RNA–Protein interactions for RNA: ENST00000409760.1

VAMP8-202, Transcript of vesicle associated membrane protein 8, humanhuman

TSL 3 BASIC

Gene VAMP8, Length 805 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP8-202ENST00000409760 NISCHQ9Y2I1 1504 aa23.78■■□□□ 1.4
VAMP8-202ENST00000409760 CCDC180Q9P1Z9 1646 aa21.32■■□□□ 1
VAMP8-202ENST00000409760 ABCC9O60706 1549 aa21.29■■□□□ 1
VAMP8-202ENST00000409760 RB1CC1Q8TDY2 1594 aa20.25■□□□□ 0.83
VAMP8-202ENST00000409760 NACADO15069 1562 aa20.14■□□□□ 0.81
VAMP8-202ENST00000409760 DNAJC5BQ9UF47 199 aa20.02■□□□□ 0.8
VAMP8-202ENST00000409760 MYO15BQ96JP2 1530 aa19.92■□□□□ 0.78
VAMP8-202ENST00000409760 DCAF8L2P0C7V8 631 aa19.89■□□□□ 0.77
VAMP8-202ENST00000409760 UNC13AQ9UPW8 1703 aa19.83■□□□□ 0.77
VAMP8-202ENST00000409760 PABPN1Q86U42 306 aaKnown RBP eCLIP19.8■□□□□ 0.76
VAMP8-202ENST00000409760 BICRAQ9NZM4 1560 aa19.76■□□□□ 0.75
VAMP8-202ENST00000409760 ZCCHC6Q5VYS8 1495 aaKnown RBP19.73■□□□□ 0.75
VAMP8-202ENST00000409760 DCAF1Q9Y4B6 1507 aa19.66■□□□□ 0.74
VAMP8-202ENST00000409760 SHROOM4Q9ULL8 1493 aa19.46■□□□□ 0.71
VAMP8-202ENST00000409760 SCRIBQ14160 1630 aa19.4■□□□□ 0.7
VAMP8-202ENST00000409760 CC2D2AQ9P2K1 1620 aa19.25■□□□□ 0.67
VAMP8-202ENST00000409760 EIF4G1Q04637 1599 aaKnown RBP19.22■□□□□ 0.67
VAMP8-202ENST00000409760 CECR2Q9BXF3 1484 aa19.18■□□□□ 0.66
VAMP8-202ENST00000409760 NCAPD3P42695 1498 aa18.63■□□□□ 0.57
VAMP8-202ENST00000409760 ATAD2BQ9ULI0 1458 aa18.56■□□□□ 0.56
VAMP8-202ENST00000409760 SMARCA4P51532 1647 aa18.54■□□□□ 0.56
VAMP8-202ENST00000409760 HMGXB3Q12766 1538 aa18.49■□□□□ 0.55
VAMP8-202ENST00000409760 SMARCA2P51531 1590 aa18.47■□□□□ 0.55
VAMP8-202ENST00000409760 BAZ1AQ9NRL2 1556 aaPredicted RBP18.42■□□□□ 0.54
VAMP8-202ENST00000409760 PEG3Q9GZU2 1588 aa18.39■□□□□ 0.53
VAMP8-202ENST00000409760 CUX2O14529 1486 aa18.36■□□□□ 0.53
VAMP8-202ENST00000409760 MROH2BQ7Z745 1585 aa18.34■□□□□ 0.53
VAMP8-202ENST00000409760 BAZ1BQ9UIG0 1483 aaKnown RBP18.33■□□□□ 0.53
VAMP8-202ENST00000409760 DNAJC5Q9H3Z4 198 aa18.33■□□□□ 0.52
VAMP8-202ENST00000409760 NESP48681 1621 aa18.33■□□□□ 0.52
VAMP8-202ENST00000409760 ERCC6Q03468 1493 aa18.33■□□□□ 0.52
VAMP8-202ENST00000409760 LAMC3Q9Y6N6 1575 aa18.17■□□□□ 0.5
VAMP8-202ENST00000409760 THOC2Q8NI27 1593 aaKnown RBP18.16■□□□□ 0.5
VAMP8-202ENST00000409760 WIZO95785 1651 aa18.08■□□□□ 0.48
VAMP8-202ENST00000409760 KIF21AQ7Z4S6 1674 aa18.06■□□□□ 0.48
VAMP8-202ENST00000409760 PDS5BQ9NTI5 1447 aa18.03■□□□□ 0.48
VAMP8-202ENST00000409760 CADPSQ9ULU8 1353 aa18.03■□□□□ 0.48
VAMP8-202ENST00000409760 RSF1Q96T23 1441 aaPredicted RBP17.95■□□□□ 0.46
VAMP8-202ENST00000409760 MRC2Q9UBG0 1479 aa17.91■□□□□ 0.46
VAMP8-202ENST00000409760 WDR62O43379 1518 aa17.9■□□□□ 0.46
VAMP8-202ENST00000409760 TOP2AP11388 1531 aaKnown RBP17.87■□□□□ 0.45
VAMP8-202ENST00000409760 CFTRP13569 1480 aa17.85■□□□□ 0.45
VAMP8-202ENST00000409760 CEP164Q9UPV0 1460 aa17.82■□□□□ 0.44
VAMP8-202ENST00000409760 FANCD2Q9BXW9 1451 aa17.82■□□□□ 0.44
VAMP8-202ENST00000409760 URB2Q14146 1524 aaKnown RBP17.72■□□□□ 0.43
VAMP8-202ENST00000409760 CCDC88BA6NC98 1476 aa17.66■□□□□ 0.42
VAMP8-202ENST00000409760 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
VAMP8-202ENST00000409760 TOPBP1Q92547 1522 aa17.5■□□□□ 0.39
VAMP8-202ENST00000409760 ZNF608Q9ULD9 1512 aaPredicted RBP17.48■□□□□ 0.39
VAMP8-202ENST00000409760 IFT140Q96RY7 1462 aa17.48■□□□□ 0.39
VAMP8-202ENST00000409760 OSCARQ8IYS5 282 aa17.45■□□□□ 0.38
VAMP8-202ENST00000409760 TRIM41Q8WV44 630 aa17.44■□□□□ 0.38
VAMP8-202ENST00000409760 DNMBPQ6XZF7 1577 aa17.43■□□□□ 0.38
VAMP8-202ENST00000409760 ABCC8Q09428 1581 aa17.4■□□□□ 0.38
VAMP8-202ENST00000409760 EIF4G3O43432 1585 aaKnown RBP17.37■□□□□ 0.37
VAMP8-202ENST00000409760 TARBP1Q13395 1621 aaKnown RBP17.37■□□□□ 0.37
VAMP8-202ENST00000409760 POLA1P09884 1462 aaPredicted RBP17.33■□□□□ 0.37
VAMP8-202ENST00000409760 AQRO60306 1485 aaKnown RBP eCLIP17.3■□□□□ 0.36
VAMP8-202ENST00000409760 RIMBP3CA6NJZ7 1639 aa17.29■□□□□ 0.36
VAMP8-202ENST00000409760 RIMBP3BA6NNM3 1639 aa17.29■□□□□ 0.36
VAMP8-202ENST00000409760 RIMBP3Q9UFD9 1639 aa17.29■□□□□ 0.36
VAMP8-202ENST00000409760 RAD54L2Q9Y4B4 1467 aa17.25■□□□□ 0.35
VAMP8-202ENST00000409760 ARHGEF11O15085 1522 aa17.25■□□□□ 0.35
VAMP8-202ENST00000409760 CUX1P39880 1505 aa17.22■□□□□ 0.35
VAMP8-202ENST00000409760 CHD1O14646 1710 aa17.22■□□□□ 0.35
VAMP8-202ENST00000409760 FGD5Q6ZNL6 1462 aa17.2■□□□□ 0.34
VAMP8-202ENST00000409760 SOGA1O94964 1423 aa17.2■□□□□ 0.34
VAMP8-202ENST00000409760 TDRD9Q8NDG6 1382 aaKnown RBP17.18■□□□□ 0.34
VAMP8-202ENST00000409760 WDR97A6NE52 1622 aa17.16■□□□□ 0.34
VAMP8-202ENST00000409760 SNAPC4Q5SXM2 1469 aa17.12■□□□□ 0.33
VAMP8-202ENST00000409760 SUPT5HO00267 1087 aaKnown RBP17.12■□□□□ 0.33
VAMP8-202ENST00000409760 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
VAMP8-202ENST00000409760 CLASP1Q7Z460 1538 aa17.08■□□□□ 0.32
VAMP8-202ENST00000409760 GRIN2BQ13224 1484 aa17.07■□□□□ 0.32
VAMP8-202ENST00000409760 MAGI1Q96QZ7 1491 aaPredicted RBP17.07■□□□□ 0.32
VAMP8-202ENST00000409760 FBLN2P98095 1184 aa17.07■□□□□ 0.32
VAMP8-202ENST00000409760 CYB5RLQ6IPT4 315 aa17.04■□□□□ 0.32
VAMP8-202ENST00000409760 ABCA10Q8WWZ4 1543 aa17.02■□□□□ 0.32
VAMP8-202ENST00000409760 SYNJ2O15056 1496 aa17.02■□□□□ 0.32
VAMP8-202ENST00000409760 ABCA5Q8WWZ7 1642 aa17.02■□□□□ 0.31
VAMP8-202ENST00000409760 GAPVD1Q14C86 1478 aa17■□□□□ 0.31
VAMP8-202ENST00000409760 PBRM1Q86U86 1689 aa17■□□□□ 0.31
VAMP8-202ENST00000409760 SYNJ1O43426 1573 aa16.99■□□□□ 0.31
VAMP8-202ENST00000409760 CHMP7Q8WUX9 453 aaPredicted RBP16.97■□□□□ 0.31
VAMP8-202ENST00000409760 BIVM-ERCC5R4GMW8 1640 aa16.93■□□□□ 0.3
VAMP8-202ENST00000409760 TOP2BQ02880 1626 aa16.92■□□□□ 0.3
VAMP8-202ENST00000409760 WRNQ14191 1432 aaPredicted RBP eCLIP16.91■□□□□ 0.3
VAMP8-202ENST00000409760 ADAMTS12P58397 1594 aa16.88■□□□□ 0.29
VAMP8-202ENST00000409760 GRIN2AQ12879 1464 aa16.86■□□□□ 0.29
VAMP8-202ENST00000409760 NUP160Q12769 1436 aa16.84■□□□□ 0.29
VAMP8-202ENST00000409760 CEP170Q5SW79 1584 aa16.83■□□□□ 0.28
VAMP8-202ENST00000409760 ERCC6L2Q5T890 1561 aa16.81■□□□□ 0.28
VAMP8-202ENST00000409760 ERICH3Q5RHP9 1530 aa16.8■□□□□ 0.28
VAMP8-202ENST00000409760 FHAD1B1AJZ9 1412 aa16.79■□□□□ 0.28
VAMP8-202ENST00000409760 TRHP20396 242 aaPredicted RBP16.79■□□□□ 0.28
VAMP8-202ENST00000409760 SHROOM2Q13796 1616 aa16.77■□□□□ 0.27
VAMP8-202ENST00000409760 RUSC2Q8N2Y8 1516 aa16.64■□□□□ 0.25
VAMP8-202ENST00000409760 PRG4Q92954 1404 aaPredicted RBP16.62■□□□□ 0.25
VAMP8-202ENST00000409760 IGF1RP08069 1367 aa16.59■□□□□ 0.25
VAMP8-202ENST00000409760 JPH4Q96JJ6 628 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms