RNA–Protein interactions for RNA: ENST00000409102.5

TMEM139-202, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM139, Length 1,226 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-202ENST00000409102 NISCHQ9Y2I1 1504 aa21.3■■□□□ 1
TMEM139-202ENST00000409102 ABCC9O60706 1549 aa19.41■□□□□ 0.7
TMEM139-202ENST00000409102 CCDC180Q9P1Z9 1646 aa19.27■□□□□ 0.68
TMEM139-202ENST00000409102 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
TMEM139-202ENST00000409102 DNAJC5BQ9UF47 199 aa18.37■□□□□ 0.53
TMEM139-202ENST00000409102 NACADO15069 1562 aa18.24■□□□□ 0.51
TMEM139-202ENST00000409102 UNC13AQ9UPW8 1703 aa18.02■□□□□ 0.48
TMEM139-202ENST00000409102 PABPN1Q86U42 306 aaKnown RBP eCLIP17.98■□□□□ 0.47
TMEM139-202ENST00000409102 MYO15BQ96JP2 1530 aa17.93■□□□□ 0.46
TMEM139-202ENST00000409102 DCAF8L2P0C7V8 631 aa17.93■□□□□ 0.46
TMEM139-202ENST00000409102 BICRAQ9NZM4 1560 aa17.9■□□□□ 0.46
TMEM139-202ENST00000409102 SHROOM4Q9ULL8 1493 aa17.68■□□□□ 0.42
TMEM139-202ENST00000409102 ZCCHC6Q5VYS8 1495 aaKnown RBP17.63■□□□□ 0.41
TMEM139-202ENST00000409102 DCAF1Q9Y4B6 1507 aa17.62■□□□□ 0.41
TMEM139-202ENST00000409102 CC2D2AQ9P2K1 1620 aa17.55■□□□□ 0.4
TMEM139-202ENST00000409102 CECR2Q9BXF3 1484 aa17.52■□□□□ 0.4
TMEM139-202ENST00000409102 SCRIBQ14160 1630 aa17.49■□□□□ 0.39
TMEM139-202ENST00000409102 EIF4G1Q04637 1599 aaKnown RBP17.47■□□□□ 0.39
TMEM139-202ENST00000409102 DNAJC5Q9H3Z4 198 aa17.05■□□□□ 0.32
TMEM139-202ENST00000409102 CUX2O14529 1486 aa16.86■□□□□ 0.29
TMEM139-202ENST00000409102 NCAPD3P42695 1498 aa16.82■□□□□ 0.28
TMEM139-202ENST00000409102 ERCC6Q03468 1493 aa16.77■□□□□ 0.28
TMEM139-202ENST00000409102 ATAD2BQ9ULI0 1458 aa16.73■□□□□ 0.27
TMEM139-202ENST00000409102 HMGXB3Q12766 1538 aa16.71■□□□□ 0.27
TMEM139-202ENST00000409102 SMARCA2P51531 1590 aa16.69■□□□□ 0.26
TMEM139-202ENST00000409102 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
TMEM139-202ENST00000409102 NESP48681 1621 aa16.61■□□□□ 0.25
TMEM139-202ENST00000409102 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
TMEM139-202ENST00000409102 BAZ1BQ9UIG0 1483 aaKnown RBP16.55■□□□□ 0.24
TMEM139-202ENST00000409102 THOC2Q8NI27 1593 aaKnown RBP16.55■□□□□ 0.24
TMEM139-202ENST00000409102 PEG3Q9GZU2 1588 aa16.55■□□□□ 0.24
TMEM139-202ENST00000409102 LAMC3Q9Y6N6 1575 aa16.5■□□□□ 0.23
TMEM139-202ENST00000409102 KIF21AQ7Z4S6 1674 aa16.43■□□□□ 0.22
TMEM139-202ENST00000409102 MROH2BQ7Z745 1585 aa16.39■□□□□ 0.21
TMEM139-202ENST00000409102 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
TMEM139-202ENST00000409102 CADPSQ9ULU8 1353 aa16.27■□□□□ 0.2
TMEM139-202ENST00000409102 MRC2Q9UBG0 1479 aa16.27■□□□□ 0.19
TMEM139-202ENST00000409102 WDR62O43379 1518 aa16.26■□□□□ 0.19
TMEM139-202ENST00000409102 WIZO95785 1651 aa16.19■□□□□ 0.18
TMEM139-202ENST00000409102 TRIM41Q8WV44 630 aa16.16■□□□□ 0.18
TMEM139-202ENST00000409102 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
TMEM139-202ENST00000409102 FANCD2Q9BXW9 1451 aa16.1■□□□□ 0.17
TMEM139-202ENST00000409102 CFTRP13569 1480 aa16.07■□□□□ 0.16
TMEM139-202ENST00000409102 TOP2AP11388 1531 aaKnown RBP15.99■□□□□ 0.15
TMEM139-202ENST00000409102 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
TMEM139-202ENST00000409102 OSCARQ8IYS5 282 aa15.97■□□□□ 0.15
TMEM139-202ENST00000409102 RSF1Q96T23 1441 aaPredicted RBP15.96■□□□□ 0.15
TMEM139-202ENST00000409102 PRDM2Q13029 1718 aa15.94■□□□□ 0.14
TMEM139-202ENST00000409102 RIMBP3CA6NJZ7 1639 aa15.86■□□□□ 0.13
TMEM139-202ENST00000409102 RIMBP3BA6NNM3 1639 aa15.86■□□□□ 0.13
TMEM139-202ENST00000409102 RIMBP3Q9UFD9 1639 aa15.86■□□□□ 0.13
TMEM139-202ENST00000409102 IFT140Q96RY7 1462 aa15.84■□□□□ 0.13
TMEM139-202ENST00000409102 ZNF608Q9ULD9 1512 aaPredicted RBP15.83■□□□□ 0.12
TMEM139-202ENST00000409102 ARHGEF11O15085 1522 aa15.79■□□□□ 0.12
TMEM139-202ENST00000409102 TOPBP1Q92547 1522 aa15.78■□□□□ 0.12
TMEM139-202ENST00000409102 CCDC88BA6NC98 1476 aa15.78■□□□□ 0.12
TMEM139-202ENST00000409102 EIF4G3O43432 1585 aaKnown RBP15.77■□□□□ 0.11
TMEM139-202ENST00000409102 ABCC8Q09428 1581 aa15.73■□□□□ 0.11
TMEM139-202ENST00000409102 DNMBPQ6XZF7 1577 aa15.72■□□□□ 0.11
TMEM139-202ENST00000409102 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
TMEM139-202ENST00000409102 CHD1O14646 1710 aa15.68■□□□□ 0.1
TMEM139-202ENST00000409102 AQRO60306 1485 aaKnown RBP eCLIP15.63■□□□□ 0.09
TMEM139-202ENST00000409102 ARAP1Q96P48 1450 aa15.62■□□□□ 0.09
TMEM139-202ENST00000409102 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
TMEM139-202ENST00000409102 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
TMEM139-202ENST00000409102 WDR97A6NE52 1622 aa15.54■□□□□ 0.08
TMEM139-202ENST00000409102 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
TMEM139-202ENST00000409102 FBLN2P98095 1184 aa15.51■□□□□ 0.07
TMEM139-202ENST00000409102 CLASP1Q7Z460 1538 aa15.51■□□□□ 0.07
TMEM139-202ENST00000409102 SNAPC4Q5SXM2 1469 aa15.49■□□□□ 0.07
TMEM139-202ENST00000409102 SOGA1O94964 1423 aa15.49■□□□□ 0.07
TMEM139-202ENST00000409102 TDRD9Q8NDG6 1382 aaKnown RBP15.49■□□□□ 0.07
TMEM139-202ENST00000409102 TRHP20396 242 aaPredicted RBP15.48■□□□□ 0.07
TMEM139-202ENST00000409102 FGD5Q6ZNL6 1462 aa15.47■□□□□ 0.07
TMEM139-202ENST00000409102 MAGI1Q96QZ7 1491 aaPredicted RBP15.46■□□□□ 0.07
TMEM139-202ENST00000409102 SYNJ1O43426 1573 aa15.45■□□□□ 0.06
TMEM139-202ENST00000409102 CUX1P39880 1505 aa15.43■□□□□ 0.06
TMEM139-202ENST00000409102 GRIN2BQ13224 1484 aa15.42■□□□□ 0.06
TMEM139-202ENST00000409102 SYNJ2O15056 1496 aa15.4■□□□□ 0.06
TMEM139-202ENST00000409102 CHMP7Q8WUX9 453 aaPredicted RBP15.38■□□□□ 0.05
TMEM139-202ENST00000409102 PBRM1Q86U86 1689 aa15.37■□□□□ 0.05
TMEM139-202ENST00000409102 GAPVD1Q14C86 1478 aa15.33■□□□□ 0.04
TMEM139-202ENST00000409102 ABCA5Q8WWZ7 1642 aa15.32■□□□□ 0.04
TMEM139-202ENST00000409102 ABCA10Q8WWZ4 1543 aa15.3■□□□□ 0.04
TMEM139-202ENST00000409102 GRIN2AQ12879 1464 aa15.23■□□□□ 0.03
TMEM139-202ENST00000409102 ADAMTS12P58397 1594 aa15.22■□□□□ 0.03
TMEM139-202ENST00000409102 ERCC6L2Q5T890 1561 aa15.22■□□□□ 0.03
TMEM139-202ENST00000409102 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
TMEM139-202ENST00000409102 NUP160Q12769 1436 aa15.19■□□□□ 0.02
TMEM139-202ENST00000409102 AEBP2Q6ZN18 517 aaPredicted RBP15.19■□□□□ 0.02
TMEM139-202ENST00000409102 SHROOM2Q13796 1616 aa15.18■□□□□ 0.02
TMEM139-202ENST00000409102 WRNQ14191 1432 aaPredicted RBP eCLIP15.17■□□□□ 0.02
TMEM139-202ENST00000409102 BIVM-ERCC5R4GMW8 1640 aa15.14■□□□□ 0.01
TMEM139-202ENST00000409102 TOP2BQ02880 1626 aa15.14■□□□□ 0.01
TMEM139-202ENST00000409102 FHAD1B1AJZ9 1412 aa15.12■□□□□ 0.01
TMEM139-202ENST00000409102 ERICH3Q5RHP9 1530 aa15.11■□□□□ 0.01
TMEM139-202ENST00000409102 KIF13AQ9H1H9 1805 aa15.1■□□□□ 0.01
TMEM139-202ENST00000409102 RUSC2Q8N2Y8 1516 aa15.02■□□□□ -0
TMEM139-202ENST00000409102 PRG4Q92954 1404 aaPredicted RBP15.02■□□□□ -0
TMEM139-202ENST00000409102 SUPT5HO00267 1087 aaKnown RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms