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
RN7SKP236-201ENST00000410635 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
RN7SKP236-201ENST00000410635 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
RN7SKP236-201ENST00000410635 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
RN7SKP236-201ENST00000410635 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
RN7SKP236-201ENST00000410635 CUX1P39880 1505 aa13.9□□□□□ -0.18
RN7SKP236-201ENST00000410635 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
RN7SKP236-201ENST00000410635 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
RN7SKP236-201ENST00000410635 SOGA1O94964 1423 aa13.88□□□□□ -0.19
RN7SKP236-201ENST00000410635 CLASP1Q7Z460 1538 aa13.87□□□□□ -0.19
RN7SKP236-201ENST00000410635 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
RN7SKP236-201ENST00000410635 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
RN7SKP236-201ENST00000410635 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
RN7SKP236-201ENST00000410635 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
RN7SKP236-201ENST00000410635 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
RN7SKP236-201ENST00000410635 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
RN7SKP236-201ENST00000410635 FBLN2P98095 1184 aa13.79□□□□□ -0.2
RN7SKP236-201ENST00000410635 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
RN7SKP236-201ENST00000410635 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
RN7SKP236-201ENST00000410635 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
RN7SKP236-201ENST00000410635 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
RN7SKP236-201ENST00000410635 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
RN7SKP236-201ENST00000410635 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
RN7SKP236-201ENST00000410635 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
RN7SKP236-201ENST00000410635 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
RN7SKP236-201ENST00000410635 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
RN7SKP236-201ENST00000410635 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
RN7SKP236-201ENST00000410635 CEP170Q5SW79 1584 aa13.64□□□□□ -0.23
RN7SKP236-201ENST00000410635 GRIN2AQ12879 1464 aa13.64□□□□□ -0.23
RN7SKP236-201ENST00000410635 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP236-201ENST00000410635 SHROOM2Q13796 1616 aa13.63□□□□□ -0.23
RN7SKP236-201ENST00000410635 NUP160Q12769 1436 aa13.62□□□□□ -0.23
RN7SKP236-201ENST00000410635 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
RN7SKP236-201ENST00000410635 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
RN7SKP236-201ENST00000410635 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
RN7SKP236-201ENST00000410635 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
RN7SKP236-201ENST00000410635 KIF13AQ9H1H9 1805 aa13.51□□□□□ -0.25
RN7SKP236-201ENST00000410635 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
RN7SKP236-201ENST00000410635 PRG4Q92954 1404 aaPredicted RBP13.43□□□□□ -0.26
RN7SKP236-201ENST00000410635 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms