RNA–Protein interactions for RNA: ENST00000410635.1

RN7SKP236-201, Transcript of RNA, 7SK small nuclear pseudogene 236, humanhuman

BASIC

Gene RN7SKP236, Length 284 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP236-201ENST00000410635 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
RN7SKP236-201ENST00000410635 CCDC180Q9P1Z9 1646 aa17.32■□□□□ 0.36
RN7SKP236-201ENST00000410635 ABCC9O60706 1549 aa17.27■□□□□ 0.36
RN7SKP236-201ENST00000410635 RB1CC1Q8TDY2 1594 aa16.44■□□□□ 0.22
RN7SKP236-201ENST00000410635 NACADO15069 1562 aa16.33■□□□□ 0.2
RN7SKP236-201ENST00000410635 DNAJC5BQ9UF47 199 aa16.32■□□□□ 0.2
RN7SKP236-201ENST00000410635 UNC13AQ9UPW8 1703 aa16.22■□□□□ 0.19
RN7SKP236-201ENST00000410635 MYO15BQ96JP2 1530 aa16.12■□□□□ 0.17
RN7SKP236-201ENST00000410635 BICRAQ9NZM4 1560 aa16.07■□□□□ 0.16
RN7SKP236-201ENST00000410635 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
RN7SKP236-201ENST00000410635 PABPN1Q86U42 306 aaKnown RBP eCLIP16.02■□□□□ 0.16
RN7SKP236-201ENST00000410635 ZCCHC6Q5VYS8 1495 aaKnown RBP15.91■□□□□ 0.14
RN7SKP236-201ENST00000410635 DCAF1Q9Y4B6 1507 aa15.89■□□□□ 0.13
RN7SKP236-201ENST00000410635 SHROOM4Q9ULL8 1493 aa15.78■□□□□ 0.12
RN7SKP236-201ENST00000410635 SCRIBQ14160 1630 aa15.7■□□□□ 0.1
RN7SKP236-201ENST00000410635 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
RN7SKP236-201ENST00000410635 EIF4G1Q04637 1599 aaKnown RBP15.62■□□□□ 0.09
RN7SKP236-201ENST00000410635 CECR2Q9BXF3 1484 aa15.58■□□□□ 0.08
RN7SKP236-201ENST00000410635 NCAPD3P42695 1498 aa15.08■□□□□ 0
RN7SKP236-201ENST00000410635 SMARCA4P51532 1647 aa15.01□□□□□ -0.01
RN7SKP236-201ENST00000410635 ATAD2BQ9ULI0 1458 aa15.01□□□□□ -0.01
RN7SKP236-201ENST00000410635 DNAJC5Q9H3Z4 198 aa15□□□□□ -0.01
RN7SKP236-201ENST00000410635 HMGXB3Q12766 1538 aa14.97□□□□□ -0.01
RN7SKP236-201ENST00000410635 SMARCA2P51531 1590 aa14.95□□□□□ -0.02
RN7SKP236-201ENST00000410635 CUX2O14529 1486 aa14.95□□□□□ -0.02
RN7SKP236-201ENST00000410635 PEG3Q9GZU2 1588 aa14.9□□□□□ -0.02
RN7SKP236-201ENST00000410635 BAZ1AQ9NRL2 1556 aaPredicted RBP14.88□□□□□ -0.03
RN7SKP236-201ENST00000410635 ERCC6Q03468 1493 aa14.87□□□□□ -0.03
RN7SKP236-201ENST00000410635 NESP48681 1621 aa14.86□□□□□ -0.03
RN7SKP236-201ENST00000410635 BAZ1BQ9UIG0 1483 aaKnown RBP14.82□□□□□ -0.04
RN7SKP236-201ENST00000410635 MROH2BQ7Z745 1585 aa14.79□□□□□ -0.04
RN7SKP236-201ENST00000410635 THOC2Q8NI27 1593 aaKnown RBP14.78□□□□□ -0.04
RN7SKP236-201ENST00000410635 LAMC3Q9Y6N6 1575 aa14.75□□□□□ -0.05
RN7SKP236-201ENST00000410635 KIF21AQ7Z4S6 1674 aa14.73□□□□□ -0.05
RN7SKP236-201ENST00000410635 WIZO95785 1651 aa14.62□□□□□ -0.07
RN7SKP236-201ENST00000410635 PDS5BQ9NTI5 1447 aa14.59□□□□□ -0.07
RN7SKP236-201ENST00000410635 CADPSQ9ULU8 1353 aa14.56□□□□□ -0.08
RN7SKP236-201ENST00000410635 WDR62O43379 1518 aa14.53□□□□□ -0.08
RN7SKP236-201ENST00000410635 MRC2Q9UBG0 1479 aa14.51□□□□□ -0.09
RN7SKP236-201ENST00000410635 RSF1Q96T23 1441 aaPredicted RBP14.43□□□□□ -0.1
RN7SKP236-201ENST00000410635 CFTRP13569 1480 aa14.43□□□□□ -0.1
RN7SKP236-201ENST00000410635 CEP164Q9UPV0 1460 aa14.43□□□□□ -0.1
RN7SKP236-201ENST00000410635 TOP2AP11388 1531 aaKnown RBP14.41□□□□□ -0.1
RN7SKP236-201ENST00000410635 FANCD2Q9BXW9 1451 aa14.41□□□□□ -0.1
RN7SKP236-201ENST00000410635 PRDM2Q13029 1718 aa14.38□□□□□ -0.11
RN7SKP236-201ENST00000410635 URB2Q14146 1524 aaKnown RBP14.35□□□□□ -0.11
RN7SKP236-201ENST00000410635 CCDC88BA6NC98 1476 aa14.23□□□□□ -0.13
RN7SKP236-201ENST00000410635 TRIM41Q8WV44 630 aa14.21□□□□□ -0.13
RN7SKP236-201ENST00000410635 ZNF608Q9ULD9 1512 aaPredicted RBP14.16□□□□□ -0.14
RN7SKP236-201ENST00000410635 OSCARQ8IYS5 282 aa14.16□□□□□ -0.14
RN7SKP236-201ENST00000410635 TOPBP1Q92547 1522 aa14.15□□□□□ -0.14
RN7SKP236-201ENST00000410635 IFT140Q96RY7 1462 aa14.14□□□□□ -0.15
RN7SKP236-201ENST00000410635 RIMBP3CA6NJZ7 1639 aa14.12□□□□□ -0.15
RN7SKP236-201ENST00000410635 RIMBP3BA6NNM3 1639 aa14.12□□□□□ -0.15
RN7SKP236-201ENST00000410635 RIMBP3Q9UFD9 1639 aa14.12□□□□□ -0.15
RN7SKP236-201ENST00000410635 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
RN7SKP236-201ENST00000410635 DNMBPQ6XZF7 1577 aa14.1□□□□□ -0.15
RN7SKP236-201ENST00000410635 TARBP1Q13395 1621 aaKnown RBP14.1□□□□□ -0.15
RN7SKP236-201ENST00000410635 ABCC8Q09428 1581 aa14.09□□□□□ -0.15
RN7SKP236-201ENST00000410635 CHD1O14646 1710 aa14.05□□□□□ -0.16
RN7SKP236-201ENST00000410635 ARHGEF11O15085 1522 aa14.03□□□□□ -0.16
RN7SKP236-201ENST00000410635 POLA1P09884 1462 aaPredicted RBP14□□□□□ -0.17
RN7SKP236-201ENST00000410635 AQRO60306 1485 aaKnown RBP eCLIP13.99□□□□□ -0.17
RN7SKP236-201ENST00000410635 RAD54L2Q9Y4B4 1467 aa13.93□□□□□ -0.18
RN7SKP236-201ENST00000410635 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
RN7SKP236-201ENST00000410635 CUX1P39880 1505 aa13.9□□□□□ -0.18
RN7SKP236-201ENST00000410635 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
RN7SKP236-201ENST00000410635 FGD5Q6ZNL6 1462 aa13.89□□□□□ -0.19
RN7SKP236-201ENST00000410635 SOGA1O94964 1423 aa13.88□□□□□ -0.19
RN7SKP236-201ENST00000410635 CLASP1Q7Z460 1538 aa13.87□□□□□ -0.19
RN7SKP236-201ENST00000410635 TDRD9Q8NDG6 1382 aaKnown RBP13.86□□□□□ -0.19
RN7SKP236-201ENST00000410635 SNAPC4Q5SXM2 1469 aa13.85□□□□□ -0.19
RN7SKP236-201ENST00000410635 CYB5RLQ6IPT4 315 aa13.83□□□□□ -0.2
RN7SKP236-201ENST00000410635 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
RN7SKP236-201ENST00000410635 MAGI1Q96QZ7 1491 aaPredicted RBP13.82□□□□□ -0.2
RN7SKP236-201ENST00000410635 GRIN2BQ13224 1484 aa13.8□□□□□ -0.2
RN7SKP236-201ENST00000410635 FBLN2P98095 1184 aa13.79□□□□□ -0.2
RN7SKP236-201ENST00000410635 SYNJ1O43426 1573 aa13.79□□□□□ -0.2
RN7SKP236-201ENST00000410635 ABCA5Q8WWZ7 1642 aa13.79□□□□□ -0.2
RN7SKP236-201ENST00000410635 SYNJ2O15056 1496 aa13.77□□□□□ -0.21
RN7SKP236-201ENST00000410635 ABCA10Q8WWZ4 1543 aa13.74□□□□□ -0.21
RN7SKP236-201ENST00000410635 GAPVD1Q14C86 1478 aa13.74□□□□□ -0.21
RN7SKP236-201ENST00000410635 CHMP7Q8WUX9 453 aaPredicted RBP13.71□□□□□ -0.21
RN7SKP236-201ENST00000410635 BIVM-ERCC5R4GMW8 1640 aa13.7□□□□□ -0.22
RN7SKP236-201ENST00000410635 TOP2BQ02880 1626 aa13.67□□□□□ -0.22
RN7SKP236-201ENST00000410635 ADAMTS12P58397 1594 aa13.66□□□□□ -0.22
RN7SKP236-201ENST00000410635 ERCC6L2Q5T890 1561 aa13.65□□□□□ -0.22
RN7SKP236-201ENST00000410635 CEP170Q5SW79 1584 aa13.64□□□□□ -0.23
RN7SKP236-201ENST00000410635 GRIN2AQ12879 1464 aa13.64□□□□□ -0.23
RN7SKP236-201ENST00000410635 TRHP20396 242 aaPredicted RBP13.64□□□□□ -0.23
RN7SKP236-201ENST00000410635 SHROOM2Q13796 1616 aa13.63□□□□□ -0.23
RN7SKP236-201ENST00000410635 NUP160Q12769 1436 aa13.62□□□□□ -0.23
RN7SKP236-201ENST00000410635 WRNQ14191 1432 aaPredicted RBP eCLIP13.61□□□□□ -0.23
RN7SKP236-201ENST00000410635 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
RN7SKP236-201ENST00000410635 ERICH3Q5RHP9 1530 aa13.57□□□□□ -0.24
RN7SKP236-201ENST00000410635 FHAD1B1AJZ9 1412 aa13.56□□□□□ -0.24
RN7SKP236-201ENST00000410635 KIF13AQ9H1H9 1805 aa13.51□□□□□ -0.25
RN7SKP236-201ENST00000410635 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
RN7SKP236-201ENST00000410635 PRG4Q92954 1404 aaPredicted RBP13.43□□□□□ -0.26
RN7SKP236-201ENST00000410635 JPH4Q96JJ6 628 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms