RNA–Protein interactions for RNA: ENST00000408711.2

U3.41-201, humanhuman

BASIC

Gene U3, Length 219 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.41-201ENST00000408711 NISCHQ9Y2I1 1504 aa31.14■■■□□ 2.57
U3.41-201ENST00000408711 ABCC9O60706 1549 aa28.27■■■□□ 2.12
U3.41-201ENST00000408711 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
U3.41-201ENST00000408711 DNAJC5BQ9UF47 199 aa26.8■■□□□ 1.88
U3.41-201ENST00000408711 RB1CC1Q8TDY2 1594 aa26.8■■□□□ 1.88
U3.41-201ENST00000408711 NACADO15069 1562 aa26.58■■□□□ 1.85
U3.41-201ENST00000408711 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
U3.41-201ENST00000408711 PABPN1Q86U42 306 aaKnown RBP eCLIP26.28■■□□□ 1.8
U3.41-201ENST00000408711 MYO15BQ96JP2 1530 aa26.18■■□□□ 1.78
U3.41-201ENST00000408711 UNC13AQ9UPW8 1703 aa26.17■■□□□ 1.78
U3.41-201ENST00000408711 BICRAQ9NZM4 1560 aa26.07■■□□□ 1.76
U3.41-201ENST00000408711 ZCCHC6Q5VYS8 1495 aaKnown RBP25.77■■□□□ 1.72
U3.41-201ENST00000408711 DCAF1Q9Y4B6 1507 aa25.73■■□□□ 1.71
U3.41-201ENST00000408711 SHROOM4Q9ULL8 1493 aa25.72■■□□□ 1.71
U3.41-201ENST00000408711 CC2D2AQ9P2K1 1620 aa25.53■■□□□ 1.68
U3.41-201ENST00000408711 CECR2Q9BXF3 1484 aa25.51■■□□□ 1.67
U3.41-201ENST00000408711 SCRIBQ14160 1630 aa25.5■■□□□ 1.67
U3.41-201ENST00000408711 EIF4G1Q04637 1599 aaKnown RBP25.44■■□□□ 1.66
U3.41-201ENST00000408711 DNAJC5Q9H3Z4 198 aa24.79■■□□□ 1.56
U3.41-201ENST00000408711 NCAPD3P42695 1498 aa24.58■■□□□ 1.52
U3.41-201ENST00000408711 CUX2O14529 1486 aa24.51■■□□□ 1.51
U3.41-201ENST00000408711 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.5
U3.41-201ENST00000408711 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
U3.41-201ENST00000408711 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
U3.41-201ENST00000408711 SMARCA2P51531 1590 aa24.33■■□□□ 1.49
U3.41-201ENST00000408711 SMARCA4P51532 1647 aa24.32■■□□□ 1.48
U3.41-201ENST00000408711 NESP48681 1621 aa24.23■■□□□ 1.47
U3.41-201ENST00000408711 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
U3.41-201ENST00000408711 BAZ1BQ9UIG0 1483 aaKnown RBP24.16■■□□□ 1.46
U3.41-201ENST00000408711 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
U3.41-201ENST00000408711 THOC2Q8NI27 1593 aaKnown RBP24.04■■□□□ 1.44
U3.41-201ENST00000408711 LAMC3Q9Y6N6 1575 aa24.02■■□□□ 1.44
U3.41-201ENST00000408711 MROH2BQ7Z745 1585 aa23.99■■□□□ 1.43
U3.41-201ENST00000408711 PDS5BQ9NTI5 1447 aa23.89■■□□□ 1.41
U3.41-201ENST00000408711 KIF21AQ7Z4S6 1674 aa23.86■■□□□ 1.41
U3.41-201ENST00000408711 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
U3.41-201ENST00000408711 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
U3.41-201ENST00000408711 WDR62O43379 1518 aa23.68■■□□□ 1.38
U3.41-201ENST00000408711 WIZO95785 1651 aa23.64■■□□□ 1.38
U3.41-201ENST00000408711 CEP164Q9UPV0 1460 aa23.55■■□□□ 1.36
U3.41-201ENST00000408711 TRIM41Q8WV44 630 aa23.51■■□□□ 1.35
U3.41-201ENST00000408711 FANCD2Q9BXW9 1451 aa23.5■■□□□ 1.35
U3.41-201ENST00000408711 CFTRP13569 1480 aa23.48■■□□□ 1.35
U3.41-201ENST00000408711 RSF1Q96T23 1441 aaPredicted RBP23.42■■□□□ 1.34
U3.41-201ENST00000408711 TOP2AP11388 1531 aaKnown RBP23.36■■□□□ 1.33
U3.41-201ENST00000408711 URB2Q14146 1524 aaKnown RBP23.34■■□□□ 1.33
U3.41-201ENST00000408711 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
U3.41-201ENST00000408711 PRDM2Q13029 1718 aa23.13■■□□□ 1.29
U3.41-201ENST00000408711 CCDC88BA6NC98 1476 aa23.1■■□□□ 1.29
U3.41-201ENST00000408711 IFT140Q96RY7 1462 aa23.1■■□□□ 1.29
U3.41-201ENST00000408711 ZNF608Q9ULD9 1512 aaPredicted RBP23.09■■□□□ 1.29
U3.41-201ENST00000408711 TOPBP1Q92547 1522 aa23.04■■□□□ 1.28
U3.41-201ENST00000408711 RIMBP3CA6NJZ7 1639 aa23.03■■□□□ 1.28
U3.41-201ENST00000408711 RIMBP3BA6NNM3 1639 aa23.03■■□□□ 1.28
U3.41-201ENST00000408711 RIMBP3Q9UFD9 1639 aa23.03■■□□□ 1.28
U3.41-201ENST00000408711 ARHGEF11O15085 1522 aa22.96■■□□□ 1.27
U3.41-201ENST00000408711 ABCC8Q09428 1581 aa22.96■■□□□ 1.27
U3.41-201ENST00000408711 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
U3.41-201ENST00000408711 DNMBPQ6XZF7 1577 aa22.92■■□□□ 1.26
U3.41-201ENST00000408711 TARBP1Q13395 1621 aaKnown RBP22.85■■□□□ 1.25
U3.41-201ENST00000408711 AQRO60306 1485 aaKnown RBP eCLIP22.83■■□□□ 1.25
U3.41-201ENST00000408711 POLA1P09884 1462 aaPredicted RBP22.79■■□□□ 1.24
U3.41-201ENST00000408711 CHD1O14646 1710 aa22.77■■□□□ 1.24
U3.41-201ENST00000408711 CYB5RLQ6IPT4 315 aa22.77■■□□□ 1.24
U3.41-201ENST00000408711 ARAP1Q96P48 1450 aa22.73■■□□□ 1.23
U3.41-201ENST00000408711 RAD54L2Q9Y4B4 1467 aa22.7■■□□□ 1.22
U3.41-201ENST00000408711 FBLN2P98095 1184 aa22.67■■□□□ 1.22
U3.41-201ENST00000408711 SOGA1O94964 1423 aa22.65■■□□□ 1.22
U3.41-201ENST00000408711 TDRD9Q8NDG6 1382 aaKnown RBP22.65■■□□□ 1.22
U3.41-201ENST00000408711 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
U3.41-201ENST00000408711 SNAPC4Q5SXM2 1469 aa22.6■■□□□ 1.21
U3.41-201ENST00000408711 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
U3.41-201ENST00000408711 CLASP1Q7Z460 1538 aa22.57■■□□□ 1.2
U3.41-201ENST00000408711 CUX1P39880 1505 aa22.56■■□□□ 1.2
U3.41-201ENST00000408711 TRHP20396 242 aaPredicted RBP22.55■■□□□ 1.2
U3.41-201ENST00000408711 MAGI1Q96QZ7 1491 aaPredicted RBP22.54■■□□□ 1.2
U3.41-201ENST00000408711 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
U3.41-201ENST00000408711 CHMP7Q8WUX9 453 aaPredicted RBP22.49■■□□□ 1.19
U3.41-201ENST00000408711 SYNJ1O43426 1573 aa22.49■■□□□ 1.19
U3.41-201ENST00000408711 SYNJ2O15056 1496 aa22.47■■□□□ 1.19
U3.41-201ENST00000408711 GAPVD1Q14C86 1478 aa22.39■■□□□ 1.17
U3.41-201ENST00000408711 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
U3.41-201ENST00000408711 ABCA10Q8WWZ4 1543 aa22.35■■□□□ 1.17
U3.41-201ENST00000408711 ABCA5Q8WWZ7 1642 aa22.33■■□□□ 1.17
U3.41-201ENST00000408711 GRIN2AQ12879 1464 aa22.22■■□□□ 1.15
U3.41-201ENST00000408711 NUP160Q12769 1436 aa22.2■■□□□ 1.14
U3.41-201ENST00000408711 ERCC6L2Q5T890 1561 aa22.19■■□□□ 1.14
U3.41-201ENST00000408711 WRNQ14191 1432 aaPredicted RBP eCLIP22.18■■□□□ 1.14
U3.41-201ENST00000408711 ADAMTS12P58397 1594 aa22.17■■□□□ 1.14
U3.41-201ENST00000408711 CEP170Q5SW79 1584 aa22.15■■□□□ 1.14
U3.41-201ENST00000408711 FHAD1B1AJZ9 1412 aa22.11■■□□□ 1.13
U3.41-201ENST00000408711 TOP2BQ02880 1626 aa22.1■■□□□ 1.13
U3.41-201ENST00000408711 BIVM-ERCC5R4GMW8 1640 aa22.1■■□□□ 1.13
U3.41-201ENST00000408711 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
U3.41-201ENST00000408711 SUPT5HO00267 1087 aaKnown RBP22.08■■□□□ 1.13
U3.41-201ENST00000408711 AEBP2Q6ZN18 517 aaPredicted RBP22.06■■□□□ 1.12
U3.41-201ENST00000408711 ERICH3Q5RHP9 1530 aa22.06■■□□□ 1.12
U3.41-201ENST00000408711 PRG4Q92954 1404 aaPredicted RBP21.94■■□□□ 1.1
U3.41-201ENST00000408711 JPH4Q96JJ6 628 aa21.92■■□□□ 1.1
U3.41-201ENST00000408711 KIF13AQ9H1H9 1805 aa21.89■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms