RNA–Protein interactions for RNA: ENST00000409171.5

AGFG1-203, Transcript of ArfGAP with FG repeats 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene AGFG1, Length 1,783 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGFG1-203ENST00000409171 NISCHQ9Y2I1 1504 aa29.57■■■□□ 2.32
AGFG1-203ENST00000409171 CCDC180Q9P1Z9 1646 aa26.44■■□□□ 1.82
AGFG1-203ENST00000409171 ABCC9O60706 1549 aa26.24■■□□□ 1.79
AGFG1-203ENST00000409171 RB1CC1Q8TDY2 1594 aa25.06■■□□□ 1.6
AGFG1-203ENST00000409171 DCAF8L2P0C7V8 631 aa24.97■■□□□ 1.59
AGFG1-203ENST00000409171 NACADO15069 1562 aa24.91■■□□□ 1.58
AGFG1-203ENST00000409171 MYO15BQ96JP2 1530 aa24.59■■□□□ 1.53
AGFG1-203ENST00000409171 ZCCHC6Q5VYS8 1495 aaKnown RBP24.56■■□□□ 1.52
AGFG1-203ENST00000409171 UNC13AQ9UPW8 1703 aa24.53■■□□□ 1.52
AGFG1-203ENST00000409171 PABPN1Q86U42 306 aaKnown RBP eCLIP24.46■■□□□ 1.51
AGFG1-203ENST00000409171 DCAF1Q9Y4B6 1507 aa24.39■■□□□ 1.49
AGFG1-203ENST00000409171 DNAJC5BQ9UF47 199 aa24.31■■□□□ 1.48
AGFG1-203ENST00000409171 BICRAQ9NZM4 1560 aa24.28■■□□□ 1.48
AGFG1-203ENST00000409171 SCRIBQ14160 1630 aa24.19■■□□□ 1.46
AGFG1-203ENST00000409171 SHROOM4Q9ULL8 1493 aa23.94■■□□□ 1.42
AGFG1-203ENST00000409171 EIF4G1Q04637 1599 aaKnown RBP23.7■■□□□ 1.38
AGFG1-203ENST00000409171 CC2D2AQ9P2K1 1620 aa23.69■■□□□ 1.38
AGFG1-203ENST00000409171 CECR2Q9BXF3 1484 aa23.58■■□□□ 1.36
AGFG1-203ENST00000409171 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
AGFG1-203ENST00000409171 BAZ1AQ9NRL2 1556 aaPredicted RBP22.96■■□□□ 1.27
AGFG1-203ENST00000409171 NCAPD3P42695 1498 aa22.96■■□□□ 1.27
AGFG1-203ENST00000409171 ATAD2BQ9ULI0 1458 aa22.96■■□□□ 1.27
AGFG1-203ENST00000409171 SMARCA2P51531 1590 aa22.94■■□□□ 1.26
AGFG1-203ENST00000409171 HMGXB3Q12766 1538 aa22.86■■□□□ 1.25
AGFG1-203ENST00000409171 BAZ1BQ9UIG0 1483 aaKnown RBP22.81■■□□□ 1.24
AGFG1-203ENST00000409171 MROH2BQ7Z745 1585 aa22.81■■□□□ 1.24
AGFG1-203ENST00000409171 PEG3Q9GZU2 1588 aa22.76■■□□□ 1.23
AGFG1-203ENST00000409171 ERCC6Q03468 1493 aa22.66■■□□□ 1.22
AGFG1-203ENST00000409171 NESP48681 1621 aa22.6■■□□□ 1.21
AGFG1-203ENST00000409171 WIZO95785 1651 aa22.59■■□□□ 1.21
AGFG1-203ENST00000409171 LAMC3Q9Y6N6 1575 aa22.46■■□□□ 1.19
AGFG1-203ENST00000409171 CUX2O14529 1486 aa22.44■■□□□ 1.18
AGFG1-203ENST00000409171 RSF1Q96T23 1441 aaPredicted RBP22.41■■□□□ 1.18
AGFG1-203ENST00000409171 KIF21AQ7Z4S6 1674 aa22.35■■□□□ 1.17
AGFG1-203ENST00000409171 PDS5BQ9NTI5 1447 aa22.31■■□□□ 1.16
AGFG1-203ENST00000409171 THOC2Q8NI27 1593 aaKnown RBP22.3■■□□□ 1.16
AGFG1-203ENST00000409171 CADPSQ9ULU8 1353 aa22.3■■□□□ 1.16
AGFG1-203ENST00000409171 TOP2AP11388 1531 aaKnown RBP22.29■■□□□ 1.16
AGFG1-203ENST00000409171 MRC2Q9UBG0 1479 aa22.12■■□□□ 1.13
AGFG1-203ENST00000409171 CEP164Q9UPV0 1460 aa22.11■■□□□ 1.13
AGFG1-203ENST00000409171 DNAJC5Q9H3Z4 198 aa22.1■■□□□ 1.13
AGFG1-203ENST00000409171 CFTRP13569 1480 aa22.1■■□□□ 1.13
AGFG1-203ENST00000409171 FANCD2Q9BXW9 1451 aa22.09■■□□□ 1.13
AGFG1-203ENST00000409171 WDR62O43379 1518 aa22.04■■□□□ 1.12
AGFG1-203ENST00000409171 CCDC88BA6NC98 1476 aa22.02■■□□□ 1.12
AGFG1-203ENST00000409171 PRDM2Q13029 1718 aa21.99■■□□□ 1.11
AGFG1-203ENST00000409171 URB2Q14146 1524 aaKnown RBP21.88■■□□□ 1.09
AGFG1-203ENST00000409171 SUPT5HO00267 1087 aaKnown RBP21.8■■□□□ 1.08
AGFG1-203ENST00000409171 TOPBP1Q92547 1522 aa21.69■■□□□ 1.06
AGFG1-203ENST00000409171 DNMBPQ6XZF7 1577 aa21.65■■□□□ 1.06
AGFG1-203ENST00000409171 ABCC8Q09428 1581 aa21.64■■□□□ 1.05
AGFG1-203ENST00000409171 IFT140Q96RY7 1462 aa21.62■■□□□ 1.05
AGFG1-203ENST00000409171 ZNF608Q9ULD9 1512 aaPredicted RBP21.58■■□□□ 1.05
AGFG1-203ENST00000409171 EIF4G3O43432 1585 aaKnown RBP21.51■■□□□ 1.03
AGFG1-203ENST00000409171 POLA1P09884 1462 aaPredicted RBP21.49■■□□□ 1.03
AGFG1-203ENST00000409171 TARBP1Q13395 1621 aaKnown RBP21.48■■□□□ 1.03
AGFG1-203ENST00000409171 OSCARQ8IYS5 282 aa21.48■■□□□ 1.03
AGFG1-203ENST00000409171 CUX1P39880 1505 aa21.42■■□□□ 1.02
AGFG1-203ENST00000409171 AQRO60306 1485 aaKnown RBP eCLIP21.42■■□□□ 1.028e-12■■■■■ 34.1
AGFG1-203ENST00000409171 RAD54L2Q9Y4B4 1467 aa21.42■■□□□ 1.02
AGFG1-203ENST00000409171 FGD5Q6ZNL6 1462 aa21.42■■□□□ 1.02
AGFG1-203ENST00000409171 SOGA1O94964 1423 aa21.4■■□□□ 1.02
AGFG1-203ENST00000409171 TRIM41Q8WV44 630 aa21.38■■□□□ 1.01
AGFG1-203ENST00000409171 TDRD9Q8NDG6 1382 aaKnown RBP21.34■■□□□ 1.01
AGFG1-203ENST00000409171 CHD1O14646 1710 aa21.32■■□□□ 1
AGFG1-203ENST00000409171 FBLN2P98095 1184 aa21.3■■□□□ 1
AGFG1-203ENST00000409171 WDR97A6NE52 1622 aa21.25■□□□□ 0.99
AGFG1-203ENST00000409171 SNAPC4Q5SXM2 1469 aa21.23■□□□□ 0.99
AGFG1-203ENST00000409171 RIMBP3CA6NJZ7 1639 aa21.21■□□□□ 0.99
AGFG1-203ENST00000409171 RIMBP3BA6NNM3 1639 aa21.21■□□□□ 0.99
AGFG1-203ENST00000409171 RIMBP3Q9UFD9 1639 aa21.21■□□□□ 0.99
AGFG1-203ENST00000409171 GRIN2BQ13224 1484 aa21.18■□□□□ 0.98
AGFG1-203ENST00000409171 WRNQ14191 1432 aaPredicted RBP eCLIP21.18■□□□□ 0.98
AGFG1-203ENST00000409171 PBRM1Q86U86 1689 aa21.18■□□□□ 0.98
AGFG1-203ENST00000409171 SYNJ1O43426 1573 aa21.16■□□□□ 0.98
AGFG1-203ENST00000409171 ARHGEF11O15085 1522 aa21.16■□□□□ 0.98
AGFG1-203ENST00000409171 GAPVD1Q14C86 1478 aa21.15■□□□□ 0.98
AGFG1-203ENST00000409171 TOP2BQ02880 1626 aa21.15■□□□□ 0.98
AGFG1-203ENST00000409171 BIVM-ERCC5R4GMW8 1640 aa21.15■□□□□ 0.98
AGFG1-203ENST00000409171 MAGI1Q96QZ7 1491 aaPredicted RBP21.15■□□□□ 0.98
AGFG1-203ENST00000409171 ABCA10Q8WWZ4 1543 aa21.15■□□□□ 0.98
AGFG1-203ENST00000409171 CHMP7Q8WUX9 453 aaPredicted RBP21.13■□□□□ 0.97
AGFG1-203ENST00000409171 ABCA5Q8WWZ7 1642 aa21.12■□□□□ 0.97
AGFG1-203ENST00000409171 SYNJ2O15056 1496 aa21.08■□□□□ 0.97
AGFG1-203ENST00000409171 CLASP1Q7Z460 1538 aa21.01■□□□□ 0.95
AGFG1-203ENST00000409171 CYB5RLQ6IPT4 315 aa21■□□□□ 0.95
AGFG1-203ENST00000409171 ADAMTS12P58397 1594 aa20.96■□□□□ 0.95
AGFG1-203ENST00000409171 ARAP1Q96P48 1450 aa20.96■□□□□ 0.95
AGFG1-203ENST00000409171 GRIN2AQ12879 1464 aa20.92■□□□□ 0.94
AGFG1-203ENST00000409171 ERICH3Q5RHP9 1530 aa20.89■□□□□ 0.94
AGFG1-203ENST00000409171 FHAD1B1AJZ9 1412 aa20.87■□□□□ 0.93
AGFG1-203ENST00000409171 CEP170Q5SW79 1584 aa20.84■□□□□ 0.93
AGFG1-203ENST00000409171 NUP160Q12769 1436 aa20.8■□□□□ 0.92
AGFG1-203ENST00000409171 KIF27Q86VH2 1401 aa20.75■□□□□ 0.91
AGFG1-203ENST00000409171 TRHP20396 242 aaPredicted RBP20.74■□□□□ 0.91
AGFG1-203ENST00000409171 ERCC6L2Q5T890 1561 aa20.74■□□□□ 0.91
AGFG1-203ENST00000409171 SHROOM2Q13796 1616 aa20.69■□□□□ 0.9
AGFG1-203ENST00000409171 IGF1RP08069 1367 aa20.69■□□□□ 0.9
AGFG1-203ENST00000409171 CUL7Q14999 1698 aa20.68■□□□□ 0.9
AGFG1-203ENST00000409171 RUSC2Q8N2Y8 1516 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms