RNA–Protein interactions for RNA: ENST00000410094.5

SDK2-202, Transcript of sidekick cell adhesion molecule 2, humanhuman

TSL 5

Gene SDK2, Length 1,736 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDK2-202ENST00000410094 NISCHQ9Y2I1 1504 aa29.78■■■□□ 2.36
SDK2-202ENST00000410094 CCDC180Q9P1Z9 1646 aa25.91■■□□□ 1.74
SDK2-202ENST00000410094 AEBP2Q6ZN18 517 aaPredicted RBP25.74■■□□□ 1.71
SDK2-202ENST00000410094 ZCCHC6Q5VYS8 1495 aaKnown RBP25.04■■□□□ 1.6
SDK2-202ENST00000410094 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
SDK2-202ENST00000410094 DCAF1Q9Y4B6 1507 aa24.65■■□□□ 1.54
SDK2-202ENST00000410094 DCAF8L2P0C7V8 631 aa24.56■■□□□ 1.52
SDK2-202ENST00000410094 ABCC9O60706 1549 aa24.4■■□□□ 1.5
SDK2-202ENST00000410094 SHROOM4Q9ULL8 1493 aa24.37■■□□□ 1.49
SDK2-202ENST00000410094 MYO15BQ96JP2 1530 aa24.31■■□□□ 1.48
SDK2-202ENST00000410094 NACADO15069 1562 aa24.12■■□□□ 1.45
SDK2-202ENST00000410094 RB1CC1Q8TDY2 1594 aa23.87■■□□□ 1.41
SDK2-202ENST00000410094 SCRIBQ14160 1630 aa23.82■■□□□ 1.4
SDK2-202ENST00000410094 SUPT5HO00267 1087 aaKnown RBP23.54■■□□□ 1.36
SDK2-202ENST00000410094 UNC13AQ9UPW8 1703 aa23.35■■□□□ 1.33
SDK2-202ENST00000410094 RSF1Q96T23 1441 aaPredicted RBP23.15■■□□□ 1.3
SDK2-202ENST00000410094 BICRAQ9NZM4 1560 aa23.11■■□□□ 1.29
SDK2-202ENST00000410094 CECR2Q9BXF3 1484 aa23.1■■□□□ 1.29
SDK2-202ENST00000410094 PABPN1Q86U42 306 aaKnown RBP eCLIP23■■□□□ 1.27
SDK2-202ENST00000410094 BAZ1AQ9NRL2 1556 aaPredicted RBP22.99■■□□□ 1.27
SDK2-202ENST00000410094 MROH2BQ7Z745 1585 aa22.99■■□□□ 1.27
SDK2-202ENST00000410094 SMARCA4P51532 1647 aa22.86■■□□□ 1.25
SDK2-202ENST00000410094 DNAJC5BQ9UF47 199 aa22.82■■□□□ 1.24
SDK2-202ENST00000410094 WIZO95785 1651 aa22.81■■□□□ 1.24
SDK2-202ENST00000410094 TOP2AP11388 1531 aaKnown RBP22.6■■□□□ 1.21
SDK2-202ENST00000410094 PEG3Q9GZU2 1588 aa22.58■■□□□ 1.21
SDK2-202ENST00000410094 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
SDK2-202ENST00000410094 ATAD2BQ9ULI0 1458 aa22.45■■□□□ 1.18
SDK2-202ENST00000410094 EIF4G1Q04637 1599 aaKnown RBP22.42■■□□□ 1.18
SDK2-202ENST00000410094 CCDC88BA6NC98 1476 aa22.37■■□□□ 1.17
SDK2-202ENST00000410094 BAZ1BQ9UIG0 1483 aaKnown RBP22.35■■□□□ 1.17
SDK2-202ENST00000410094 NCAPD3P42695 1498 aa22.25■■□□□ 1.15
SDK2-202ENST00000410094 HMGXB3Q12766 1538 aa22.23■■□□□ 1.15
SDK2-202ENST00000410094 TRIM41Q8WV44 630 aa22.15■■□□□ 1.14
SDK2-202ENST00000410094 CC2D2AQ9P2K1 1620 aa22.08■■□□□ 1.12
SDK2-202ENST00000410094 ABCC8Q09428 1581 aa21.91■■□□□ 1.1
SDK2-202ENST00000410094 SENP3Q9H4L4 574 aaPredicted RBP21.89■■□□□ 1.1
SDK2-202ENST00000410094 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
SDK2-202ENST00000410094 WRNQ14191 1432 aaPredicted RBP eCLIP21.8■■□□□ 1.08
SDK2-202ENST00000410094 CFTRP13569 1480 aa21.79■■□□□ 1.08
SDK2-202ENST00000410094 LOC105371045A0A1W2PR82 267 aa21.73■■□□□ 1.07
SDK2-202ENST00000410094 FAM9AQ8IZU1 332 aaPredicted RBP21.72■■□□□ 1.07
SDK2-202ENST00000410094 CADPSQ9ULU8 1353 aa21.7■■□□□ 1.06
SDK2-202ENST00000410094 PRDM2Q13029 1718 aa21.68■■□□□ 1.06
SDK2-202ENST00000410094 SYNJ1O43426 1573 aa21.67■■□□□ 1.06
SDK2-202ENST00000410094 TOP2BQ02880 1626 aa21.6■■□□□ 1.05
SDK2-202ENST00000410094 EEA1Q15075 1411 aa21.6■■□□□ 1.05
SDK2-202ENST00000410094 BIVM-ERCC5R4GMW8 1640 aa21.57■■□□□ 1.04
SDK2-202ENST00000410094 SOGA1O94964 1423 aa21.55■■□□□ 1.04
SDK2-202ENST00000410094 CUX1P39880 1505 aa21.5■■□□□ 1.03
SDK2-202ENST00000410094 LAMC3Q9Y6N6 1575 aa21.47■■□□□ 1.03
SDK2-202ENST00000410094 CSRNP3Q8WYN3 585 aa21.45■■□□□ 1.02
SDK2-202ENST00000410094 FANCD2Q9BXW9 1451 aa21.45■■□□□ 1.02
SDK2-202ENST00000410094 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
SDK2-202ENST00000410094 NESP48681 1621 aa21.41■■□□□ 1.02
SDK2-202ENST00000410094 EHMT2Q96KQ7 1210 aa21.38■■□□□ 1.01
SDK2-202ENST00000410094 PDS5BQ9NTI5 1447 aa21.33■■□□□ 1
SDK2-202ENST00000410094 CEP164Q9UPV0 1460 aa21.3■■□□□ 1
SDK2-202ENST00000410094 GOLGA3Q08378 1498 aa21.29■■□□□ 1
SDK2-202ENST00000410094 DNMBPQ6XZF7 1577 aa21.28■■□□□ 1
SDK2-202ENST00000410094 KIF21BO75037 1637 aa21.28■■□□□ 1
SDK2-202ENST00000410094 KIF27Q86VH2 1401 aa21.26■□□□□ 0.99
SDK2-202ENST00000410094 TNIKQ9UKE5 1360 aa21.25■□□□□ 0.99
SDK2-202ENST00000410094 FGD5Q6ZNL6 1462 aa21.24■□□□□ 0.99
SDK2-202ENST00000410094 TOPBP1Q92547 1522 aa21.22■□□□□ 0.99
SDK2-202ENST00000410094 UBTFP17480 764 aaKnown RBP21.2■□□□□ 0.98
SDK2-202ENST00000410094 KIF21AQ7Z4S6 1674 aa21.16■□□□□ 0.98
SDK2-202ENST00000410094 CUX2O14529 1486 aa21.15■□□□□ 0.98
SDK2-202ENST00000410094 URB2Q14146 1524 aaKnown RBP21.15■□□□□ 0.98
SDK2-202ENST00000410094 CEP162Q5TB80 1403 aa21.13■□□□□ 0.97
SDK2-202ENST00000410094 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
SDK2-202ENST00000410094 PRXQ9BXM0 1461 aa21.13■□□□□ 0.97
SDK2-202ENST00000410094 ERICH3Q5RHP9 1530 aa21.12■□□□□ 0.97
SDK2-202ENST00000410094 RAPGEF2Q9Y4G8 1499 aa21.11■□□□□ 0.97
SDK2-202ENST00000410094 ABCA10Q8WWZ4 1543 aa21.08■□□□□ 0.96
SDK2-202ENST00000410094 ERCC6Q03468 1493 aa21.05■□□□□ 0.96
SDK2-202ENST00000410094 RAD54L2Q9Y4B4 1467 aa21.05■□□□□ 0.96
SDK2-202ENST00000410094 IGF1RP08069 1367 aa21.04■□□□□ 0.96
SDK2-202ENST00000410094 MRC2Q9UBG0 1479 aa21.02■□□□□ 0.96
SDK2-202ENST00000410094 WDR97A6NE52 1622 aa20.96■□□□□ 0.95
SDK2-202ENST00000410094 CARMIL1Q5VZK9 1371 aa20.95■□□□□ 0.94
SDK2-202ENST00000410094 CLIP1P30622 1438 aa20.94■□□□□ 0.94
SDK2-202ENST00000410094 TRIM26Q12899 539 aaPredicted RBP20.9■□□□□ 0.94
SDK2-202ENST00000410094 PCGF6Q9BYE7 350 aa20.9■□□□□ 0.94
SDK2-202ENST00000410094 WDR62O43379 1518 aa20.89■□□□□ 0.94
SDK2-202ENST00000410094 DNAJC5Q9H3Z4 198 aa20.89■□□□□ 0.93
SDK2-202ENST00000410094 TARBP1Q13395 1621 aaKnown RBP20.88■□□□□ 0.93
SDK2-202ENST00000410094 ABCA5Q8WWZ7 1642 aa20.88■□□□□ 0.93
SDK2-202ENST00000410094 CUL7Q14999 1698 aa20.87■□□□□ 0.93
SDK2-202ENST00000410094 GAPVD1Q14C86 1478 aa20.85■□□□□ 0.93
SDK2-202ENST00000410094 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
SDK2-202ENST00000410094 THOC2Q8NI27 1593 aaKnown RBP20.8■□□□□ 0.92
SDK2-202ENST00000410094 IFT140Q96RY7 1462 aa20.8■□□□□ 0.92
SDK2-202ENST00000410094 VPS8Q8N3P4 1428 aa20.78■□□□□ 0.92
SDK2-202ENST00000410094 RANGAP1P46060 587 aaPredicted RBP20.76■□□□□ 0.91
SDK2-202ENST00000410094 PBRM1Q86U86 1689 aa20.7■□□□□ 0.9
SDK2-202ENST00000410094 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
SDK2-202ENST00000410094 AQRO60306 1485 aaKnown RBP eCLIP20.68■□□□□ 0.9
SDK2-202ENST00000410094 PPARGC1BQ86YN6 1023 aaKnown RBP20.68■□□□□ 0.9
SDK2-202ENST00000410094 GRIN2BQ13224 1484 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms