RNA–Protein interactions for RNA: ENST00000409632.6

ALS2-202, Transcript of ALS2, alsin Rho guanine nucleotide exchange factor, humanhuman

TSL 4

Gene ALS2, Length 571 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALS2-202ENST00000409632 NISCHQ9Y2I1 1504 aa19.66■□□□□ 0.74
ALS2-202ENST00000409632 ABCC9O60706 1549 aa17.5■□□□□ 0.39
ALS2-202ENST00000409632 CCDC180Q9P1Z9 1646 aa17.48■□□□□ 0.39
ALS2-202ENST00000409632 DCAF8L2P0C7V8 631 aa16.62■□□□□ 0.25
ALS2-202ENST00000409632 RB1CC1Q8TDY2 1594 aa16.61■□□□□ 0.25
ALS2-202ENST00000409632 NACADO15069 1562 aa16.54■□□□□ 0.24
ALS2-202ENST00000409632 DNAJC5BQ9UF47 199 aa16.47■□□□□ 0.23
ALS2-202ENST00000409632 PABPN1Q86U42 306 aaKnown RBP eCLIP16.38■□□□□ 0.21
ALS2-202ENST00000409632 MYO15BQ96JP2 1530 aa16.35■□□□□ 0.21
ALS2-202ENST00000409632 UNC13AQ9UPW8 1703 aa16.3■□□□□ 0.2
ALS2-202ENST00000409632 ZCCHC6Q5VYS8 1495 aaKnown RBP16.29■□□□□ 0.2
ALS2-202ENST00000409632 BICRAQ9NZM4 1560 aa16.23■□□□□ 0.19
ALS2-202ENST00000409632 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
ALS2-202ENST00000409632 SCRIBQ14160 1630 aa16.01■□□□□ 0.15
ALS2-202ENST00000409632 SHROOM4Q9ULL8 1493 aa15.86■□□□□ 0.13
ALS2-202ENST00000409632 CC2D2AQ9P2K1 1620 aa15.78■□□□□ 0.12
ALS2-202ENST00000409632 EIF4G1Q04637 1599 aaKnown RBP15.76■□□□□ 0.11
ALS2-202ENST00000409632 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
ALS2-202ENST00000409632 NCAPD3P42695 1498 aa15.33■□□□□ 0.05
ALS2-202ENST00000409632 ATAD2BQ9ULI0 1458 aa15.31■□□□□ 0.04
ALS2-202ENST00000409632 SMARCA4P51532 1647 aa15.28■□□□□ 0.04
ALS2-202ENST00000409632 SMARCA2P51531 1590 aa15.19■□□□□ 0.02
ALS2-202ENST00000409632 MROH2BQ7Z745 1585 aa15.19■□□□□ 0.02
ALS2-202ENST00000409632 BAZ1AQ9NRL2 1556 aaPredicted RBP15.19■□□□□ 0.02
ALS2-202ENST00000409632 HMGXB3Q12766 1538 aa15.15■□□□□ 0.02
ALS2-202ENST00000409632 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
ALS2-202ENST00000409632 BAZ1BQ9UIG0 1483 aaKnown RBP15.11■□□□□ 0.01
ALS2-202ENST00000409632 NESP48681 1621 aa15.1■□□□□ 0.01
ALS2-202ENST00000409632 ERCC6Q03468 1493 aa15.01□□□□□ -0.01
ALS2-202ENST00000409632 WIZO95785 1651 aa14.99□□□□□ -0.01
ALS2-202ENST00000409632 CUX2O14529 1486 aa14.95□□□□□ -0.02
ALS2-202ENST00000409632 DNAJC5Q9H3Z4 198 aa14.94□□□□□ -0.02
ALS2-202ENST00000409632 RSF1Q96T23 1441 aaPredicted RBP14.92□□□□□ -0.02
ALS2-202ENST00000409632 LAMC3Q9Y6N6 1575 aa14.9□□□□□ -0.02
ALS2-202ENST00000409632 CADPSQ9ULU8 1353 aa14.87□□□□□ -0.03
ALS2-202ENST00000409632 THOC2Q8NI27 1593 aaKnown RBP14.83□□□□□ -0.04
ALS2-202ENST00000409632 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
ALS2-202ENST00000409632 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
ALS2-202ENST00000409632 TOP2AP11388 1531 aaKnown RBP14.75□□□□□ -0.05
ALS2-202ENST00000409632 CFTRP13569 1480 aa14.72□□□□□ -0.05
ALS2-202ENST00000409632 MRC2Q9UBG0 1479 aa14.69□□□□□ -0.06
ALS2-202ENST00000409632 FANCD2Q9BXW9 1451 aa14.68□□□□□ -0.06
ALS2-202ENST00000409632 CCDC88BA6NC98 1476 aa14.66□□□□□ -0.06
ALS2-202ENST00000409632 CEP164Q9UPV0 1460 aa14.65□□□□□ -0.06
ALS2-202ENST00000409632 WDR62O43379 1518 aa14.65□□□□□ -0.06
ALS2-202ENST00000409632 URB2Q14146 1524 aaKnown RBP14.59□□□□□ -0.07
ALS2-202ENST00000409632 PRDM2Q13029 1718 aa14.47□□□□□ -0.09
ALS2-202ENST00000409632 TOPBP1Q92547 1522 aa14.43□□□□□ -0.1
ALS2-202ENST00000409632 ZNF608Q9ULD9 1512 aaPredicted RBP14.41□□□□□ -0.1
ALS2-202ENST00000409632 SUPT5HO00267 1087 aaKnown RBP14.38□□□□□ -0.11
ALS2-202ENST00000409632 OSCARQ8IYS5 282 aa14.37□□□□□ -0.11
ALS2-202ENST00000409632 IFT140Q96RY7 1462 aa14.37□□□□□ -0.11
ALS2-202ENST00000409632 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
ALS2-202ENST00000409632 DNMBPQ6XZF7 1577 aa14.34□□□□□ -0.11
ALS2-202ENST00000409632 TRIM41Q8WV44 630 aa14.31□□□□□ -0.12
ALS2-202ENST00000409632 AQRO60306 1485 aaKnown RBP eCLIP14.3□□□□□ -0.12
ALS2-202ENST00000409632 TARBP1Q13395 1621 aaKnown RBP14.29□□□□□ -0.12
ALS2-202ENST00000409632 POLA1P09884 1462 aaPredicted RBP14.28□□□□□ -0.12
ALS2-202ENST00000409632 RAD54L2Q9Y4B4 1467 aa14.28□□□□□ -0.12
ALS2-202ENST00000409632 SOGA1O94964 1423 aa14.24□□□□□ -0.13
ALS2-202ENST00000409632 TDRD9Q8NDG6 1382 aaKnown RBP14.24□□□□□ -0.13
ALS2-202ENST00000409632 EIF4G3O43432 1585 aaKnown RBP14.24□□□□□ -0.13
ALS2-202ENST00000409632 CUX1P39880 1505 aa14.24□□□□□ -0.13
ALS2-202ENST00000409632 FGD5Q6ZNL6 1462 aa14.21□□□□□ -0.13
ALS2-202ENST00000409632 FBLN2P98095 1184 aa14.16□□□□□ -0.14
ALS2-202ENST00000409632 RIMBP3CA6NJZ7 1639 aa14.13□□□□□ -0.15
ALS2-202ENST00000409632 RIMBP3BA6NNM3 1639 aa14.13□□□□□ -0.15
ALS2-202ENST00000409632 RIMBP3Q9UFD9 1639 aa14.13□□□□□ -0.15
ALS2-202ENST00000409632 CHD1O14646 1710 aa14.12□□□□□ -0.15
ALS2-202ENST00000409632 ARHGEF11O15085 1522 aa14.1□□□□□ -0.15
ALS2-202ENST00000409632 SNAPC4Q5SXM2 1469 aa14.09□□□□□ -0.15
ALS2-202ENST00000409632 CYB5RLQ6IPT4 315 aa14.07□□□□□ -0.16
ALS2-202ENST00000409632 GRIN2BQ13224 1484 aa14.06□□□□□ -0.16
ALS2-202ENST00000409632 WDR97A6NE52 1622 aa14.06□□□□□ -0.16
ALS2-202ENST00000409632 CHMP7Q8WUX9 453 aaPredicted RBP14.06□□□□□ -0.16
ALS2-202ENST00000409632 GAPVD1Q14C86 1478 aa14.05□□□□□ -0.16
ALS2-202ENST00000409632 ABCA10Q8WWZ4 1543 aa14.05□□□□□ -0.16
ALS2-202ENST00000409632 MAGI1Q96QZ7 1491 aaPredicted RBP14.02□□□□□ -0.16
ALS2-202ENST00000409632 WRNQ14191 1432 aaPredicted RBP eCLIP14.02□□□□□ -0.16
ALS2-202ENST00000409632 SYNJ1O43426 1573 aa14.01□□□□□ -0.17
ALS2-202ENST00000409632 SYNJ2O15056 1496 aa13.99□□□□□ -0.17
ALS2-202ENST00000409632 ARAP1Q96P48 1450 aa13.99□□□□□ -0.17
ALS2-202ENST00000409632 TOP2BQ02880 1626 aa13.99□□□□□ -0.17
ALS2-202ENST00000409632 ABCA5Q8WWZ7 1642 aa13.99□□□□□ -0.17
ALS2-202ENST00000409632 CLASP1Q7Z460 1538 aa13.99□□□□□ -0.17
ALS2-202ENST00000409632 BIVM-ERCC5R4GMW8 1640 aa13.98□□□□□ -0.17
ALS2-202ENST00000409632 PBRM1Q86U86 1689 aa13.98□□□□□ -0.17
ALS2-202ENST00000409632 GRIN2AQ12879 1464 aa13.88□□□□□ -0.19
ALS2-202ENST00000409632 FHAD1B1AJZ9 1412 aa13.87□□□□□ -0.19
ALS2-202ENST00000409632 ADAMTS12P58397 1594 aa13.87□□□□□ -0.19
ALS2-202ENST00000409632 CEP170Q5SW79 1584 aa13.85□□□□□ -0.19
ALS2-202ENST00000409632 ERCC6L2Q5T890 1561 aa13.85□□□□□ -0.19
ALS2-202ENST00000409632 NUP160Q12769 1436 aa13.85□□□□□ -0.19
ALS2-202ENST00000409632 ERICH3Q5RHP9 1530 aa13.84□□□□□ -0.19
ALS2-202ENST00000409632 TRHP20396 242 aaPredicted RBP13.82□□□□□ -0.2
ALS2-202ENST00000409632 IGF1RP08069 1367 aa13.81□□□□□ -0.2
ALS2-202ENST00000409632 JPH4Q96JJ6 628 aa13.78□□□□□ -0.2
ALS2-202ENST00000409632 SHROOM2Q13796 1616 aa13.75□□□□□ -0.21
ALS2-202ENST00000409632 KIF27Q86VH2 1401 aa13.73□□□□□ -0.21
ALS2-202ENST00000409632 PRG4Q92954 1404 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 210.6 ms