RNA–Protein interactions for RNA: ENST00000410439.1

RN7SKP202-201, Transcript of RNA, 7SK small nuclear pseudogene 202, humanhuman

BASIC

Gene RN7SKP202, Length 330 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP202-201ENST00000410439 NISCHQ9Y2I1 1504 aa10.15□□□□□ -0.78
RN7SKP202-201ENST00000410439 ABCC9O60706 1549 aa9.79□□□□□ -0.84
RN7SKP202-201ENST00000410439 AEBP2Q6ZN18 517 aaPredicted RBP9.61□□□□□ -0.87
RN7SKP202-201ENST00000410439 DNAJC5BQ9UF47 199 aa9.6□□□□□ -0.87
RN7SKP202-201ENST00000410439 CHIC1Q5VXU3 224 aa9.53□□□□□ -0.88
RN7SKP202-201ENST00000410439 CCDC180Q9P1Z9 1646 aa9.23□□□□□ -0.93
RN7SKP202-201ENST00000410439 DNAJC5Q9H3Z4 198 aa9.18□□□□□ -0.94
RN7SKP202-201ENST00000410439 PABPN1Q86U42 306 aaKnown RBP eCLIP9.11□□□□□ -0.95
RN7SKP202-201ENST00000410439 RB1CC1Q8TDY2 1594 aa9.08□□□□□ -0.96
RN7SKP202-201ENST00000410439 DCAF8L2P0C7V8 631 aa8.99□□□□□ -0.97
RN7SKP202-201ENST00000410439 NACADO15069 1562 aa8.9□□□□□ -0.98
RN7SKP202-201ENST00000410439 CECR2Q9BXF3 1484 aa8.86□□□□□ -0.99
RN7SKP202-201ENST00000410439 BICRAQ9NZM4 1560 aa8.77□□□□□ -1.01
RN7SKP202-201ENST00000410439 UNC13AQ9UPW8 1703 aa8.77□□□□□ -1.01
RN7SKP202-201ENST00000410439 CC2D2AQ9P2K1 1620 aa8.76□□□□□ -1.01
RN7SKP202-201ENST00000410439 TRIM41Q8WV44 630 aa8.66□□□□□ -1.02
RN7SKP202-201ENST00000410439 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
RN7SKP202-201ENST00000410439 SHROOM4Q9ULL8 1493 aa8.62□□□□□ -1.03
RN7SKP202-201ENST00000410439 CUX2O14529 1486 aa8.6□□□□□ -1.03
RN7SKP202-201ENST00000410439 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
RN7SKP202-201ENST00000410439 ERCC6Q03468 1493 aa8.51□□□□□ -1.05
RN7SKP202-201ENST00000410439 SCRIBQ14160 1630 aa8.47□□□□□ -1.05
RN7SKP202-201ENST00000410439 PHF23Q9BUL5 403 aaPredicted RBP8.4□□□□□ -1.06
RN7SKP202-201ENST00000410439 DCAF1Q9Y4B6 1507 aa8.32□□□□□ -1.08
RN7SKP202-201ENST00000410439 ZCCHC6Q5VYS8 1495 aaKnown RBP8.27□□□□□ -1.09
RN7SKP202-201ENST00000410439 OSCARQ8IYS5 282 aa8.25□□□□□ -1.09
RN7SKP202-201ENST00000410439 NCAPD3P42695 1498 aa8.25□□□□□ -1.09
RN7SKP202-201ENST00000410439 NESP48681 1621 aa8.25□□□□□ -1.09
RN7SKP202-201ENST00000410439 TRHP20396 242 aaPredicted RBP8.19□□□□□ -1.1
RN7SKP202-201ENST00000410439 THOC2Q8NI27 1593 aaKnown RBP8.18□□□□□ -1.1
RN7SKP202-201ENST00000410439 SMARCA2P51531 1590 aa8.16□□□□□ -1.1
RN7SKP202-201ENST00000410439 PDS5BQ9NTI5 1447 aa8.15□□□□□ -1.1
RN7SKP202-201ENST00000410439 ATAD2BQ9ULI0 1458 aa8.14□□□□□ -1.11
RN7SKP202-201ENST00000410439 SENP3Q9H4L4 574 aaPredicted RBP8.14□□□□□ -1.11
RN7SKP202-201ENST00000410439 BAZ1AQ9NRL2 1556 aaPredicted RBP8.1□□□□□ -1.11
RN7SKP202-201ENST00000410439 LAMC3Q9Y6N6 1575 aa8.1□□□□□ -1.11
RN7SKP202-201ENST00000410439 CYB5RLQ6IPT4 315 aa8.1□□□□□ -1.11
RN7SKP202-201ENST00000410439 HMGXB3Q12766 1538 aa8.08□□□□□ -1.12
RN7SKP202-201ENST00000410439 KIF21AQ7Z4S6 1674 aa8.07□□□□□ -1.12
RN7SKP202-201ENST00000410439 BAZ1BQ9UIG0 1483 aaKnown RBP8.06□□□□□ -1.12
RN7SKP202-201ENST00000410439 MRC2Q9UBG0 1479 aa8.05□□□□□ -1.12
RN7SKP202-201ENST00000410439 RIMBP3CA6NJZ7 1639 aa8.04□□□□□ -1.12
RN7SKP202-201ENST00000410439 RIMBP3BA6NNM3 1639 aa8.04□□□□□ -1.12
RN7SKP202-201ENST00000410439 RIMBP3Q9UFD9 1639 aa8.04□□□□□ -1.12
RN7SKP202-201ENST00000410439 CADPSQ9ULU8 1353 aa8.01□□□□□ -1.13
RN7SKP202-201ENST00000410439 WDR62O43379 1518 aa8□□□□□ -1.13
RN7SKP202-201ENST00000410439 ARHGEF11O15085 1522 aa7.98□□□□□ -1.13
RN7SKP202-201ENST00000410439 SMARCA4P51532 1647 aa7.98□□□□□ -1.13
RN7SKP202-201ENST00000410439 ILDR1Q86SU0 546 aaPredicted RBP7.96□□□□□ -1.14
RN7SKP202-201ENST00000410439 CEP164Q9UPV0 1460 aa7.94□□□□□ -1.14
RN7SKP202-201ENST00000410439 FANCD2Q9BXW9 1451 aa7.89□□□□□ -1.15
RN7SKP202-201ENST00000410439 FBLN2P98095 1184 aa7.89□□□□□ -1.15
RN7SKP202-201ENST00000410439 PEG3Q9GZU2 1588 aa7.88□□□□□ -1.15
RN7SKP202-201ENST00000410439 ARAP1Q96P48 1450 aa7.87□□□□□ -1.15
RN7SKP202-201ENST00000410439 PLPPR3Q6T4P5 718 aa7.83□□□□□ -1.16
RN7SKP202-201ENST00000410439 URB2Q14146 1524 aaKnown RBP7.82□□□□□ -1.16
RN7SKP202-201ENST00000410439 RSF1Q96T23 1441 aaPredicted RBP7.81□□□□□ -1.16
RN7SKP202-201ENST00000410439 ZNF608Q9ULD9 1512 aaPredicted RBP7.81□□□□□ -1.16
RN7SKP202-201ENST00000410439 IFT140Q96RY7 1462 aa7.81□□□□□ -1.16
RN7SKP202-201ENST00000410439 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
RN7SKP202-201ENST00000410439 CFTRP13569 1480 aa7.77□□□□□ -1.17
RN7SKP202-201ENST00000410439 CHMP7Q8WUX9 453 aaPredicted RBP7.73□□□□□ -1.17
RN7SKP202-201ENST00000410439 AQRO60306 1485 aaKnown RBP eCLIP7.73□□□□□ -1.17
RN7SKP202-201ENST00000410439 CHD1O14646 1710 aa7.72□□□□□ -1.17
RN7SKP202-201ENST00000410439 EIF4G3O43432 1585 aaKnown RBP7.7□□□□□ -1.18
RN7SKP202-201ENST00000410439 KDM4FA0A1W2PPD8 638 aa7.69□□□□□ -1.18
RN7SKP202-201ENST00000410439 WIZO95785 1651 aa7.69□□□□□ -1.18
RN7SKP202-201ENST00000410439 TOPBP1Q92547 1522 aa7.68□□□□□ -1.18
RN7SKP202-201ENST00000410439 ABCC8Q09428 1581 aa7.67□□□□□ -1.18
RN7SKP202-201ENST00000410439 GAPVD1Q14C86 1478 aa7.66□□□□□ -1.18
RN7SKP202-201ENST00000410439 SYNJ1O43426 1573 aa7.64□□□□□ -1.19
RN7SKP202-201ENST00000410439 TDRD9Q8NDG6 1382 aaKnown RBP7.63□□□□□ -1.19
RN7SKP202-201ENST00000410439 CLASP1Q7Z460 1538 aa7.62□□□□□ -1.19
RN7SKP202-201ENST00000410439 FAM69CQ0P6D2 419 aa7.62□□□□□ -1.19
RN7SKP202-201ENST00000410439 FBXO41Q8TF61 875 aa7.62□□□□□ -1.19
RN7SKP202-201ENST00000410439 NPM1P06748 294 aaKnown RBP eCLIP7.6□□□□□ -1.19
RN7SKP202-201ENST00000410439 SNAPC4Q5SXM2 1469 aa7.6□□□□□ -1.19
RN7SKP202-201ENST00000410439 SOGA1O94964 1423 aa7.6□□□□□ -1.19
RN7SKP202-201ENST00000410439 TARBP1Q13395 1621 aaKnown RBP7.59□□□□□ -1.19
RN7SKP202-201ENST00000410439 DNMBPQ6XZF7 1577 aa7.59□□□□□ -1.2
RN7SKP202-201ENST00000410439 RAD54L2Q9Y4B4 1467 aa7.57□□□□□ -1.2
RN7SKP202-201ENST00000410439 POLA1P09884 1462 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP202-201ENST00000410439 MAGI1Q96QZ7 1491 aaPredicted RBP7.56□□□□□ -1.2
RN7SKP202-201ENST00000410439 PRDM2Q13029 1718 aa7.56□□□□□ -1.2
RN7SKP202-201ENST00000410439 SYNJ2O15056 1496 aa7.55□□□□□ -1.2
RN7SKP202-201ENST00000410439 TOP2AP11388 1531 aaKnown RBP7.55□□□□□ -1.2
RN7SKP202-201ENST00000410439 GRIN2BQ13224 1484 aa7.54□□□□□ -1.2
RN7SKP202-201ENST00000410439 ERCC6L2Q5T890 1561 aa7.54□□□□□ -1.2
RN7SKP202-201ENST00000410439 FOXD1Q16676 465 aa7.53□□□□□ -1.2
RN7SKP202-201ENST00000410439 LMTK3Q96Q04 1460 aa7.53□□□□□ -1.2
RN7SKP202-201ENST00000410439 CCDC88BA6NC98 1476 aa7.52□□□□□ -1.21
RN7SKP202-201ENST00000410439 KDM6BO15054 1643 aa7.52□□□□□ -1.21
RN7SKP202-201ENST00000410439 KIF13AQ9H1H9 1805 aa7.51□□□□□ -1.21
RN7SKP202-201ENST00000410439 SOCS7O14512 581 aa7.5□□□□□ -1.21
RN7SKP202-201ENST00000410439 HECW2Q9P2P5 1572 aa7.5□□□□□ -1.21
RN7SKP202-201ENST00000410439 ABCC10Q5T3U5 1492 aa7.49□□□□□ -1.21
RN7SKP202-201ENST00000410439 WDR97A6NE52 1622 aa7.49□□□□□ -1.21
RN7SKP202-201ENST00000410439 ADGRL1O94910 1474 aa7.48□□□□□ -1.21
RN7SKP202-201ENST00000410439 FGD5Q6ZNL6 1462 aa7.46□□□□□ -1.22
RN7SKP202-201ENST00000410439 CEP170Q5SW79 1584 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms